##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062028_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1762428 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30240497767852 32.0 32.0 32.0 32.0 32.0 2 31.477477661498796 32.0 32.0 32.0 32.0 32.0 3 31.59052000989544 32.0 32.0 32.0 32.0 32.0 4 31.660242574448432 32.0 32.0 32.0 32.0 32.0 5 31.635439291704397 32.0 32.0 32.0 32.0 32.0 6 35.28873066020286 36.0 36.0 36.0 36.0 36.0 7 35.29129587137744 36.0 36.0 36.0 36.0 36.0 8 35.23959617073719 36.0 36.0 36.0 36.0 36.0 9 35.32454602400779 36.0 36.0 36.0 36.0 36.0 10 35.20702235779277 36.0 36.0 36.0 36.0 36.0 11 35.32691775210108 36.0 36.0 36.0 36.0 36.0 12 35.237595521632656 36.0 36.0 36.0 36.0 36.0 13 35.280649195314645 36.0 36.0 36.0 36.0 36.0 14 35.24767990522166 36.0 36.0 36.0 36.0 36.0 15 35.219132356045186 36.0 36.0 36.0 36.0 36.0 16 35.22596100379703 36.0 36.0 36.0 36.0 36.0 17 35.21063952683457 36.0 36.0 36.0 36.0 36.0 18 35.210772865614935 36.0 36.0 36.0 36.0 36.0 19 35.19448510804413 36.0 36.0 36.0 36.0 36.0 20 35.19362266146475 36.0 36.0 36.0 36.0 36.0 21 35.17782286709017 36.0 36.0 36.0 36.0 36.0 22 35.15951914064007 36.0 36.0 36.0 36.0 36.0 23 35.13317650423166 36.0 36.0 36.0 36.0 36.0 24 35.11363187602557 36.0 36.0 36.0 36.0 36.0 25 35.08669006620412 36.0 36.0 36.0 36.0 36.0 26 35.048001393532104 36.0 36.0 36.0 36.0 36.0 27 35.02980944469788 36.0 36.0 36.0 36.0 36.0 28 34.997784874048754 36.0 36.0 36.0 36.0 36.0 29 34.972872083285104 36.0 36.0 36.0 36.0 36.0 30 34.94111475759577 36.0 36.0 36.0 36.0 36.0 31 34.946857970935554 36.0 36.0 36.0 36.0 36.0 32 34.915662370320945 36.0 36.0 36.0 32.0 36.0 33 34.91351249526222 36.0 36.0 36.0 32.0 36.0 34 34.89680599718116 36.0 36.0 36.0 32.0 36.0 35 34.888048760006086 36.0 36.0 36.0 32.0 36.0 36 34.84338026858402 36.0 36.0 36.0 32.0 36.0 37 34.81436404777954 36.0 36.0 36.0 32.0 36.0 38 34.79728420111346 36.0 36.0 36.0 32.0 36.0 39 34.741336951069776 36.0 36.0 36.0 32.0 36.0 40 34.74995914726729 36.0 36.0 36.0 32.0 36.0 41 34.72726829124367 36.0 36.0 36.0 32.0 36.0 42 34.68591341036343 36.0 36.0 36.0 32.0 36.0 43 34.70467389306116 36.0 36.0 36.0 32.0 36.0 44 34.618569950091576 36.0 36.0 36.0 32.0 36.0 45 34.61770636871407 36.0 36.0 36.0 32.0 36.0 46 34.555289634526915 36.0 36.0 36.0 32.0 36.0 47 34.55145344944588 36.0 36.0 36.0 32.0 36.0 48 34.51550588165871 36.0 36.0 36.0 32.0 36.0 49 34.49771678616091 36.0 36.0 36.0 32.0 36.0 50 34.091779068421516 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 19.0 21 40.0 22 141.0 23 380.0 24 799.0 25 1927.0 26 3960.0 27 7878.0 28 13831.0 29 22196.0 30 33367.0 31 49602.0 32 75870.0 33 130050.0 34 299448.0 35 1122914.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.98971161066333 18.87860131937937 12.664816001462068 25.466871068495234 2 15.390839601962611 20.668460864971543 38.44918168782879 25.49151784523706 3 18.09034277281081 24.78023128412564 28.99346977821985 28.1359561648437 4 11.840149975006058 16.7455446381609 36.95846693224741 34.45583845458564 5 13.925845481347324 37.84097846834027 33.24652127633016 14.986654773982256 6 33.30040523687236 36.6833557834485 17.101200277344976 12.915038702334169 7 29.86771658189725 30.87853801687218 20.751372538339155 18.50237286289142 8 27.53735188047398 33.97330273917573 19.41208378441559 19.0772615959347 9 