##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062027_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1108869 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9301531560536 32.0 32.0 32.0 32.0 32.0 2 31.31098804277151 32.0 32.0 32.0 32.0 32.0 3 31.482442019751655 32.0 32.0 32.0 32.0 32.0 4 31.59636981464898 32.0 32.0 32.0 32.0 32.0 5 31.520072253800944 32.0 32.0 32.0 32.0 32.0 6 35.2021943078939 36.0 36.0 36.0 36.0 36.0 7 35.19675813824717 36.0 36.0 36.0 36.0 36.0 8 35.1369115738649 36.0 36.0 36.0 36.0 36.0 9 35.26129596913612 36.0 36.0 36.0 36.0 36.0 10 35.100702607792265 36.0 36.0 36.0 36.0 36.0 11 35.27468528744153 36.0 36.0 36.0 36.0 36.0 12 35.17102921986276 36.0 36.0 36.0 36.0 36.0 13 35.23042577617374 36.0 36.0 36.0 36.0 36.0 14 35.18252561844546 36.0 36.0 36.0 36.0 36.0 15 35.15400286237599 36.0 36.0 36.0 36.0 36.0 16 35.15828470270158 36.0 36.0 36.0 36.0 36.0 17 35.14847109983235 36.0 36.0 36.0 36.0 36.0 18 35.14500360277003 36.0 36.0 36.0 36.0 36.0 19 35.13912013051136 36.0 36.0 36.0 36.0 36.0 20 35.137465291211136 36.0 36.0 36.0 36.0 36.0 21 35.12820901296727 36.0 36.0 36.0 36.0 36.0 22 35.11653585770727 36.0 36.0 36.0 36.0 36.0 23 35.08304768191734 36.0 36.0 36.0 36.0 36.0 24 35.0618440951997 36.0 36.0 36.0 36.0 36.0 25 35.04143861898926 36.0 36.0 36.0 36.0 36.0 26 35.002204047547544 36.0 36.0 36.0 36.0 36.0 27 34.992406677434396 36.0 36.0 36.0 36.0 36.0 28 34.960769035837416 36.0 36.0 36.0 36.0 36.0 29 34.94530463021331 36.0 36.0 36.0 36.0 36.0 30 34.92239209500852 36.0 36.0 36.0 32.0 36.0 31 34.92819620712636 36.0 36.0 36.0 32.0 36.0 32 34.897601069197535 36.0 36.0 36.0 32.0 36.0 33 34.88740689838024 36.0 36.0 36.0 32.0 36.0 34 34.877409324275455 36.0 36.0 36.0 32.0 36.0 35 34.856100224643306 36.0 36.0 36.0 32.0 36.0 36 34.82713106778168 36.0 36.0 36.0 32.0 36.0 37 34.82560699234986 36.0 36.0 36.0 32.0 36.0 38 34.79906733798131 36.0 36.0 36.0 32.0 36.0 39 34.78110849883981 36.0 36.0 36.0 32.0 36.0 40 34.77042644352038 36.0 36.0 36.0 32.0 36.0 41 34.74981174512048 36.0 36.0 36.0 32.0 36.0 42 34.70990441612129 36.0 36.0 36.0 32.0 36.0 43 34.71593849228358 36.0 36.0 36.0 32.0 36.0 44 34.66023488798046 36.0 36.0 36.0 32.0 36.0 45 34.64892516609266 36.0 36.0 36.0 32.0 36.0 46 34.62827980582016 36.0 36.0 36.0 32.0 36.0 47 34.60061828764263 36.0 36.0 36.0 32.0 36.0 48 34.57180334196375 36.0 36.0 36.0 32.0 36.0 49 34.5600517283827 36.0 36.0 36.0 32.0 36.0 50 34.121604986702664 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 11.0 21 30.0 22 67.0 23 178.0 24 476.0 25 1169.0 26 2488.0 27 4842.0 28 8185.0 29 13462.0 30 20850.0 31 32299.0 32 50648.0 33 90568.0 34 206579.0 35 677015.