##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062038_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 421642 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.197330911057247 32.0 32.0 32.0 32.0 32.0 2 31.473007907181923 32.0 32.0 32.0 32.0 32.0 3 31.598548057356716 32.0 32.0 32.0 32.0 32.0 4 31.688076614758494 32.0 32.0 32.0 32.0 32.0 5 31.667224802083282 32.0 32.0 32.0 32.0 32.0 6 35.31210126125955 36.0 36.0 36.0 36.0 36.0 7 35.32049463763098 36.0 36.0 36.0 36.0 36.0 8 35.2827730634045 36.0 36.0 36.0 36.0 36.0 9 35.334032188444226 36.0 36.0 36.0 36.0 36.0 10 35.25610351909914 36.0 36.0 36.0 36.0 36.0 11 35.34561547473923 36.0 36.0 36.0 36.0 36.0 12 35.28683100829614 36.0 36.0 36.0 36.0 36.0 13 35.31615683447095 36.0 36.0 36.0 36.0 36.0 14 35.27023398997254 36.0 36.0 36.0 36.0 36.0 15 35.2669183809962 36.0 36.0 36.0 36.0 36.0 16 35.27512439462862 36.0 36.0 36.0 36.0 36.0 17 35.25956142888991 36.0 36.0 36.0 36.0 36.0 18 35.26790737165653 36.0 36.0 36.0 36.0 36.0 19 35.22726625905389 36.0 36.0 36.0 36.0 36.0 20 35.20421589879566 36.0 36.0 36.0 36.0 36.0 21 35.19344847050341 36.0 36.0 36.0 36.0 36.0 22 35.18297038720051 36.0 36.0 36.0 36.0 36.0 23 35.173521613122034 36.0 36.0 36.0 36.0 36.0 24 35.157600523667 36.0 36.0 36.0 36.0 36.0 25 35.14346056607264 36.0 36.0 36.0 36.0 36.0 26 35.11320266956328 36.0 36.0 36.0 36.0 36.0 27 35.10361633803084 36.0 36.0 36.0 36.0 36.0 28 35.06871231993018 36.0 36.0 36.0 36.0 36.0 29 35.044976544082424 36.0 36.0 36.0 36.0 36.0 30 35.02745219878475 36.0 36.0 36.0 36.0 36.0 31 35.02417928005275 36.0 36.0 36.0 36.0 36.0 32 34.98802064310481 36.0 36.0 36.0 36.0 36.0 33 34.957674994426554 36.0 36.0 36.0 36.0 36.0 34 34.927974442773724 36.0 36.0 36.0 36.0 36.0 35 34.92244368445269 36.0 36.0 36.0 36.0 36.0 36 34.88548341958344 36.0 36.0 36.0 36.0 36.0 37 34.863324811095666 36.0 36.0 36.0 36.0 36.0 38 34.845290554546274 36.0 36.0 36.0 36.0 36.0 39 34.8000128070733 36.0 36.0 36.0 32.0 36.0 40 34.787589945973124 36.0 36.0 36.0 32.0 36.0 41 34.74381821545292 36.0 36.0 36.0 32.0 36.0 42 34.72617291446298 36.0 36.0 36.0 32.0 36.0 43 34.71287490335403 36.0 36.0 36.0 32.0 36.0 44 34.62702719368564 36.0 36.0 36.0 32.0 36.0 45 34.57977383657226 36.0 36.0 36.0 32.0 36.0 46 34.48716446653796 36.0 36.0 36.0 32.0 36.0 47 34.46012968347556 36.0 36.0 36.0 32.0 36.0 48 34.38988525810996 36.0 36.0 36.0 32.0 36.0 49 34.349571437380526 36.0 36.0 36.0 32.0 36.0 50 33.96085067426869 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 1.0 21 7.0 22 34.0 23 73.0 24 200.0 25 467.0 26 1019.0 27 2024.0 28 3463.0 29 5612.0 30 8432.0 31 11971.0 32 17852.0 33 28955.0 34 63481.0 35 278049.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.319876918405065 21.77509851509695 13.216799641288798 23.68822492520919 2 15.251447396820353 21.00806652451621 39.94625479402019 23.794231284643246 3 18.442035859975334 24.8823641020776 29.99288492552889 26.682715112418176 4 11.554826132121562 17.21673837046594 38.49924817736374 32.729187320048766 5 12.624453920624607 38.73831354561453 34.61562178340867 14.021610750352195 6 30.662030822356407 38.94061787013628 17.229071107716972 13.168280199790344 7 28.299837302735497 32.69977848506553 19.86068750266814 19.139696709530835 8 26.234340981211552 35.57757528898924 19.059533917399122 19.12854981240009 9 25.53659265443196 15.670165685581608 21.259741676588195 37.53349998339824 10 16.352774042372538 27.454161241435248 31.441439518452903 24.751625197739312 11 34.35592279706481 23.930490795508984 22.85445947035637 18.85912693706984 12 23.020714255221254 26.71104870956878 29.369939427286656 20.89829760792331 13 27.596871279426622 21.683086599532306 27.156450258750315 23.56359186229076 14 21.557387546781392 22.677769292432917 26.910269849777773 28.854573311007915 15 24.71433111502175 29.24115719022298 23.51236356909416 22.532148125661106 16 23.376340005692057 28.948866331467606 25.138269613888625 22.536524048951712 