##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062031_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1948444 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.295552759022073 32.0 32.0 32.0 32.0 32.0 2 31.441849496316035 32.0 32.0 32.0 32.0 32.0 3 31.567297289529492 32.0 32.0 32.0 32.0 32.0 4 31.642997694570642 32.0 32.0 32.0 32.0 32.0 5 31.615085165393513 32.0 32.0 32.0 32.0 32.0 6 35.25484386515599 36.0 36.0 36.0 36.0 36.0 7 35.25761171478369 36.0 36.0 36.0 36.0 36.0 8 35.19855946591229 36.0 36.0 36.0 36.0 36.0 9 35.28600206113186 36.0 36.0 36.0 36.0 36.0 10 35.169436740291225 36.0 36.0 36.0 36.0 36.0 11 35.29497332230231 36.0 36.0 36.0 36.0 36.0 12 35.208129666544174 36.0 36.0 36.0 36.0 36.0 13 35.2492291284738 36.0 36.0 36.0 36.0 36.0 14 35.20944199576688 36.0 36.0 36.0 36.0 36.0 15 35.181063966939774 36.0 36.0 36.0 36.0 36.0 16 35.195245026287644 36.0 36.0 36.0 36.0 36.0 17 35.17808825914422 36.0 36.0 36.0 36.0 36.0 18 35.174831814514555 36.0 36.0 36.0 36.0 36.0 19 35.16807514098429 36.0 36.0 36.0 36.0 36.0 20 35.16242961049946 36.0 36.0 36.0 36.0 36.0 21 35.160852967804054 36.0 36.0 36.0 36.0 36.0 22 35.13833243346999 36.0 36.0 36.0 36.0 36.0 23 35.11093108141676 36.0 36.0 36.0 36.0 36.0 24 35.09946603546214 36.0 36.0 36.0 36.0 36.0 25 35.07700298289301 36.0 36.0 36.0 36.0 36.0 26 35.036171427046405 36.0 36.0 36.0 36.0 36.0 27 35.01879859005442 36.0 36.0 36.0 36.0 36.0 28 35.002567689910514 36.0 36.0 36.0 36.0 36.0 29 34.98550433063511 36.0 36.0 36.0 36.0 36.0 30 34.96779430150418 36.0 36.0 36.0 36.0 36.0 31 34.96545551219332 36.0 36.0 36.0 36.0 36.0 32 34.9444387418884 36.0 36.0 36.0 36.0 36.0 33 34.926367398806434 36.0 36.0 36.0 32.0 36.0 34 34.911982587131064 36.0 36.0 36.0 32.0 36.0 35 34.897986803829106 36.0 36.0 36.0 32.0 36.0 36 34.87807963687948 36.0 36.0 36.0 32.0 36.0 37 34.874585566739405 36.0 36.0 36.0 32.0 36.0 38 34.85634177836263 36.0 36.0 36.0 32.0 36.0 39 34.84102802030748 36.0 36.0 36.0 32.0 36.0 40 34.83569761306971 36.0 36.0 36.0 32.0 36.0 41 34.80831473729807 36.0 36.0 36.0 32.0 36.0 42 34.768515800300136 36.0 36.0 36.0 32.0 36.0 43 34.77136166089454 36.0 36.0 36.0 32.0 36.0 44 34.72485378076044 36.0 36.0 36.0 32.0 36.0 45 34.71698545095471 36.0 36.0 36.0 32.0 36.0 46 34.70528431917982 36.0 36.0 36.0 32.0 36.0 47 34.67953505463847 36.0 36.0 36.0 32.0 36.0 48 34.65403214051828 36.0 36.0 36.0 32.0 36.0 49 34.646542574485075 36.0 36.0 36.0 32.0 36.0 50 34.214527079043584 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 23.0 21 55.0 22 116.0 23 362.0 24 902.0 25 2172.0 26 4606.0 27 8656.0 28 15134.0 29 24054.0 30 36353.0 31 54351.0 32 82169.0 33 139382.0 34 322207.0 35 1257895.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.28117292633991 17.525305316940237 11.945300675835245 26.248221080884605 2 16.57931177484405 19.438978348099493 36.75018245983574 27.23152741722072 3 18.854407190158696 22.724424296142402 27.929098186704138 30.492070326994764 4 12.9090766319569 15.60466485291076 34.49590262584022 36.99035588929212 5 15.28322086752301 36.190211266015346 32.54094036061596 15.98562750584569 6 35.96649834406072 34.00626449556338 16.139877984501457 13.887359175874456 7 31.878976249766485 29.552042552929414 19.43119740675123 19.137783790552874 8 28.782556747845973 32.69721890903716 