##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062030_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 169947 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.092069880609838 32.0 32.0 32.0 32.0 32.0 2 31.455041865993515 32.0 32.0 32.0 32.0 32.0 3 31.58329949925565 32.0 32.0 32.0 32.0 32.0 4 31.688026267012656 32.0 32.0 32.0 32.0 32.0 5 31.684554596433006 32.0 32.0 32.0 32.0 32.0 6 35.31559250825257 36.0 36.0 36.0 36.0 36.0 7 35.29565099707556 36.0 36.0 36.0 36.0 36.0 8 35.28558315239457 36.0 36.0 36.0 36.0 36.0 9 35.29579221757371 36.0 36.0 36.0 36.0 36.0 10 35.217656092781866 36.0 36.0 36.0 36.0 36.0 11 35.336863845787214 36.0 36.0 36.0 36.0 36.0 12 35.264347119984464 36.0 36.0 36.0 36.0 36.0 13 35.2816995886953 36.0 36.0 36.0 36.0 36.0 14 35.25936909742449 36.0 36.0 36.0 36.0 36.0 15 35.261705119831475 36.0 36.0 36.0 36.0 36.0 16 35.27299099130906 36.0 36.0 36.0 36.0 36.0 17 35.26481785497832 36.0 36.0 36.0 36.0 36.0 18 35.263170282499836 36.0 36.0 36.0 36.0 36.0 19 35.19196573049245 36.0 36.0 36.0 36.0 36.0 20 35.1462808993392 36.0 36.0 36.0 36.0 36.0 21 35.10454435794689 36.0 36.0 36.0 36.0 36.0 22 35.10074905705896 36.0 36.0 36.0 36.0 36.0 23 35.11751899121491 36.0 36.0 36.0 36.0 36.0 24 35.119825592684776 36.0 36.0 36.0 36.0 36.0 25 35.09927801020318 36.0 36.0 36.0 36.0 36.0 26 35.08536190694746 36.0 36.0 36.0 36.0 36.0 27 35.051068862645415 36.0 36.0 36.0 36.0 36.0 28 35.00413069957104 36.0 36.0 36.0 36.0 36.0 29 34.969149205340486 36.0 36.0 36.0 36.0 36.0 30 34.90905399918798 36.0 36.0 36.0 36.0 36.0 31 34.91101931778731 36.0 36.0 36.0 36.0 36.0 32 34.856531742249054 36.0 36.0 36.0 36.0 36.0 33 34.85935615221216 36.0 36.0 36.0 36.0 36.0 34 34.782055582034396 36.0 36.0 36.0 32.0 36.0 35 34.76186693498561 36.0 36.0 36.0 32.0 36.0 36 34.727856331679874 36.0 36.0 36.0 32.0 36.0 37 34.634903822956566 36.0 36.0 36.0 32.0 36.0 38 34.594803085667884 36.0 36.0 36.0 32.0 36.0 39 34.43491206081896 36.0 36.0 36.0 32.0 36.0 40 34.484292161673935 36.0 36.0 36.0 32.0 36.0 41 34.42284947660153 36.0 36.0 36.0 32.0 36.0 42 34.40955709721266 36.0 36.0 36.0 32.0 36.0 43 34.40772123073664 36.0 36.0 36.0 32.0 36.0 44 34.269542857479095 36.0 36.0 36.0 32.0 36.0 45 34.2239462891372 36.0 36.0 36.0 32.0 36.0 46 33.992474124285806 36.0 36.0 36.0 32.0 36.0 47 33.95746909330556 36.0 36.0 36.0 32.0 36.0 48 33.879903734693755 36.0 36.0 36.0 32.0 36.0 49 33.776718624041614 36.0 36.0 36.0 32.0 36.0 50 33.468857938063046 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 2.0 21 5.0 22 16.0 23 41.0 24 113.0 25 243.0 26 505.0 27 1008.0 28 1844.0 29 2856.0 30 4040.0 31 5673.0 32 8373.0 33 13197.0 34 26474.0 35 105555.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.22355697074213 22.742388303914588 13.553615886711828 24.480438838631454 2 12.157605785469245 22.68407642562506 44.61319383558017 20.54512395332553 3 17.087680276792177 28.92136960346461 31.280928760142867 22.710021359600347 4 9.767162703666438 19.027108451458396 42.110187293685684 29.09554155118949 5 10.006649131788144 41.434682577509456 36.44842215514249 12.11024613555991 6 26.450754945688633 42.04923917008932 19.636825815258966 11.863180068963082 7 24.962488305177498 34.150058547664855 23.597356823009527 17.290096324148116 8 22.814759895732198 39.58469405167494 21.03891213142921 16.561633921163658 9 25.936909742449117 15.588977740118978 22.902434288336952 35.57167822909496 10 15.148252102125955 28.42768627866335 34.91853342512666 21.50552819408404 11 30.621899768751433 24.094570660264672 28.714834624912474 16.56869494607142 12 24.026314086156273 27.027838090698864 32.466592525905135 16.479255297239728 13 27.68098289466716 23.86567576950461 28.793094317640204 19.660247018188024 14 19.29072004801497 25.56208700359524 29.658069868841462 25.48912307954833 15 20.89710321453159 35.23922163968767 24.881286518738193 18.98238862704255 16 18.824325517079053 29.47188796375298 