17 20.269090840096574 28.696856575009132 27.240644907291017 23.793407677603277 18 20.587942320462954 28.474053695095343 29.146665401764537 21.791338582677167 19 23.593475033322107 26.848843331546668 27.873883531526744 21.68379810360448 20 23.44986244189356 27.469879518072286 27.8299022863106 21.250355753723554 21 24.451548944365125 25.613672262250915 27.33835813320305 22.596420660180915 22 22.919680676972405 27.363260775729177 27.725653516490294 21.991405030808124 23 22.974940826577996 27.370612984474977 27.751030495064533 21.90341569388249 24 22.776938456539632 27.83531805795032 27.404141477147405 21.98360200836264 25 22.814669351415066 27.405304512606698 28.030480906742937 21.7495452292353 26 21.17574791645914 27.58859495586261 29.366660500239544 21.8689966274387 27 21.755918005298398 28.07154021112948 28.39338103629425 21.779160747277874 28 21.455388928285974 27.66078556469726 28.159086219532153 22.724739287484613 29 21.781903476670802 27.13790707216363 27.600150839936532 23.480038611229038 30 22.118235246683142 27.42449612697268 28.2811632837959 22.176105342548276 31 22.523823754025965 26.94728653489486 27.971387778141438 22.557501932937736 32 21.114370892497575 27.78148027805909 28.34144062309522 22.762708206348115 33 22.102452086016303 27.804459243764246 28.32812748285864 21.76496118736081 34 21.99920310787927 26.848386530625795 29.380890716681137 21.771519644813797 35 22.28241019632769 27.70573140246939 27.878152555959794 22.13370584524312 36 21.703957385649435 27.73703758164509 27.665887174427596 22.893117858277876 37 22.538925848186228 27.311537230068662 26.80802115573897 23.341515766006143 38 22.13963504584458 28.079508208385313 27.978474630136468 21.80238211563364 39 22.238745084646073 27.338854657312673 27.626067859158805 22.796332398882456 40 22.84995327789926 27.793720739395035 27.954283491682517 21.40204249102319 41 22.73229642489529 27.318220843472364 28.641630972540426 21.30785175909192 42 21.978848201812536 28.79803803908268 27.421439735875282 21.801674023229502 43 21.370598587373642 28.383686015568298 27.96459421382932 22.281121183228738 44 21.438566698606355 27.82168167199522 28.174836585805497 22.564915043592933 45 22.03783376103445 28.006043155912476 27.913545871537877 22.042577211515198 46 23.472601700060718 27.639268366727382 26.38177367941712 22.506356253794777 47 22.767526800113842 28.459349207855045 26.51385067830377 22.259273313727352 48 22.21218179963902 28.491161661081186 26.03046754374106 23.26618899553873 49 22.284494515268307 27.768751852949897 27.48413874888823 22.46261488289357 50 21.620038327261685 28.114564359441406 27.029257741347905 23.236139571949 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 61.0 2 22.0 3 40.5 4 59.0 5 69.5 6 80.0 7 71.0 8 62.0 9 92.5 10 123.0 11 247.5 12 372.0 13 688.0 14 1004.0 15 1396.5 16 1789.0 17 2213.5 18 2638.0 19 2715.0 20 2792.0 21 3161.0 22 3530.0 23 3538.5 24 3547.0 25 4625.0 26 5703.0 27 7796.5 28 9890.0 29 11619.0 30 13348.0 31 13846.5 32 14345.0 33 16228.5 34 18112.0 35 20589.5 36 23067.0 37 26357.0 38 29647.0 39 29687.5 40 29728.0 41 29695.5 42 29663.0 43 26863.0 44 24063.0 45 23951.0 46 23839.0 47 23942.5 48 24046.0 49 23677.5 50 23309.0 51 23634.0 52 23959.0 53 22781.0 54 21603.0 55 20556.5 56 19510.0 57 18614.5 58 17719.0 59 15711.0 60 13703.0 61 12532.5 62 11362.0 63 9846.5 64 8331.0 65 7338.5 66 6346.0 67 5487.0 68 4628.0 69 4055.5 70 3483.0 71 2996.5 72 2510.0 73 2082.5 74 1655.0 75 1320.5 76 986.0 77 733.0 78 480.0 79 368.0 80 256.0 81 175.5 82 95.0 83 91.0 84 87.0 85 52.0 86 17.0 87 13.5 88 10.0 89 6.0 90 2.0 91 5.5 92 9.0 93 6.5 94 4.0 95 4.0 96 4.0 97 3.