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.214502862359566 18.4882447502359 12.353431493713273 25.94382089369126 2 16.203668213952994 19.66535686940116 37.21189044599544 26.91908447065041 3 18.687453048922908 22.83186351474072 28.535252649776755 29.945430786559612 4 12.816933289685256 15.97222034343101 35.06040839810654 36.1504379687772 5 14.97399602658204 36.33801648346198 32.873675790377405 15.814311699578578 6 35.449607572414 34.66376039687356 16.197073228800207 13.689558801912222 7 31.38432042017587 29.91309162759532 19.623778823287513 19.07880912894129 8 28.31434551782041 33.37589922705027 18.61653630861716 19.693218946512168 9 26.953589648551812 14.588287705761458 18.704283373419223 39.75383927226751 10 16.939452612441347 26.31190214876987 30.34051874571071 26.408126493078072 11 37.42678350643764 21.12891603967646 21.765330259931513 19.67897019395438 12 24.64520155221221 23.546785057567664 28.161937974639024 23.646075415581098 13 29.448474075837634 19.13968196423563 25.159419191987514 26.252424767939225 14 23.607838256818432 19.568767816577072 24.609399306861317 32.21399461974318 15 25.393802153365275 27.02564504914467 21.67641082941267 25.904141968077383 16 26.044088443827995 25.76957276919941 23.327158834913632 24.85917995205896 17 24.215484426023274 26.16891625611321 24.767307950713747 24.848291367149773 18 25.163725824400785 25.044234379988207 25.70527006870082 24.086769726910195 19 25.845974592129455 25.009536744196115 24.991229802618705 24.153258861055722 20 25.848075147177653 24.563787804455732 24.590481790372852 24.997655257993767 21 26.759518031435636 24.192307657622315 24.337230096611954 24.710944214330098 22 25.97385263723668 24.28970419409326 24.827278966225947 24.90916420244411 23 24.584621433750456 24.36430666228983 25.39508760285264 25.655984301107075 24 24.98780275544998 24.7630668336855 25.13435005595852 25.114780354905996 25 25.052643729782325 24.365276691836456 25.28269795620583 25.29938162217539 26 24.696153273843073 25.22236701492066 25.537644348049582 24.54383536318668 27 25.301389530185848 24.78238990534457 24.841188820270112 25.075031744199467 28 24.847228284591882 24.560352944147237 25.45470778576608 25.137710985494806 29 24.790167946806775 24.921563800036616 25.290590451660844 24.997677801495765 30 24.749221488627377 24.87764317349463 25.543199377371266 24.829935960506724 31 25.28522510936898 24.722124774881614 24.624547170474926 25.368102945274472 32 25.26901502443951 24.828201937124614 24.450426564219107 25.452356474216764 33 24.778827302225164 24.571768173136064 25.049916040048263 25.59948848459051 34 25.378969268521 24.652188773545515 25.367425912849466 24.60141604508402 35 25.817229823567818 24.542596594003978 25.24349156076287 24.396682021665338 36 24.58831889819167 25.043918662996855 25.048067037735784 25.31969540107569 37 25.684896298340448 24.855481424966676 24.740768396921506 24.71885387977137 38 25.021440765320342 24.610120762687025 25.25113426383098 25.11730420816165 39 25.590828828731333 24.517570202350868 24.604145135661117 25.28745583325668 40 25.870797966935648 24.650183791037346 24.970420284470286 24.508597957556717 41 24.75199754703028 25.156106271305667 25.36677308226467 24.725123099399383 42 25.876624577143232 25.091470535980815 24.90641010725749 24.12549477961846 43 25.293597756193464 24.272882227212467 25.161386326127538 25.272133690466525 44 24.77349917841032 25.05280359587528 24.998602125130542 25.17509510058386 45 25.048338455766704 25.01704471667893 24.939847481350014 24.99476934620435 46 