27.437546384873595 14.080688686289596 19.08787195845731 39.393892970379504 10 16.502064197799854 26.779306729125956 30.916780713878804 25.801848359195382 11 36.78408422925646 21.36546854680021 23.071410576772497 18.779036647170834 12 24.891002639540453 24.140844335201212 29.033639955788264 21.93451306947007 13 29.092933158120506 20.149872789129542 25.512872015197217 25.24432203755274 14 23.310228843391048 21.020035995796707 25.164262029427586 30.505473131384658 15 24.467893156486394 29.226555638017555 21.99011817787734 24.315433027618717 16 24.875724361996877 26.313128648052412 25.110345872392 23.70080111755871 17 23.225516162929775 27.170244685172957 25.523709337345977 24.08052981455129 18 24.05492432302084 25.306608791863482 27.82223357022285 22.816233314892834 19 25.45267097436037 25.13912625083124 25.726497763312885 23.681705011495506 20 25.85111519765686 24.716257107402704 25.31066605463047 24.121961640309962 21 26.79865503725542 24.591926592178517 24.464829201533338 24.14458916903272 22 25.975585953014818 25.521553220897538 25.252265624468063 23.250595201619582 23 23.42555091674771 25.54036311311794 26.354978875708824 24.679107094425525 24 24.542032052791498 25.45385425030002 26.29900618756756 23.705107509340927 25 24.24318765337532 25.358979814743886 26.079691334383025 24.318141197497766 26 23.321045312101933 26.86060822016987 26.66842939343097 23.14991707429723 27 24.530304921641832 25.697563577353865 25.613871835317347 24.158259665686955 28 23.65248939229391 25.760242578577596 26.18239466908156 24.404873360046935 29 23.97853403676086 25.375705422890597 26.01732392655999 24.62843661378856 30 23.53448838377104 25.700959768044235 26.687679619610705 24.07687222857402 31 25.011645951719657 25.149922123903846 25.390047179580293 24.448384744796204 32 24.431405525142758 25.678216720683427 25.155298181587092 24.73507957258672 33 23.42231315768868 25.60692047648066 26.433964169761836 24.53680219606882 34 24.59505848509006 25.665124275496975 26.49086622617261 23.248951013240355 35 25.036795871145795 25.23907386749855 26.497055762908627 23.227074498447024 36 23.137381732555994 26.032143211767877 26.204803041264167 24.62567201441196 37 24.815889740949107 25.786841201887206 25.233333049628488 24.1639360075352 38 23.856123484193397 25.670438735653317 25.85966632395763 24.613771456195657 39 25.395437510461498 24.944238445542055 25.250239018619336 24.41008502537711 40 25.514361729592206 25.172163159098222 26.075292763898872 23.238182347410703 41 24.13041776034698 25.77556261412008 26.52754939576645 23.56647022976649 42 25.428931825416505 26.376760937002615 25.68535182992187 22.50895540765901 43 24.401849802820095 25.310920078304537 26.209095809572446 24.07813430930292 44 23.702823564258342 26.092818270181752 25.54207542555467 24.66228274000523 45 24.06568795949598 26.44813046806246 25.491590127741087 23.994591444700472 46 23.903346885044982 25.681845907676244 25.72105413970273 24.69375306757604 47 24.60007773468641 25.140759360078984 26.06409990893126 24.195062996303346 48 24.873918490744188 26.192610783770782 24.740573960253116 24.192896765231918 49 24.23802760718965 26.27018095549905 25.087964084665682 24.403827352645617 50 24.296966007091477 26.765081874288256 24.84077083653683 24.097181282083437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 213.0 1 133.5 2 54.0 