18.51580030013693 20.004424042979938 9 27.32015906025526 14.350989815463006 18.133597886313385 40.195253237968345 10 17.003140974317915 25.97159779105336 30.154995791505 26.87026544312373 11 37.89690645458633 20.94635514287298 21.39589333847932 19.760845064061375 12 25.113013255705578 23.045363377135807 27.822457304392636 24.019166062765983 13 29.71247826470763 18.944963262993443 24.74990299952167 26.592655472777256 14 24.08065102204631 19.016302239120037 24.329362301405634 32.57368443742802 15 25.672844587783892 26.49852908269368 21.47354504414805 26.355081285374382 16 26.606779194757628 25.391186348817925 22.699894068666495 25.302140387757948 17 24.740151628684224 25.654932859245633 24.36610957256149 25.23880593950865 18 25.561666994279015 24.72643513455116 25.048538806153225 24.663359065016596 19 26.22324594560888 24.622480616574364 24.51424034472653 24.640033093090228 20 26.250141780163506 24.04139929451217 24.180279700827175 25.52817922449715 21 27.177327138988854 23.84384667970955 23.963583248992528 25.01524293230906 22 26.61056720131551 23.634294852713243 24.35014811819072 25.40498982778053 23 25.035682337127646 24.036474251492088 24.967268737140373 25.960574674239894 24 25.3659620637376 24.503368359896655 24.615972071815918 25.514697504549826 25 25.509792449344094 23.880181067931268 24.68954650900207 25.920479973722564 26 25.249957016785267 24.81940634406588 24.939656698837787 24.99097994031107 27 25.81666992569919 24.297550182685455 24.28199920859399 25.603780683021366 28 25.41030976090199 24.138911499964586 24.908412312423593 25.542366426709833 29 25.26435291466955 24.47957003485358 24.920487549764246 25.335589500712626 30 25.297305453606693 24.425931409959983 25.050797647526174 25.22596548890715 31 25.840353062480336 24.24184102436979 24.102652536366328 25.815153376783545 32 25.623875694471177 24.204421519945598 24.196004465144924 25.9756983204383 33 25.259194668142037 24.051099367237054 24.611394044155347 26.078311920465563 34 25.915547172716423 24.13328714217894 24.80721608478643 25.143949600318205 35 26.41941904233032 23.897450162643104 24.736019313932495 24.947111481094087 36 25.183454644181648 24.5004459982817 24.48309876937321 25.83300058816344 37 26.233149678839872 24.247371568026153 24.27395741645089 25.24552133668308 38 25.47511012639323 24.058337862590797 24.81961237767797 25.646939633338008 39 25.948664151129325 24.02685452447722 24.23989850258465 25.784582821808804 40 26.146428787718595 24.184604930503447 24.645742598445324 25.02322368333263 41 25.13164512784718 24.70601820962626 24.927120436045616 25.235216226480944 42 26.34753036171268 24.580694765087443 24.3665126553757 24.70526221782418 43 25.904365477543877 23.84236958870432 24.514013103361552 25.739251830390252 44 25.380474615522008 24.50522389132171 24.466781224786434 25.647520268369846 45 25.637858012436897 24.55614772356338 24.306968398621226 25.499025865378496 46 25.444867529020126 24.511327050193778 24.407856952590063 25.635948468196034 47 25.621659462516693 24.313980499010988 24.840819250939482 25.223540787532833 48 26.282803719418652 24.79540579838829 23.827365350198036 25.094425131995017 49 25.519601266495208 24.909706528896734 24.080038226845122 25.49065397776294 50 25.773723403217918 24.852507412480886 23.965421937863983 