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03154334719975714 2 0.0054548645533414606 3 4.743360481166487E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 2.3716802405832435E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.743360481166487E-4 17 0.0 18 4.743360481166487E-4 19 0.0 20 4.743360481166487E-4 21 0.0 22 0.0 23 0.0 24 0.0011858401202916218 25 2.3716802405832435E-4 26 9.486720962332974E-4 27 0.0011858401202916218 28 0.0021345122165249194 29 7.115040721749731E-4 30 0.0018973441924665948 31 9.486720962332974E-4 32 0.0011858401202916218 33 2.3716802405832435E-4 34 9.486720962332974E-4 35 0.0 36 0.0 37 0.0016601761684082704 38 0.0 39 9.486720962332974E-4 40 0.0 41 9.486720962332974E-4 42 0.0054548645533414606 43 0.0037946883849331895 44 0.0033203523368165407 45 0.0018973441924665948 46 0.0023716802405832436 47 4.743360481166487E-4 48 0.0030831843127582166 49 0.004031856408991514 50 0.0023716802405832436 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 421642.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.77529138102569 #Duplication Level Percentage of deduplicated Percentage of total 1 69.64919964256909 32.578616077363996 2 15.61899774892791 14.611663415713746 3 6.070428859113655 8.518382360784855 4 2.8388006675837842 5.3114291359552706 5 1.5200898876957885 3.5551323711160565 6 0.9623413231752656 2.7008277479714917 7 0.6025395810998386 1.972877513218228 8 0.44734823312093597 1.673987516241503 9 0.32672199241921374 1.3754264756398191 >10 1.739724478392312 15.478063402058378 >50 0.14242300921050652 4.685441379743685 >100 0.08036726948303761 7.200062308117556 >500 0.0010173072086460458 0.33809029607544266 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 900 0.21345122165249195 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 521 0.12356454053438698 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 488 0.11573799574046228 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 459 0.10886012304277089 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 445 0.10553977070595433 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 437 0.10364242651348773 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 424 0.10055924220072952 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.3716802405832437E-4 0.0 10 0.0 0.0 0.0 2.3716802405832437E-4 0.0 11 0.0 0.0 0.0 2.3716802405832437E-4 0.0 12 0.0 0.0 0.0 2.3716802405832437E-4 0.0 13 0.0 0.0 0.0 2.3716802405832437E-4 0.0 14 0.0 0.0 0.0 2.3716802405832437E-4 0.0 15 0.0 0.0 0.0 2.3716802405832437E-4 0.0 16 0.0 0.0 0.0 2.3716802405832437E-4 0.0 17 0.0 0.0 0.0 2.3716802405832437E-4 0.0 18 0.0 0.0 0.0 2.3716802405832437E-4 0.0 19 0.0 0.0 0.0 2.3716802405832437E-4 0.0 20 0.0 0.0 0.0 2.3716802405832437E-4 0.0 21 0.0 0.0 0.0 4.7433604811664875E-4 0.0 22 0.0 0.0 0.0 4.7433604811664875E-4 0.0 23 0.0 0.0 0.0 4.7433604811664875E-4 0.0 24 0.0 0.0 0.0 0.0016601761684082706 0.0 25 0.0 0.0 0.0 0.0023716802405832436 0.0 26 0.0 0.0 0.0 0.0026088482646415678 0.0 27 0.0 0.0 0.0 0.0028460162886998924 0.0 28 0.0 0.0 0.0 0.004980528505224811 0.0 29 0.0 0.0 0.0 0.00758937676986638 0.0 30 0.0 0.0 0.0 0.01138406515479957 0.0 31 0.0 0.0 0.0 0.028697330911057247 0.0 32 0.0 0.0 0.0 0.04008139606585682 0.0 33 0.0 0.0 0.0 0.05099112517253974 0.0 34 0.0 0.0 0.0 0.06877872697691406 0.0 35 0.0 0.0 0.0 0.08704066482940503 0.0 36 0.0 0.0 0.0 0.10980879513900418 0.0 37 0.0 0.0 0.0 0.14277515048311126 0.0 38 0.0 0.0 0.0 0.18546539481360966 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTATT 25 0.0023516514 35.1982 29 GTAATAC 40 1.817913E-5 32.99831 3 AGTGCGT 35 3.2153018E-4 31.426962 8 CTTAAGG 30 0.0057422617 29.331833 2 GGATAGC 80 4.296453E-9 27.501854 35 CTTTAGA 40 7.021718E-4 27.501854 39 TGCGCTA 40 7.026589E-4 27.498592 10 GCTAGTT 65 5.912316E-7 27.078749 39 TAGGGCG 50 8.324965E-5 26.401781 31 TCTAGTA 125 1.8189894E-12 24.638737 2 GTACTAC 45 0.0013942285 24.451893 1 TACGGCG 45 0.0013971225 24.443193 7 ATCGTGA 45 0.0013971225 24.443193 15 CGCTATC 45 0.0013971225 24.443193 12 CTACACT 90 1.5073965E-8 24.443193 4 CGGTCGA 45 0.0013971225 24.443193 10 GCGCTAT 45 0.0013971225 24.443193 11 ACAGTCC 65 1.8104776E-5 23.691095 8 TATATTG 65 1.8104776E-5 23.691095 5 CTACACG 65 1.8104776E-5 23.691095 4 >>END_MODULE