3 147.0 4 240.0 5 253.0 6 266.0 7 220.0 8 174.0 9 246.5 10 319.0 11 563.5 12 808.0 13 1436.5 14 2065.0 15 2736.5 16 3408.0 17 3467.5 18 3527.0 19 3597.5 20 3668.0 21 4443.5 22 5219.0 23 6420.0 24 7621.0 25 10165.5 26 12710.0 27 16979.0 28 21248.0 29 25871.0 30 30494.0 31 36157.0 32 41820.0 33 49333.0 34 56846.0 35 65278.5 36 73711.0 37 80983.5 38 88256.0 39 89642.5 40 91029.0 41 94838.5 42 98648.0 43 97017.0 44 95386.0 45 102860.5 46 110335.0 47 116224.5 48 122114.0 49 127467.0 50 132820.0 51 122941.5 52 113063.0 53 112722.5 54 112382.0 55 114126.0 56 115870.0 57 112552.0 58 109234.0 59 98892.5 60 88551.0 61 76904.0 62 65257.0 63 55966.0 64 46675.0 65 39446.5 66 32218.0 67 28495.5 68 24773.0 69 22487.5 70 20202.0 71 15528.0 72 10854.0 73 9509.0 74 8164.0 75 5776.5 76 3389.0 77 3361.0 78 3333.0 79 2797.5 80 2262.0 81 1760.5 82 1259.0 83 1137.5 84 1016.0 85 779.0 86 542.0 87 380.5 88 219.0 89 146.5 90 74.0 91 52.0 92 30.0 93 27.0 94 24.0 95 19.0 96 14.0 97 14.0 98 14.0 99 12.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030582809623995986 2 0.004595932429580102 3 3.9717934576618164E-4 4 5.673990653802595E-5 5 0.0 6 1.134798130760519E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.510985980703892E-4 17 0.0 18 1.7021971961407784E-4 19 0.0 20 2.8369953269012974E-4 21 0.0 22 0.0 23 1.134798130760519E-4 24 0.0013050178503745968 25 1.7021971961407784E-4 26 3.9717934576618164E-4 27 4.539192523042076E-4 28 0.0017021971961407784 29 5.673990653802595E-4 30 0.0013050178503745968 31 7.376187849943373E-4 32 6.808788784563114E-4 33 3.404394392281557E-4 34 7.376187849943373E-4 35 1.134798130760519E-4 36 1.7021971961407784E-4 37 0.0018724169157548563 38 0.0 39 7.376187849943373E-4 40 5.673990653802595E-5 41 0.0017021971961407784 42 0.004822892055732206 43 0.004425712709966024 44 0.004595932429580102 45 0.0019858967288309084 46 0.002439815981135116 47 0.0013050178503745968 48 0.004312232896889972 49 0.0034611342988195835 50 0.0017589371026788046 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1762428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.07288004739921 #Duplication Level Percentage of deduplicated Percentage of total 1 72.49885402873703 35.57727567326117 2 16.00363315345405 15.706887401240632 3 5.5568133054008735 8.18066498345187 4 2.38015238476374 4.672037298881686 5 1.1507106269619367 2.8234342283085327 6 0.6389230674653118 1.881227702954496 7 0.37929019047124135 1.3029003414105296 8 0.2510049663508358 0.9854029284028832 9 0.1804728484207795 0.7970690198128836 >10 0.7828264517563938 6.815544207008715 >50 0.07531604566921896 2.613673799970797 >100 0.08164937236317157 8.593251321006894 >500 0.013491501425742732 4.655071794255938 >1k 0.006862056759645009 5.395559300032921 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3237 0.18366707746359 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2956 0.1677231637264047 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2859 0.1622193927922162 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2808 0.15932565755877687 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2764 0.15682910167110373 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2643 0.14996357298000257 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2316 0.13140962354206812 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2199 