25.408347246437213 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 157.0 1 107.5 2 58.0 3 144.5 4 231.0 5 240.0 6 249.0 7 199.0 8 149.0 9 210.0 10 271.0 11 471.5 12 672.0 13 1280.0 14 1888.0 15 2365.5 16 2843.0 17 2929.0 18 3015.0 19 2985.5 20 2956.0 21 3459.0 22 3962.0 23 4888.0 24 5814.0 25 7562.0 26 9310.0 27 11708.0 28 14106.0 29 16578.0 30 19050.0 31 21625.0 32 24200.0 33 28151.0 34 32102.0 35 37373.0 36 42644.0 37 51345.0 38 60046.0 39 67276.0 40 74506.0 41 82456.0 42 90406.0 43 95541.5 44 100677.0 45 111451.0 46 122225.0 47 131551.0 48 140877.0 49 147665.5 50 154454.0 51 151386.0 52 148318.0 53 149331.0 54 150344.0 55 152694.5 56 155045.0 57 151246.5 58 147448.0 59 135761.5 60 124075.0 61 109410.0 62 94745.0 63 82287.0 64 69829.0 65 59201.0 66 48573.0 67 41294.0 68 34015.0 69 30283.0 70 26551.0 71 20839.5 72 15128.0 73 13329.0 74 11530.0 75 8501.5 76 5473.0 77 4772.5 78 4072.0 79 3415.0 80 2758.0 81 2203.5 82 1649.0 83 1355.5 84 1062.0 85 820.0 86 578.0 87 396.5 88 215.0 89 135.5 90 56.0 91 45.5 92 35.0 93 33.5 94 32.0 95 23.5 96 15.0 97 18.0 98 21.0 99 15.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0324361387856156 2 0.0035926103085333733 3 1.5396901322285887E-4 4 5.132300440761962E-5 5 0.0 6 1.5396901322285887E-4 7 0.0 8 0.0 9 0.0 10 2.0529201763047847E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.158760528914355E-4 17 0.0 18 1.5396901322285887E-4 19 5.132300440761962E-5 20 2.566150220380981E-4 21 0.0 22 0.0 23 5.132300440761962E-5 24 9.238140793371532E-4 25 2.0529201763047847E-4 26 4.619070396685766E-4 27 6.671990572990551E-4 28 0.0019502741674895453 29 3.592610308533373E-4 30 0.0013857211190057297 31 3.592610308533373E-4 32 9.751370837447727E-4 33 2.566150220380981E-4 34 9.751370837447727E-4 35 3.0793802644571775E-4 36 3.0793802644571775E-4 37 0.0020015971718971653 38 5.132300440761962E-5 39 0.0010264600881523924 40 1.0264600881523923E-4 41 0.001231752105782871 42 0.005234946449577201 43 0.004567747392278146 44 0.004516424387870526 45 0.002463504211565742 46 0.002822765242419079 47 0.0015396901322285886 48 0.003849225330571471 49 0.003849225330571471 50 0.0021042431807124042 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1948444.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.419547637665794 #Duplication Level Percentage of deduplicated Percentage of total 1 74.67787512345441 38.39902557390122 2 14.667544093645482 15.083969645015353 3 4.680089315637052 7.219442265417905 4 1.9515582474502153 4.013929690897838 5 1.011210703815057 2.5997998478267945 6 0.6475739636540588 1.9978776163813161 7 0.42670814221742215 1.5358797752290032 8 0.3032693953094174 1.247518009532695 9 0.23106714511684534 1.0693231268251562 >10 1.2321590651791434 11.384178500234148 >50 0.09140248338585438 3.270699508642839 >100 0.0679082734386991 7.000526387111222 >500 0.008825829286912848 3.095053419319391 >1k 0.00280821840947227 2.0827766336652265 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2313 0.11871010919482419 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2124 0.10901006136178407 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1960 0.10059308863893444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5396901322285885E-4 2 0.0 0.0 0.0 0.0 2.0529201763047847E-4 3 0.0 0.0 0.0 5.132300440761962E-5 