##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062037_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1623871 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.165520537037732 32.0 32.0 32.0 32.0 32.0 2 31.172891812219074 32.0 32.0 32.0 32.0 32.0 3 31.405052494933404 32.0 32.0 32.0 32.0 32.0 4 31.53495012842769 32.0 32.0 32.0 32.0 32.0 5 31.461467690475413 32.0 32.0 32.0 32.0 32.0 6 35.08701430101283 36.0 36.0 36.0 36.0 36.0 7 35.10265532175893 36.0 36.0 36.0 36.0 36.0 8 35.029946344260104 36.0 36.0 36.0 36.0 36.0 9 35.16590665145199 36.0 36.0 36.0 36.0 36.0 10 34.9884676800066 36.0 36.0 36.0 36.0 36.0 11 35.17050430730027 36.0 36.0 36.0 36.0 36.0 12 35.068879855604294 36.0 36.0 36.0 36.0 36.0 13 35.11973056973122 36.0 36.0 36.0 36.0 36.0 14 35.07985794438105 36.0 36.0 36.0 36.0 36.0 15 35.0352780485642 36.0 36.0 36.0 36.0 36.0 16 35.058334682988985 36.0 36.0 36.0 36.0 36.0 17 35.034359872181966 36.0 36.0 36.0 36.0 36.0 18 35.02859094102918 36.0 36.0 36.0 36.0 36.0 19 35.016542570191845 36.0 36.0 36.0 36.0 36.0 20 35.02425069479041 36.0 36.0 36.0 36.0 36.0 21 35.01518224046122 36.0 36.0 36.0 36.0 36.0 22 34.994272328282236 36.0 36.0 36.0 36.0 36.0 23 34.960264085016604 36.0 36.0 36.0 32.0 36.0 24 34.94291110562354 36.0 36.0 36.0 32.0 36.0 25 34.92387326333188 36.0 36.0 36.0 32.0 36.0 26 34.87890910053816 36.0 36.0 36.0 32.0 36.0 27 34.85490596235785 36.0 36.0 36.0 32.0 36.0 28 34.83918488599156 36.0 36.0 36.0 32.0 36.0 29 34.822748235543344 36.0 36.0 36.0 32.0 36.0 30 34.80042133888714 36.0 36.0 36.0 32.0 36.0 31 34.801945474732904 36.0 36.0 36.0 32.0 36.0 32 34.76912205464597 36.0 36.0 36.0 32.0 36.0 33 34.7499031634902 36.0 36.0 36.0 32.0 36.0 34 34.734079862255065 36.0 36.0 36.0 32.0 36.0 35 34.72174021212276 36.0 36.0 36.0 32.0 36.0 36 34.69410193297374 36.0 36.0 36.0 32.0 36.0 37 34.68735139675504 36.0 36.0 36.0 32.0 36.0 38 34.67307871130158 36.0 36.0 36.0 32.0 36.0 39 34.65517889044142 36.0 36.0 36.0 32.0 36.0 40 34.64025282796478 36.0 36.0 36.0 32.0 36.0 41 34.617083499859284 36.0 36.0 36.0 32.0 36.0 42 34.58083739410335 36.0 36.0 36.0 32.0 36.0 43 34.57923936076203 36.0 36.0 36.0 32.0 36.0 44 34.536759385443794 36.0 36.0 36.0 32.0 36.0 45 34.5172436726809 36.0 36.0 36.0 32.0 36.0 46 34.50134401070036 36.0 36.0 36.0 32.0 36.0 47 34.48016252522522 36.0 36.0 36.0 32.0 36.0 48 34.45306185035634 36.0 36.0 36.0 32.0 36.0 49 34.44362267692446 36.0 36.0 36.0 32.0 36.0 50 33.953503079986035 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 12.0 21 23.0 22 78.0 23 236.0 24 707.0 25 1703.0 26 3612.0 27 7425.0 28 13111.0 29 22313.0 30 35111.0 31 53849.0 32 84931.0 33 150493.0 34 335530.0 35 914734.