SRR4062038_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062038_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	421642
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG	900	0.21345122165249195	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	521	0.12356454053438698	No Hit
ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT	488	0.11573799574046228	No Hit
GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC	459	0.10886012304277089	No Hit
GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT	445	0.10553977070595433	No Hit
ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA	437	0.10364242651348773	No Hit
GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC	424	0.10055924220072952	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTATT	25	0.0023516514	35.1982	29
GTAATAC	40	1.817913E-5	32.99831	3
AGTGCGT	35	3.2153018E-4	31.426962	8
CTTAAGG	30	0.0057422617	29.331833	2
GGATAGC	80	4.296453E-9	27.501854	35
CTTTAGA	40	7.021718E-4	27.501854	39
TGCGCTA	40	7.026589E-4	27.498592	10
GCTAGTT	65	5.912316E-7	27.078749	39
TAGGGCG	50	8.324965E-5	26.401781	31
TCTAGTA	125	1.8189894E-12	24.638737	2
GTACTAC	45	0.0013942285	24.451893	1
TACGGCG	45	0.0013971225	24.443193	7
ATCGTGA	45	0.0013971225	24.443193	15
CGCTATC	45	0.0013971225	24.443193	12
CTACACT	90	1.5073965E-8	24.443193	4
CGGTCGA	45	0.0013971225	24.443193	10
GCGCTAT	45	0.0013971225	24.443193	11
ACAGTCC	65	1.8104776E-5	23.691095	8
TATATTG	65	1.8104776E-5	23.691095	5
CTACACG	65	1.8104776E-5	23.691095	4