25.04975898344674 24.82871817070916 24.9229603776903 25.198562468153803 47 25.220135995526938 24.76299983767112 25.25530725249355 24.76155691430839 48 25.868344585393306 25.183120286715592 24.1670980507452 24.781437077145902 49 25.108244238322204 25.3671646367584 24.5552313915055 24.9693597334139 50 25.17080666921584 25.38977107938272 24.453220255831233 24.98620199557021 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 104.0 1 67.0 2 30.0 3 78.5 4 127.0 5 133.0 6 139.0 7 121.5 8 104.0 9 124.5 10 145.0 11 258.0 12 371.0 13 742.5 14 1114.0 15 1380.5 16 1647.0 17 1763.0 18 1879.0 19 1915.0 20 1951.0 21 2364.5 22 2778.0 23 3417.0 24 4056.0 25 5294.5 26 6533.0 27 8367.5 28 10202.0 29 11880.0 30 13558.0 31 15446.5 32 17335.0 33 19783.0 34 22231.0 35 25839.0 36 29447.0 37 35114.5 38 40782.0 39 44074.0 40 47366.0 41 51455.0 42 55544.0 43 57427.5 44 59311.0 45 65080.5 46 70850.0 47 75415.5 48 79981.0 49 83200.5 50 86420.0 51 84836.0 52 83252.0 53 82759.5 54 82267.0 55 83396.5 56 84526.0 57 81415.0 58 78304.0 59 71653.0 60 65002.0 61 56863.0 62 48724.0 63 41864.5 64 35005.0 65 29520.5 66 24036.0 67 20682.0 68 17328.0 69 15562.5 70 13797.0 71 10897.5 72 7998.0 73 7009.0 74 6020.0 75 4403.5 76 2787.0 77 2432.5 78 2078.0 79 1809.0 80 1540.0 81 1260.0 82 980.0 83 801.0 84 622.0 85 487.0 86 352.0 87 239.0 88 126.0 89 88.0 90 50.0 91 37.5 92 25.0 93 19.5 94 14.0 95 14.5 96 15.0 97 14.0 98 13.0 99 8.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030932418527346333 2 0.004148370997836535 3 1.803639564276754E-4 4 0.0 5 0.0 6 1.803639564276754E-4 7 0.0 8 0.0 9 0.0 10 1.803639564276754E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.312738474968639E-4 17 0.0 18 2.7054593464151313E-4 19 0.0 20 4.5090989106918853E-4 21 0.0 22 0.0 23 9.01819782138377E-5 24 0.0010821837385660525 25 0.0 26 3.607279128553508E-4 27 4.5090989106918853E-4 28 0.0022545494553459426 29 5.410918692830263E-4 30 0.0019840035207044295 31 7.214558257107016E-4 32 8.116378039245394E-4 33 6.312738474968639E-4 34 5.410918692830263E-4 35 9.01819782138377E-5 36 9.01819782138377E-5 37 0.0013527296732075656 38 0.0 39 2.7054593464151313E-4 40 9.01819782138377E-5 41 8.116378039245394E-4 42 0.003787643084981184 43 0.0035170971503396702 44 0.0038778250631950214 45 0.001893821542490592 46 0.002164367477132105 47 8.116378039245394E-4 48 0.00315636923748432 49 0.0030661872592704824 50 0.0011723657167798903 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1108869.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.71081722220002 #Duplication Level Percentage of deduplicated Percentage of total 1 79.46777108880161 45.861500123614604 2 12.750435019474082 14.71676049824814 3 3.499313384348688 6.058447053820359 4 1.3949682133718726 3.2201902237073226 5 0.7466168492026507 2.154393425967452 6 0.4288010497524696 1.4847875404171362 7 0.29160217375073627 1.1780019825647465 8 0.21113566744615248 0.974784953045769 9 0.1625178036335787 0.844113173476577 >10 0.8855006766862781 9.367338500014805 >50 0.08500713967338389 3.451375074014433 >100 0.06942031614968262 7.79443404520614 >500 