2.0529201763047847E-4 4 0.0 0.0 0.0 5.132300440761962E-5 2.0529201763047847E-4 5 5.132300440761962E-5 0.0 0.0 5.132300440761962E-5 2.566150220380981E-4 6 5.132300440761962E-5 0.0 0.0 5.132300440761962E-5 3.079380264457177E-4 7 5.132300440761962E-5 0.0 0.0 1.0264600881523923E-4 3.079380264457177E-4 8 5.132300440761962E-5 0.0 0.0 1.0264600881523923E-4 3.079380264457177E-4 9 5.132300440761962E-5 0.0 0.0 1.0264600881523923E-4 3.079380264457177E-4 10 5.132300440761962E-5 0.0 0.0 1.0264600881523923E-4 4.1058403526095694E-4 11 5.132300440761962E-5 0.0 0.0 1.0264600881523923E-4 4.1058403526095694E-4 12 1.5396901322285885E-4 0.0 0.0 1.0264600881523923E-4 0.0011291060969676316 13 1.5396901322285885E-4 0.0 0.0 1.0264600881523923E-4 0.0013343981145981102 14 2.0529201763047847E-4 0.0 0.0 1.0264600881523923E-4 0.0013343981145981102 15 2.0529201763047847E-4 0.0 0.0 1.0264600881523923E-4 0.001744982149859067 16 2.0529201763047847E-4 0.0 0.0 1.0264600881523923E-4 0.0019502741674895456 17 2.566150220380981E-4 0.0 0.0 2.0529201763047847E-4 0.0019502741674895456 18 2.566150220380981E-4 0.0 0.0 2.566150220380981E-4 0.0020015971718971653 19 2.566150220380981E-4 0.0 0.0 2.566150220380981E-4 0.0020529201763047848 20 2.566150220380981E-4 0.0 0.0 3.079380264457177E-4 0.002412181207158122 21 2.566150220380981E-4 0.0 0.0 3.079380264457177E-4 0.002566150220380981 22 2.566150220380981E-4 0.0 0.0 4.1058403526095694E-4 0.0026174732247886004 23 2.566150220380981E-4 0.0 0.0 6.671990572990551E-4 0.0026687962291962204 24 3.079380264457177E-4 0.0 0.0 7.698450661142943E-4 0.0026687962291962204 25 3.079380264457177E-4 0.0 0.0 9.238140793371532E-4 0.0026687962291962204 26 3.079380264457177E-4 0.0 0.0 0.0011804291013752513 0.0028740882468266987 27 3.079380264457177E-4 0.0 0.0 0.0013857211190057297 0.0029254112512343182 28 3.5926103085333734E-4 0.0 0.0 0.001744982149859067 0.0029254112512343182 29 4.1058403526095694E-4 0.0 0.0 0.002412181207158122 0.0029254112512343182 30 4.1058403526095694E-4 0.0 0.0 0.0035926103085333733 0.0029254112512343182 31 4.1058403526095694E-4 0.0 0.0 0.006466698555360072 0.0029254112512343182 32 4.1058403526095694E-4 0.0 0.0 0.00949475581540963 0.003079380264457177 33 4.619070396685766E-4 0.0 0.0 0.013087366123943003 0.003079380264457177 34 4.619070396685766E-4 0.0 0.0 0.016936591454514476 0.0031307032688647966 35 5.132300440761962E-4 0.0 0.0 0.02150433884679262 0.0031307032688647966 36 5.645530484838158E-4 0.0 0.0 0.026431347269924105 0.0031307032688647966 37 5.645530484838158E-4 0.0 0.0 0.03474567398395848 0.0031307032688647966 38 6.671990572990551E-4 0.0 0.0 0.04511292087429764 0.0031307032688647966 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2260 0.0 26.388935 1 GGTATCA 1055 0.0 26.28325 1 CGCAATA 440 0.0 21.00076 36 TCTAGCG 475 0.0 20.378117 28 GCGCAAT 500 0.0 18.920198 35 TACCGTC 530 0.0 18.678484 7 TAGCGGC 510 0.0 18.54874 30 ATACGAA 525 0.0 18.440182 40 CCCGTAA 60 0.0074000806 18.339174 1 ATACCGT 565 0.0 18.300138 6 TACGAAT 535 0.0 18.095507 41 CGTCGTA 535 0.0 18.09272 10 CTAGCGG 530 0.0 17.848787 29 CAATACG 535 0.0 17.684244 38 TATGCGA 75 0.0012916086 17.599281 17 ACCGTCG 545 0.0 17.35709 8 CGAATGC 565 0.0 17.134243 43 TCAACGC 3485 0.0 17.106905 4 ATCAACG 3505 0.0 17.072056 3 AATACGA 555 0.0 17.046974 39 >>END_MODULE