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.37942016219196 17.871053385364533 12.536890509644971 26.212635942798535 2 16.328026224952996 19.56556145872914 36.75619550966039 27.350216806657485 3 18.953141511502167 22.53736141114918 28.127347789352335 30.382149287996313 4 13.095990999285043 15.8976913806577 34.550158233012354 36.456159387044906 5 15.290130804725251 36.00236718310752 32.739423266995956 15.96807874517126 6 35.67039131947545 34.248167181385156 16.10977513524831 13.971666363891085 7 31.451820988243522 29.60949484287853 19.50062535755611 19.438058811321834 8 28.506697884253125 33.162794335264316 18.481455731397382 19.84905204908518 9 26.9533109464976 14.741318737756878 18.26961624414747 40.03575407159805 10 16.77836478390217 26.67496371325062 30.4872739275472 26.059397575300007 11 37.31035285438314 21.240172402857123 21.505772318121327 19.94370242463841 12 24.54974844045398 23.31929280053206 28.185199554151502 23.94575920486246 13 29.67353933902385 19.369334140458204 24.73152116147157 26.225605359046376 14 23.68962805543051 19.07503736442119 24.66267332811535 32.57266125203295 15 25.42757398832789 26.76351754542079 21.726664248576398 26.082244217674926 16 26.065408307730774 25.759532373768444 23.133815024808158 25.04124429369263 17 24.56063320300689 25.822617683301196 24.532367410958138 25.084381702733776 18 25.04516987197251 25.342176405746763 25.21741272392494 24.39524099835578 19 25.929091658142795 24.970025328366603 24.68884535779012 24.412037655700484 20 26.09358055451722 24.422257296335957 24.546528863580242 24.937633285566577 21 26.661662164051208 24.272802457830704 24.205186249400352 24.860349128717736 22 26.116914459338208 24.051048389927526 24.772780596488268 25.059256554245994 23 25.160203710888183 24.248554379353028 24.861596063724313 25.729645846034472 24 24.9770299263726 24.782061419390438 24.806755788089063 25.4341528661479 25 25.348149790315727 24.147253166817542 25.012162303632678 25.492434739234053 26 25.060503760778293 25.01320921800198 25.108414117913668 24.81787290330606 27 25.485477249970135 24.687936073543014 24.692924169851455 25.133662506635403 28 25.353405035579136 24.506156683673627 24.97350424455536 25.16693403619188 29 25.072604602355863 24.784403127355493 24.863966440539357 25.27902582974929 30 25.195461162716796 24.94346775445053 24.825969361739865 25.035101721092808 31 25.49831759309893 24.566650901799658 24.50888744377608 25.426144061325335 32 25.460322934243102 24.640301503824222 24.508024090746737 25.391351471185942 33 25.21558081347695 24.53769361937447 24.726378790407356 25.520346776741228 34 25.550017304468742 24.622411565543292 24.785972665097564 25.041598464890402 35 25.628622523505605 24.487088852049553 25.033007608992847 24.851281015451995 36 24.877237407520077 24.970348538610946 24.73818652524285 25.41422752862613 37 25.712227114573388 24.609107984111834 24.57776272438957 25.10090217692521 38 25.15760180457684 24.61433204977489 24.8213681998139 25.406697945834367 39 25.662170192719223 24.587142404079156 24.451108928389985 25.29957847481164 40 25.75387900987026 24.709705468671096 24.562341274044442 24.974074247414197 41 24.97973958282015 24.91421653151511 24.959109674749484 25.146934210915255 42 25.81289409944716 24.79835841549159 24.615638531171076 24.773108953890173 43 25.5267890134253 