32.176880755538555 19.526905763629408 17 17.27009008690945 31.38213678382084 30.992603576409117 20.3551695528606 18 17.424255797395656 28.158190494683637 36.43076959287308 17.986784115047634 19 22.27635674651509 26.700088851230092 31.069686431652222 19.953867970602598 20 22.102184798790212 29.03669967695811 31.653986242769804 17.207129281481873 21 20.72469652303365 26.541215790805367 30.555408450869976 22.178679235291003 22 21.37784132700195 30.443020471088044 30.402419577868393 17.776718624041614 23 18.783503092140492 31.128528305883602 32.24358182256821 17.8443867794077 24 21.494012768836974 28.462737944629147 32.53699726382065 17.50625202271323 25 19.627295568618454 29.292073411122292 33.63813424185187 17.442496778407385 26 16.997063790475856 30.321806210171403 34.60196414176184 18.079165857590894 27 17.634909707143994 31.33270960946648 32.04116577521227 18.991214908177255 28 17.299714613551444 30.179764041307482 32.016240548412725 20.504280796728352 29 18.998976145363823 29.099243289044757 30.599719911030565 21.30206065456086 30 18.30875689925035 28.637331858355008 32.41441399032634 20.639497252068303 31 20.97359765103238 27.616845251754956 32.046461543893095 19.363095553319564 32 18.115165993903943 30.71916961858473 32.09195862215057 19.073705765360764 33 17.718465168552548 31.492171088633512 33.177990785362496 17.61137295745144 34 18.671923269293007 29.86142575539145 34.009238282973904 17.457412692341638 35 18.30816847704565 31.510009061701954 32.13491344309369 18.04690901815871 36 17.124263001188613 30.199004389629646 33.301754675014415 19.374977934167323 37 19.194082721853796 29.553438505851965 30.005354736588153 21.24712403570609 38 18.95002559621529 32.09471188076283 30.732522492306423 18.22274003071546 39 20.1300420724352 29.962634970137398 30.46338521286299 19.44393774456442 40 21.377252908259635 29.359153147746063 32.05822991873937 17.205364025254934 41 20.75070904875666 28.636155013945608 32.53974791992751 18.073388017370224 42 19.22477153297987 32.03540135461965 31.391044916645583 17.348782195754897 43 17.206072731552315 32.24079086736496 32.363775450158876 18.189360950923856 44 17.21696864132002 31.52344692444847 31.59053060840194 19.66905382582957 45 17.844323357380752 31.999152652081296 31.181226536112323 18.975297454425625 46 19.33318033905885 29.291930728900027 30.587674545871803 20.787214386169317 47 21.240276323067327 30.214303366951857 29.53173360949949 19.01368670048133 48 18.214449635758083 31.880877005095858 28.81453672429417 21.09013663485189 49 19.925973437527585 29.924266942844195 30.043133124238697 20.10662649538952 50 17.75055312338182 32.95732711952172 28.893047121404695 20.399072635691756 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 603.0 1 336.5 2 70.0 3 169.0 4 268.0 5 239.5 6 211.0 7 152.5 8 94.0 9 144.0 10 194.0 11 309.0 12 424.0 13 737.0 14 1050.0 15 1399.5 16 1749.0 17 1791.5 18 1834.0 19 1766.0 20 1698.0 21 1790.5 22 1883.0 23 1873.5 24 1864.0 25 2322.0 26 2780.0 27 3996.5 28 5213.0 29 6445.0 30 7677.0 31 8768.0 32 9859.0 33 11923.5 34 13988.0 35 16011.5 36 18035.0 37 18341.0 38 18647.0 39 17410.0 40 16173.0 41 14894.0 42 13615.0 43 11467.0 44 9319.0 45 8623.5 46 7928.0 47 7279.5 48 6631.0 49 5911.0 50 5191.0 51 5139.0 52 5087.0 53 4506.5 54 3926.0 55 3716.0 56 3506.0 57 3271.5 58 3037.0 59 2556.5 60 2076.0 61 1805.0 62 1534.0 63 1341.5 64 1149.0 65 983.0 66 817.0 67 693.0 68 569.0 69 528.0 70 487.0 71 398.5 72 310.0 73 255.5 74 201.0 75 155.5 76 110.0 77 90.5 78 71.0 79 53.0 80 35.0 81 28.0 82 21.0 83 13.5 84 6.0 85 4.0 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025890424661806327 2 0.0023536749692551207 3 0.0 4 0.0 5 0.0 6 5.884187423137802E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0011768374846275603 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0011768374846275603 25 0.0 26 0.0 27 0.0 28 0.0011768374846275603 29 5.884187423137802E-4 30 5.884187423137802E-4 31 0.0 32 5.884187423137802E-4 33 0.0 34 0.0011768374846275603 35 5.884187423137802E-4 36 5.884187423137802E-4 37 0.0023536749692551207 38 0.0 39 0.0011768374846275603 40 0.0 41 5.884187423137802E-4 42 0.005884187423137802 43 0.004118931196196461 44 0.005884187423137802 45 0.002942093711568901 46 0.003530512453882681 47 5.884187423137802E-4 48 0.002942093711568901 49 0.004707349938510241 50 0.0017652562269413405 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 169947.