##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062029_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1567957 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16468882756351 32.0 32.0 32.0 32.0 32.0 2 31.201931558072065 32.0 32.0 32.0 32.0 32.0 3 31.42956407605566 32.0 32.0 32.0 32.0 32.0 4 31.546173779000316 32.0 32.0 32.0 32.0 32.0 5 31.491845758525265 32.0 32.0 32.0 32.0 32.0 6 35.12151544972215 36.0 36.0 36.0 36.0 36.0 7 35.135191207411935 36.0 36.0 36.0 36.0 36.0 8 35.06281868699205 36.0 36.0 36.0 36.0 36.0 9 35.1916487505716 36.0 36.0 36.0 36.0 36.0 10 35.024531922750434 36.0 36.0 36.0 36.0 36.0 11 35.204533670247336 36.0 36.0 36.0 36.0 36.0 12 35.11314277113467 36.0 36.0 36.0 36.0 36.0 13 35.15565158993518 36.0 36.0 36.0 36.0 36.0 14 35.109681579278 36.0 36.0 36.0 36.0 36.0 15 35.068695123654535 36.0 36.0 36.0 36.0 36.0 16 35.09261733580704 36.0 36.0 36.0 36.0 36.0 17 35.07657735511879 36.0 36.0 36.0 36.0 36.0 18 35.071607831082105 36.0 36.0 36.0 36.0 36.0 19 35.05526490841267 36.0 36.0 36.0 36.0 36.0 20 35.065117219413544 36.0 36.0 36.0 36.0 36.0 21 35.05065827698081 36.0 36.0 36.0 36.0 36.0 22 35.022827156612074 36.0 36.0 36.0 36.0 36.0 23 34.9909366136954 36.0 36.0 36.0 36.0 36.0 24 34.97900197518172 36.0 36.0 36.0 36.0 36.0 25 34.95056752194097 36.0 36.0 36.0 32.0 36.0 26 34.90359365722402 36.0 36.0 36.0 32.0 36.0 27 34.88211156300842 36.0 36.0 36.0 32.0 36.0 28 34.85875951955315 36.0 36.0 36.0 32.0 36.0 29 34.83470783956448 36.0 36.0 36.0 32.0 36.0 30 34.795697841203555 36.0 36.0 36.0 32.0 36.0 31 34.793273667581445 36.0 36.0 36.0 32.0 36.0 32 34.767867996380005 36.0 36.0 36.0 32.0 36.0 33 34.76926982053717 36.0 36.0 36.0 32.0 36.0 34 34.74141829144549 36.0 36.0 36.0 32.0 36.0 35 34.734081355547374 36.0 36.0 36.0 32.0 36.0 36 34.69286785288117 36.0 36.0 36.0 32.0 36.0 37 34.67228119138471 36.0 36.0 36.0 32.0 36.0 38 34.65757287986852 36.0 36.0 36.0 32.0 36.0 39 34.606614211996884 36.0 36.0 36.0 32.0 36.0 40 34.615267510524845 36.0 36.0 36.0 32.0 36.0 41 34.58181506253042 36.0 36.0 36.0 32.0 36.0 42 34.57037852441106 36.0 36.0 36.0 32.0 36.0 43 34.55811160637696 36.0 36.0 36.0 32.0 36.0 44 34.51097510964905 36.0 36.0 36.0 32.0 36.0 45 34.48917795577302 36.0 36.0 36.0 32.0 36.0 46 34.450982393012055 36.0 36.0 36.0 32.0 36.0 47 34.42878408017567 36.0 36.0 36.0 32.0 36.0 48 34.407476097877684 36.0 36.0 36.0 32.0 36.0 49 34.38125599107629 36.0 36.0 36.0 32.0 36.0 50 33.935703593912336 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 14.0 21 21.0 22 97.0 23 256.0 24 674.0 25 1709.0 26 3741.0 27 7323.0 28 13190.0 29 21461.0 30 33425.0 31 51751.0 32 80832.0 33 142118.0 34 316385.0 35 894958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93722273470185 18.233706018722305 12.658990955266269 26.170080291309578 2 15.455862806176986 19.804526355266077 38.520770669258695 26.21884016929824 3 18.97898855515624 22.927443708524798 28.524032896352253 29.56953483996671 4 12.820449043212948 16.170606828252833 35.5810367127649 