0.005654141761887349 2.092069160323085 >1k 0.0012564759470860775 0.8018042455793948 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1221 0.11011219539909584 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1145 0.10325836505484416 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1123 0.10127436153413974 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1123 0.10127436153413974 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1116 0.10064308768664289 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.01819782138377E-5 2 0.0 0.0 0.0 0.0 9.01819782138377E-5 3 0.0 0.0 0.0 0.0 9.01819782138377E-5 4 0.0 0.0 0.0 0.0 9.01819782138377E-5 5 0.0 0.0 0.0 0.0 9.01819782138377E-5 6 0.0 0.0 0.0 0.0 9.01819782138377E-5 7 0.0 0.0 0.0 0.0 9.01819782138377E-5 8 0.0 0.0 0.0 0.0 9.01819782138377E-5 9 0.0 0.0 0.0 0.0 9.01819782138377E-5 10 0.0 0.0 0.0 0.0 9.01819782138377E-5 11 0.0 0.0 0.0 0.0 9.01819782138377E-5 12 0.0 0.0 0.0 0.0 2.7054593464151313E-4 13 0.0 0.0 0.0 0.0 2.7054593464151313E-4 14 0.0 0.0 0.0 0.0 2.7054593464151313E-4 15 0.0 0.0 0.0 0.0 5.410918692830263E-4 16 0.0 0.0 0.0 2.7054593464151313E-4 5.410918692830263E-4 17 0.0 0.0 0.0 2.7054593464151313E-4 5.410918692830263E-4 18 0.0 0.0 0.0 2.7054593464151313E-4 7.214558257107016E-4 19 0.0 0.0 0.0 2.7054593464151313E-4 7.214558257107016E-4 20 0.0 0.0 0.0 4.5090989106918853E-4 9.920017603522147E-4 21 0.0 0.0 0.0 4.5090989106918853E-4 9.920017603522147E-4 22 0.0 0.0 0.0 5.410918692830263E-4 9.920017603522147E-4 23 0.0 0.0 0.0 8.116378039245393E-4 9.920017603522147E-4 24 0.0 0.0 0.0 0.0010821837385660525 9.920017603522147E-4 25 0.0 0.0 0.0 0.0016232756078490786 9.920017603522147E-4 26 0.0 0.0 0.0 0.0017134575860629163 9.920017603522147E-4 27 0.0 0.0 0.0 0.0018036395642767541 9.920017603522147E-4 28 0.0 0.0 0.0 0.00234473143355978 9.920017603522147E-4 29 0.0 0.0 0.0 0.0031563692374843196 9.920017603522147E-4 30 0.0 0.0 0.0 0.004509098910691885 9.920017603522147E-4 31 0.0 0.0 0.0 0.00820656001745923 9.920017603522147E-4 32 0.0 0.0 0.0 0.011723657167798902 9.920017603522147E-4 33 0.0 0.0 0.0 0.015601482230993923 9.920017603522147E-4 34 0.0 0.0 0.0 0.0212829468584657 0.00117236571677989 35 0.0 0.0 0.0 0.02507058994344688 0.00117236571677989 36 0.0 0.0 0.0 0.0322851482005539 0.00117236571677989 37 0.0 0.0 0.0 0.04355789547728361 0.00117236571677989 38 0.0 0.0 0.0 0.05537173462329635 0.00117236571677989 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1345 0.0 25.852371 1 CGGATCG 90 1.5128535E-8 24.443668 26 GGTATCA 725 0.0 23.373207 1 GTCTACG 50 0.0025753789 22.00724 1 ATCGATT 105 7.747258E-8 20.951715 29 GATTTCG 90 1.0001624E-5 19.559345 41 GCGTAGA 85 1.4270956E-4 18.12361 1 TATGCGA 85 1.4320339E-4 18.115438 12 ATACCGT 270 0.0 17.92374 6 CGTCGTA 260 0.0 17.767063 10 TACCGTC 250 0.0 17.597853 7 CTTACAC 250 0.0 17.597853 3 CCGTCGT 260 0.0 16.921013 9 GGTATAT 105 3.7632555E-5 16.767422 1 GTCCTAG 185 4.2018655E-10 16.654127 1 ACCGTCG 265 0.0 16.60175 8 CGAATGC 280 0.0 16.503197 43 GGATCGA 120 6.40751E-6 16.499475 27 GACGGAC 495 0.0 16.442438 7 TCAACGC 2090 0.0 16.313799 4 >>END_MODULE