0.12477105447711906 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2108 0.11960772298215872 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 2006 0.11382025251528007 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC 2006 0.11382025251528007 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 2003 0.11365003279566598 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1943 0.11024563840338442 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1934 0.10973497924454219 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 1872 0.10621710503918458 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1870 0.10610362522610853 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 1864 0.10576318578688036 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 1824 0.10349358952535934 No Hit GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT 1790 0.10156443270306645 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.7021971961407784E-4 7 0.0 0.0 0.0 0.0 1.7021971961407784E-4 8 0.0 0.0 0.0 0.0 1.7021971961407784E-4 9 0.0 0.0 0.0 0.0 1.7021971961407784E-4 10 0.0 0.0 0.0 0.0 1.7021971961407784E-4 11 0.0 0.0 0.0 0.0 1.7021971961407784E-4 12 0.0 0.0 0.0 0.0 1.7021971961407784E-4 13 0.0 0.0 0.0 0.0 1.7021971961407784E-4 14 0.0 0.0 0.0 0.0 1.7021971961407784E-4 15 0.0 0.0 0.0 5.673990653802595E-5 1.7021971961407784E-4 16 0.0 0.0 0.0 1.7021971961407784E-4 1.7021971961407784E-4 17 0.0 0.0 0.0 1.7021971961407784E-4 2.269596261521038E-4 18 0.0 0.0 0.0 2.269596261521038E-4 2.269596261521038E-4 19 0.0 0.0 0.0 2.269596261521038E-4 2.269596261521038E-4 20 0.0 0.0 0.0 2.8369953269012974E-4 2.269596261521038E-4 21 0.0 0.0 0.0 3.404394392281557E-4 2.269596261521038E-4 22 0.0 0.0 0.0 4.539192523042076E-4 2.269596261521038E-4 23 0.0 0.0 0.0 7.376187849943373E-4 2.269596261521038E-4 24 0.0 0.0 0.0 9.078385046084152E-4 2.269596261521038E-4 25 0.0 0.0 0.0 0.001078058224222493 2.269596261521038E-4 26 0.0 0.0 0.0 0.0012482779438365709 2.269596261521038E-4 27 0.0 0.0 0.0 0.0015319774765267006 2.269596261521038E-4 28 0.0 0.0 0.0 0.002269596261521038 2.269596261521038E-4 29 0.0 0.0 0.0 0.003177434766129453 2.269596261521038E-4 30 0.0 0.0 0.0 0.004595932429580102 2.269596261521038E-4 31 0.0 0.0 0.0 0.008624465793779944 2.269596261521038E-4 32 0.0 0.0 0.0 0.012823218877593865 2.269596261521038E-4 33 0.0 0.0 0.0 0.017475891213711993 2.269596261521038E-4 34 0.0 0.0 0.0 0.02201508373675407 2.269596261521038E-4 35 0.0 0.0 0.0 0.026667756072872195 2.269596261521038E-4 36 0.0 0.0 0.0 0.034497863175119776 2.269596261521038E-4 37 0.0 0.0 0.0 0.04624302382849115 2.269596261521038E-4 38 0.0 0.0 0.0 0.06105213943491592 2.269596261521038E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1260 0.0 27.417452 1 GTATCAA 3170 0.0 26.723877 1 TGTAGGA 1660 0.0 20.939827 2 GTAGGAC 1695 0.0 20.506277 3 TTAGGAC 930 0.0 19.869904 3 GTCCTAC 1420 0.0 19.67947 1 CTGTAGG 1670 0.0 19.632147 1 ATTGCGA 90 1.002604E-5 19.555063 17 TAGGACG 1470 0.0 19.454742 4 GACGTGA 850 0.0 19.151917 7 GGACGTG 1500 0.0 19.065645 6 GTCGTAA 70 8.1251626E-4 18.857203 30 TACCGTC 780 0.0 18.614388 7 AGGACGT 1570 0.0 18.355705 5 ATACCGT 780 0.0 18.332352 6 GATATAC 410 0.0 18.247066 1 AACGCAG 4725 0.0 18.064642 6 TCAACGC 4715 0.0 18.056297 4 ATCAACG 4725 0.0 18.018084 3 TAGGACA 490 0.0 17.958221 4 >>END_MODULE