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.80137336934456 #Duplication Level Percentage of deduplicated Percentage of total 1 73.79272991370927 35.27393834548418 2 13.779435478907395 13.173518802920912 3 4.614892228910472 6.617945594803086 4 2.124647635929441 4.0624429969343385 5 1.2125016925785048 2.8979623058953674 6 0.7952041557418417 2.280711045208212 7 0.5305464258896808 1.7752593455606747 8 0.396371111685562 1.5157666802002978 9 0.3335918362322587 1.4351533125033098 >10 2.189888843753462 19.662600693157277 >50 0.15879463791129658 5.192206982176796 >100 0.07016507256545662 5.684125050751117 >500 0.0012309661853588882 0.42836884440443196 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 728 0.42836884440443196 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 388 0.2283064720177467 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 366 0.21536125968684353 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 363 0.2135960034599022 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 339 0.19947395364437148 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 335 0.1971202786751164 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 331 0.19476660370586124 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 320 0.18829399754040965 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 312 0.1835866476018994 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 269 0.15828464168240686 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 209 0.12297951714358006 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 199 0.11709532972044225 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 193 0.11356481726655958 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 186 0.10944588607036312 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 181 0.1065037923587942 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 177 0.1041501173895391 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0011768374846275603 0.0 22 0.0 0.0 0.0 0.0011768374846275603 0.0 23 0.0 0.0 0.0 0.002942093711568901 0.0 24 0.0 0.0 0.0 0.004707349938510241 0.0 25 0.0 0.0 0.0 0.005884187423137802 0.0 26 0.0 0.0 0.0 0.006472606165451582 0.0 27 0.0 0.0 0.0 0.006472606165451582 0.0 28 0.0 0.0 0.0 0.008237862392392922 0.0 29 0.0 0.0 0.0 0.010591537361648043 0.0 30 0.0 0.0 0.0 0.021183074723296086 0.0 31 0.0 0.0 0.0 0.04236614944659217 0.0 32 0.0 0.0 0.0 0.06590289913914338 0.0 33 0.0 0.0 0.0 0.08237862392392922 0.0 34 0.0 0.0 0.0 0.10356169864722531 0.0 35 0.0 0.0 0.0 0.13298263576291433 0.0 36 0.0 0.0 0.0 0.1694645977863687 0.0 37 0.0 0.0 0.0 0.2165380971714711 0.0 38 0.0 0.0 0.0 0.2771452276297905 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCAAGAC 20 7.841144E-4 43.99588 3 GACTTGG 40 4.0999657E-7 38.496395 7 TCCGGCA 25 0.0023482025 35.196705 29 CCTAGAG 25 0.0023482025 35.196705 3 CCGGCAC 25 0.0023482025 35.196705 30 ACATATA 25 0.0023482025 35.196705 2 AAGTGTA 25 0.0023482025 35.196705 7 ATACATG 25 0.0023482025 35.196705 1 ACTTGGA 45 1.0310177E-6 34.21902 8 TAGGACC 120 0.0 31.163748 4 CGTCTCC 30 0.0057256827 29.339222 37 CCGTCTC 30 0.0057256827 29.339222 36 CTTGGAA 60 2.9226612E-7 29.330585 9 TCGTACT 40 6.9988926E-4 27.50552 32 CAAGACC 40 7.010952E-4 27.497425 4 CTGGATG 40 7.010952E-4 27.497425 3 TGTAGGA 570 0.0 26.629086 2 GATTCCT 50 8.2887425E-5 26.405298 39 CCACGTC 50 8.305368E-5 26.397528 9 CTGTAGG 560 0.0 26.318964 1 >>END_MODULE