24.250646631358542 24.89253602660426 25.3300283286119 44 25.0743165555793 24.673096452327478 24.685536430970128 25.567050561123096 45 25.36892466688549 24.83974724126315 24.569770069852897 25.221558021998458 46 25.205731349313144 24.736227253776693 24.492422595562005 25.565618801348162 47 25.19453791241545 24.733965247978876 24.905779358659185 25.16571748094649 48 25.526140437958723 25.033470747121267 24.22407602878669 25.216312786133322 49 25.24197526454546 24.895385765566814 24.552060169119414 25.31057880076831 50 25.35416050842447 24.99187112030742 24.38651591289782 25.267452458370283 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 6.5 2 6.0 3 30.5 4 55.0 5 67.5 6 80.0 7 85.5 8 91.0 9 110.5 10 130.0 11 226.0 12 322.0 13 621.5 14 921.0 15 1236.5 16 1552.0 17 1629.0 18 1706.0 19 1936.0 20 2166.0 21 2614.0 22 3062.0 23 3968.5 24 4875.0 25 6541.0 26 8207.0 27 10631.5 28 13056.0 29 15368.5 30 17681.0 31 20426.5 32 23172.0 33 27028.5 34 30885.0 35 36038.0 36 41191.0 37 46962.5 38 52734.0 39 59802.5 40 66871.0 41 73494.0 42 80117.0 43 84809.0 44 89501.0 45 97166.5 46 104832.0 47 111299.0 48 117766.0 49 123240.5 50 128715.0 51 127726.5 52 126738.0 53 127384.0 54 128030.0 55 126639.0 56 125248.0 57 119920.0 58 114592.0 59 106197.0 60 97802.0 61 86477.5 62 75153.0 63 64732.0 64 54311.0 65 45494.0 66 36677.0 67 31713.5 68 26750.0 69 22500.0 70 18250.0 71 14434.0 72 10618.0 73 9310.5 74 8003.0 75 6129.0 76 4255.0 77 3688.0 78 3121.0 79 2613.0 80 2105.0 81 1665.0 82 1225.0 83 931.5 84 638.0 85 505.0 86 372.0 87 255.5 88 139.0 89 95.0 90 51.0 91 41.5 92 32.0 93 25.5 94 19.0 95 18.0 96 17.0 97 16.0 98 15.0 99 12.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029928485698679265 2 0.004557012225724827 3 1.847437388807362E-4 4 0.0 5 0.0 6 3.694874777614724E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 6.158124629357874E-5 13 0.0 14 0.0 15 0.0 16 6.158124629357873E-4 17 0.0 18 6.158124629357874E-5 19 0.0 20 4.9264997034863E-4 21 0.0 22 0.0 23 6.158124629357874E-5 24 0.001170043679577996 25 6.158124629357874E-5 26 3.0790623146789367E-4 27 3.0790623146789367E-4 28 0.0016011124036330471 29 4.3106872405505116E-4 30 0.001170043679577996 31 4.3106872405505116E-4 32 6.773937092293661E-4 33 1.231624925871575E-4 34 8.005562018165236E-4 35 1.847437388807362E-4 36 3.0790623146789367E-4 37 0.0012932061721651535 38 0.0 39 3.694874777614724E-4 40 1.847437388807362E-4 41 9.237186944036811E-4 42 0.004557012225724827 43 0.0043722684868440906 44 0.004557012225724827 45 0.0018474373888073621 46 0.0018474373888073621 47 0.001416368664752311 48 0.004002781009082618 49 0.0029558998220917793 50 0.001909018635100941 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1623871.