35.42790741576932 5 14.448100298668907 36.667395853330156 33.7078121402564 15.176691707744535 6 34.77282859160041 35.15695902374874 16.53604021028638 13.534172174364475 7 30.741085374152483 30.070339939169248 19.94416938729825 19.24440529938002 8 27.34596675801696 35.14828531649784 18.73297545787289 18.772772467612313 9 26.543648837308677 15.15577276672766 18.67933878288754 39.62123961307613 10 15.950437416332209 27.632454206333463 32.031171773205514 24.385936604128812 11 36.40399577284326 21.604418998735298 22.520643104370848 19.470942124050598 12 24.373117375030056 23.497391828985105 29.47319346130028 22.65629733468456 13 29.781237623225636 20.38671978887176 24.869495783366506 24.962546804536093 14 22.64443476447377 20.042769030018043 25.627743617969116 31.68505258753907 15 24.515914658373923 28.5028224626058 21.99078163495555 24.99048124406473 16 24.546094640893703 26.558214940801605 24.75177748241651 24.143912935888178 17 23.506448199791194 26.868530195662256 25.852494679382154 23.772526925164403 18 23.618231147087222 26.18271964611207 26.911695113504607 23.287354093296102 19 25.207706588892425 25.477930836113487 25.538519232351398 23.775843342642688 20 25.429078550186134 25.48692467184922 25.71582183904747 23.368174938917175 21 25.2344292604963 25.103558324622423 25.165613597821878 24.496398817059397 22 25.0608913382191 25.745795324744236 25.401908343149714 23.79140499388695 23 24.17062457707705 25.760336539841333 25.688395791466217 24.380643091615394 24 24.418744814065306 25.47847721505182 26.04067877467485 24.062099196208024 25 24.406136914730915 25.510123383721716 25.94470245938337 24.13903724216399 26 23.921747704333164 26.08494892069538 26.073022550406456 23.92028082456501 27 24.142463635662086 26.006743833193767 25.82440395139899 24.02638857974516 28 24.116767670067745 25.84777165365379 25.622634626202377 24.412826050076085 29 24.29932351116012 25.69739194323285 25.42416877079548 24.57911577481155 30 24.229274371818274 25.79496128035675 25.6895361933954 24.286228154429576 31 24.887401033448686 25.380272635549257 25.412607767829925 24.319718563172135 32 24.285561219023126 26.017383273892435 25.623874322042113 24.073181185042323 33 24.05156535404145 25.841671173607356 25.994737083788277 24.112026388562917 34 24.349818169758397 25.799931885409315 25.994900334577846 23.855349610254432 35 24.167163067283862 25.935199629580968 25.931883205757313 23.965754097377857 36 23.92973786908697 25.90141183718686 26.11053747009644 24.05831282362973 37 24.222063484977006 25.668301518562693 25.561855439975 24.547779556485303 38 24.2995976927924 26.0889336180352 25.53419866373801 24.077270025434387 39 24.762108850826305 25.632292990055767 25.418446066951372 24.187152092166556 40 25.10542387669042 25.46244920138065 25.575526354055857 23.85660056787308 41 24.606905102357103 25.497052824658056 25.909312972035952 23.986729100948885 42 24.406473730367537 26.056541497249462 25.793000079725743 23.743984692657257 43 24.06300705152409 25.763574949231067 26.15180421050483 