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.14576016574587 #Duplication Level Percentage of deduplicated Percentage of total 1 70.20999689786309 36.611536594737295 2 15.757165953517655 16.43338793407976 3 6.065863278800158 9.48927155203554 4 2.8215097275944157 5.885190782418294 5 1.4805798660547749 3.8602981300762207 6 0.9418667462433497 2.9468614474618278 7 0.5764701194664628 2.1042330814691925 8 0.4156705629172087 1.7340365985473074 9 0.2885828886130222 1.3543536687797528 >10 1.3364838302296644 11.814302548570991 >50 0.06350457924755663 2.237294653711068 >100 0.03838416807038457 3.9973424208052735 >500 0.003208402949126007 1.1129474491800848 >1k 7.129784331391126E-4 0.418943138127418 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.158124629357874E-5 2 0.0 0.0 0.0 0.0 6.158124629357874E-5 3 0.0 0.0 0.0 0.0 6.158124629357874E-5 4 0.0 0.0 0.0 0.0 6.158124629357874E-5 5 0.0 0.0 0.0 0.0 6.158124629357874E-5 6 0.0 0.0 0.0 0.0 1.231624925871575E-4 7 0.0 0.0 0.0 0.0 1.231624925871575E-4 8 0.0 0.0 0.0 0.0 1.231624925871575E-4 9 0.0 0.0 0.0 0.0 1.231624925871575E-4 10 0.0 0.0 0.0 0.0 1.231624925871575E-4 11 0.0 0.0 0.0 0.0 1.231624925871575E-4 12 0.0 0.0 0.0 0.0 7.389749555229448E-4 13 0.0 0.0 0.0 0.0 9.8529994069726E-4 14 0.0 0.0 0.0 0.0 9.8529994069726E-4 15 0.0 0.0 0.0 0.0 0.0012316249258715747 16 0.0 0.0 0.0 0.0 0.0013547874184587322 17 0.0 0.0 0.0 0.0 0.0013547874184587322 18 0.0 0.0 0.0 6.158124629357874E-5 0.001416368664752311 19 0.0 0.0 0.0 6.158124629357874E-5 0.001416368664752311 20 0.0 0.0 0.0 2.46324985174315E-4 0.0016011124036330471 21 0.0 0.0 0.0 3.0790623146789367E-4 0.001662693649926626 22 0.0 0.0 0.0 3.0790623146789367E-4 0.001662693649926626 23 0.0 0.0 0.0 4.3106872405505116E-4 0.0017858561425137835 24 0.0 0.0 0.0 6.158124629357873E-4 0.0017858561425137835 25 0.0 0.0 0.0 0.0010468811869908386 0.0017858561425137835 26 0.0 0.0 0.0 0.0014779499110458897 0.001909018635100941 27 0.0 0.0 0.0 0.0017242748962202046 0.001909018635100941 28 0.0 0.0 0.0 0.0022785061128624134 0.001909018635100941 29 0.0 0.0 0.0 0.0030174810683853584 0.00197059988139452 30 0.0 0.0 0.0 0.004249105994256933 0.00197059988139452 31 0.0 0.0 0.0 0.00732816830893587 0.00197059988139452 32 0.0 0.0 0.0 0.009976161899559756 0.00197059988139452 33 0.0 0.0 0.0 0.014040524154935952 0.00197059988139452 34 0.0 0.0 0.0 0.017858561425137833 0.00197059988139452 35 0.0 0.0 0.0 0.021861342434220454 0.00197059988139452 36 0.0 0.0 0.0 0.027095748369174645 0.00197059988139452 37 0.0 0.0 0.0 0.03651767905209219 0.00197059988139452 38 0.0 0.0 0.0 0.047910209616404256 0.00197059988139452 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 740 0.0 26.763218 1 GTATCAA 1700 0.0 26.018045 1 AATCCCG 110 5.2586984E-9 21.999214 19 ACCGTCG 395 0.0 21.163801 8 CGCAATA 200 0.0 19.799902 36 TACCGTC 420 0.0 19.38026 7 CGTCGTA 405 0.0 19.011667 10 ATACCGT 410 0.0 18.779818 6 CCGTCGT 420 0.0 18.33268 9 TCTAGCG 235 0.0 17.788242 28 TCAACGC 2415 0.0 17.490059 4 GTCGTAG 485 0.0 17.2365 11 ATCAACG 2475 0.0 17.154943 3 AACGAAT 130 7.3209776E-7 16.922995 31 TATCAAC 2590 0.0 16.648567 2 TATGCGA 80 0.0019892212 16.49941 12 CAACGCA 2550 0.0 16.477844 5 GTATAGA 235 3.6379788E-12 15.9187355 1 CCTAATA 250 0.0 15.839924 2 AACGCAG 2670 0.0 15.7372675 6 >>END_MODULE