24.021613788740012 44 23.982526991448456 25.835956793273056 25.737353817580665 24.44416239769782 45 24.13276714726153 25.931330592543745 25.586669711043562 24.349232549151168 46 24.329861007027777 25.35421108589017 25.737712550568553 24.578215356513496 47 24.58134585421263 25.630109806427665 25.625007573626814 24.163536765732893 48 24.278273980361092 25.856874255377228 25.398620327213077 24.466231437048602 49 24.45044116502774 25.59994489423392 25.51683978636311 24.43277415437523 50 24.20507365058956 26.226191751746235 25.32877449704836 24.239960100615836 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 3.5 2 5.0 3 25.5 4 46.0 5 74.5 6 103.0 7 92.0 8 81.0 9 112.5 10 144.0 11 251.0 12 358.0 13 649.0 14 940.0 15 1295.0 16 1650.0 17 1735.5 18 1821.0 19 2064.0 20 2307.0 21 3025.0 22 3743.0 23 4862.5 24 5982.0 25 7860.0 26 9738.0 27 13264.5 28 16791.0 29 20869.0 30 24947.0 31 30014.0 32 35081.0 33 41417.0 34 47753.0 35 55064.0 36 62375.0 37 67403.5 38 72432.0 39 75547.0 40 78662.0 41 82454.0 42 86246.0 43 90183.0 44 94120.0 45 99370.5 46 104621.0 47 108322.5 48 112024.0 49 114579.0 50 117134.0 51 116294.5 52 115455.0 53 114085.0 54 112715.0 55 108758.0 56 104801.0 57 98901.5 58 93002.0 59 85839.0 60 78676.0 61 68606.0 62 58536.0 63 50342.5 64 42149.0 65 35082.0 66 28015.0 67 24037.5 68 20060.0 69 16655.5 70 13251.0 71 10631.5 72 8012.0 73 6737.0 74 5462.0 75 4421.5 76 3381.0 77 2775.0 78 2169.0 79 1829.5 80 1490.0 81 1172.5 82 855.0 83 649.0 84 443.0 85 324.0 86 205.0 87 145.0 88 85.0 89 58.0 90 31.0 91 22.0 92 13.0 93 13.0 94 13.0 95 15.0 96 17.0 97 13.5 98 10.0 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.026467562567085705 2 0.004655739921439172 3 1.2755451839559375E-4 4 6.377725919779688E-5 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.739953327801719E-4 17 0.0 18 1.9133177759339065E-4 19 0.0 20 2.551090367911875E-4 21 0.0 22 0.0 23 0.0 24 8.928816287691563E-4 25 1.9133177759339065E-4 26 1.9133177759339065E-4 27 3.826635551867813E-4 28 0.0014668769615493282 29 5.10218073582375E-4 30 0.0012117679247581406 31 1.9133177759339065E-4 32 8.291043695713594E-4 33 3.188862959889844E-4 34 7.015498511757657E-4 35 1.9133177759339065E-4 36 0.0 37 0.0017219859983405156 38 6.377725919779688E-5 39 8.291043695713594E-4 40 6.377725919779688E-5 41 9.566588879669531E-4 42 0.0052297352542193445 43 0.004400630884647985 44 0.0033801947374832346 45 0.002487313108714078 46 0.0022959813311206876 47 0.00102043614716475 48 0.0031250857006920466 49 0.004017967329461204 50 8.291043695713594E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1567957.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.062937949443125 #Duplication Level Percentage of deduplicated Percentage of total 1 68.65464846930709 37.80326648606287 2 16.32862878837038 17.982045475470578 3 6.567973789404589 10.849557996586611 4 3.1444234591191065 6.9256477526499465 5 1.7384428895221522 4.786188647720444 6 1.0300452201770194 3.403038962623662 7 0.642944650365144 2.4781694971587633 8 0.4219992163168468 1.858921333021453 9 0.28746041894817614 1.4245573690317914 >10 1.138105199978323 10.07771874814986 >50 0.03296385953342797 1.2269269616191674 >100 0.012014155930664884 1.0736973912966055 >500 3.498830270805152E-4 0.11026337860817004 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.551090367911875E-4 2 0.0 0.0 0.0 0.0 2.551090367911875E-4 3 0.0 0.0 0.0 0.0 2.551090367911875E-4 4 0.0 0.0 0.0 0.0 2.551090367911875E-4 5 0.0 0.0 0.0 0.0 3.188862959889844E-4 6 0.0 0.0 0.0 0.0 4.4644081438457815E-4 7 0.0 0.0 0.0 6.377725919779688E-5 4.4644081438457815E-4 8 0.0 0.0 0.0 6.377725919779688E-5 4.4644081438457815E-4 9 0.0 0.0 0.0 6.377725919779688E-5 4.4644081438457815E-4 10 0.0 0.0 0.0 6.377725919779688E-5 4.4644081438457815E-4 11 0.0 0.0 0.0 6.377725919779688E-5 5.10218073582375E-4 12 0.0 0.0 0.0 6.377725919779688E-5 5.739953327801719E-4 13 0.0 0.0 0.0 6.377725919779688E-5 7.015498511757657E-4 14 0.0 0.0 0.0 6.377725919779688E-5 0.001084213406362547 15 0.0 0.0 0.0 6.377725919779688E-5 0.001084213406362547 16 0.0 0.0 0.0 3.188862959889844E-4 0.0011479906655603438 17 0.0 0.0 0.0 3.188862959889844E-4 0.0011479906655603438 18 0.0 0.0 0.0 3.188862959889844E-4 0.0011479906655603438 19 0.0 0.0 0.0 3.8266355518678125E-4 0.0011479906655603438 20 0.0 0.0 0.0 7.015498511757657E-4 0.0011479906655603438 21 0.0 0.0 0.0 8.928816287691563E-4 0.0012117679247581406 22 0.0 0.0 0.0 0.0011479906655603438 0.0012117679247581406 23 0.0 0.0 0.0 0.0014030997023515314 0.0012117679247581406 24 0.0 0.0 0.0 0.002487313108714078 0.0012117679247581406 25 0.0 0.0 0.0 0.003125085700692047 0.0012117679247581406 26 0.0 0.0 0.0 0.003762858292670016 0.0012117679247581406 27 0.0 0.0 0.0 0.004464408143845781 0.0012755451839559376 28 0.0 0.0 0.0 0.005484844291010532 0.0012755451839559376 29 0.0 0.0 0.0 0.007461939326142235 0.0013393224431537344 30 0.0 0.0 0.0 0.010459470508438687 0.0013393224431537344 31 0.0 0.0 0.0 0.01594431479944922 0.0013393224431537344 32 0.0 0.0 0.0 0.022768481533613487 0.0014030997023515314 33 0.0 0.0 0.0 0.03042175263734911 0.0014668769615493282 34 0.0 0.0 0.0 0.03915923714744728 0.0014668769615493282 35 0.0 0.0 0.0 0.04713139454717189 0.0014668769615493282 36 0.0 0.0 0.0 0.05663420616764363 0.0014668769615493282 37 0.0 0.0 0.0 0.07461939326142235 0.0014668769615493282 38 0.0 0.0 0.0 0.09942874708936533 0.0014668769615493282 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1425 0.0 26.097168 1 GGTATCA 620 0.0 25.909122 1 GTCCTAC 1225 0.0 21.196661 1 GATTTCG 480 0.0 20.168682 41 GTAGGAC 1215 0.0 19.916512 3 TCCTACA 1355 0.0 19.158144 2 ATTTCGT 500 0.0 18.922495 42 GTATAGG 280 0.0 18.861437 1 TAGGACG 905 0.0 18.474041 4 TGTAGGA 1390 0.0 18.359207 2 CTGTAGG 1250 0.0 18.308168 1 TAGGACC 665 0.0 18.194407 4 TATCAAC 2055 0.0 17.877853 2 TCAACGC 2065 0.0 17.790709 4 TTTCGTC 560 0.0 17.287443 43 ATCAACG 2115 0.0 17.266113 3 CAACGCA 2145 0.0 17.127186 5 CCTACAG 1465 0.0 16.667952 3 AACGCAG 2240 0.0 16.49902 6 TTCGTCA 575 0.0 16.45382 44 >>END_MODULE