##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062024_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 290719 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25995892941294 32.0 32.0 32.0 32.0 32.0 2 30.955156009755125 32.0 32.0 32.0 32.0 32.0 3 31.00283091232427 32.0 32.0 32.0 32.0 32.0 4 30.99568999618188 32.0 32.0 32.0 32.0 32.0 5 31.002548853016144 32.0 32.0 32.0 32.0 32.0 6 34.62306557190964 36.0 36.0 36.0 32.0 36.0 7 34.53180562673922 36.0 36.0 36.0 32.0 36.0 8 34.494955610056444 36.0 36.0 36.0 32.0 36.0 9 34.542596115148996 36.0 36.0 36.0 32.0 36.0 10 34.361706665199044 36.0 36.0 36.0 32.0 36.0 11 34.57750955389913 36.0 36.0 36.0 32.0 36.0 12 34.425001461892755 36.0 36.0 36.0 32.0 36.0 13 34.516385237978945 36.0 36.0 36.0 32.0 36.0 14 34.46493005273133 36.0 36.0 36.0 32.0 36.0 15 34.41137318166339 36.0 36.0 36.0 32.0 36.0 16 34.44358297875268 36.0 36.0 36.0 32.0 36.0 17 34.375145759307095 36.0 36.0 36.0 32.0 36.0 18 34.42660782405003 36.0 36.0 36.0 32.0 36.0 19 34.31339196956511 36.0 36.0 36.0 32.0 36.0 20 34.259508322469465 36.0 36.0 36.0 32.0 36.0 21 34.216449561260184 36.0 36.0 36.0 32.0 36.0 22 34.18142949033259 36.0 36.0 36.0 32.0 36.0 23 34.17278540446273 36.0 36.0 36.0 32.0 36.0 24 34.14404287301483 36.0 36.0 36.0 32.0 36.0 25 33.842552430353706 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 1.0 5 20.0 6 50.0 7 14.0 8 49.0 9 44.0 10 20.0 11 7.0 12 9.0 13 12.0 14 62.0 15 86.0 16 132.0 17 169.0 18 222.0 19 282.0 20 411.0 21 581.0 22 796.0 23 1055.0 24 1451.0 25 1935.0 26 2748.0 27 3526.0 28 4670.0 29 6300.0 30 8492.0 31 11839.0 32 17395.0 33 25660.0 34 60561.0 35 142119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.730268475998834 22.04186230500662 13.292399772973532 23.935469446021017 2 12.568193231929223 22.589244560020365 44.71756134811054 20.125000859939874 3 18.268499822852995 27.211155789611276 31.56897210020673 22.951372287329004 4 9.641277201769533 19.493770166977413 42.52832836827223 28.336624262980827 5 9.8573812513978 41.74824092074251 37.34822027629156 11.046157551568118 6 26.705650337808766 43.12491180489349 19.223951897958692 10.945485959339045 7 24.61719102400325 34.49120064458592 22.428284650797643 18.463323680613183 8 22.105071053981742 41.169988946775796 20.750104162003765 15.974835837238691 9 24.848912687890632 16.221353673444792 21.87021126396804 37.059522374696535 10 14.18573573780429 29.65820325953683 35.210850427762544 20.94521057489633 11 32.11343188988854 23.79238368167978 27.669775836651468 16.424408591780217 12 21.784190205242837 27.696244734603344 33.56283516854436 16.956729891609463 13 27.29934046253724 23.189199428286063 28.583974789481843 20.927485319694856 14 18.841188563400262 26.292953536661372 28.508510645624497 26.35734725431386 15 21.801981152871157 34.831712223079464 24.36418494434035 19.002121679709028 16 19.698404553891503 29.535898398355307 31.412691252079107 19.35300579567408 17 17.409931706174685 31.10485840138034 30.185319754927452 21.299890137517522 18 17.288303674728663 30.734188198997302 33.91032174535839 18.06718638091565 19 21.911667492976367 28.22570649479425 28.35722745551699 21.50539855671239 20 20.62356477162009 31.71876237265845 29.87237441428911 17.785298441432353 21 21.64757157217808 28.130379101887936 27.810559220038833 22.41149010589515 22 20.76926255190508 31.200203832884583 28.915347376684547 19.11518623852579 23 21.031651778798988 30.630109636667186 29.068690728214662 19.269547856319168 24 21.711826476157686 30.010673093475642 29.65398519538647 18.623515234980204 25 20.740322514011872 30.35480672569784 30.999283914234958 17.905586846055332 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 686.0 1 686.0 2 458.5 3 231.0 4 231.0 5 231.0 6 598.5 7 966.0 8 966.0 9 966.0 10 1002.0 11 1038.0 12 1038.0 13 1038.0 14 1384.5 15 1731.0 16 1731.0 17 1731.0 18 3423.5 19 5116.0 20 5116.0 21 5116.0 22 7905.5 23 10695.0 24 10695.0 25 10695.0 26 17290.5 27 23886.0 28 23886.0 29 23886.0 30 31132.5 31 38379.0 32 38379.0 33 38379.0 34 38636.0 35 38893.0 36 38893.0 37 38893.0 38 37787.0 39 36681.0 40 36681.0 41 36681.0 42 34967.5 43 33254.0 44 33254.0 45 33254.0 46 34039.0 47 34824.0 48 34824.0 49 34824.0 50 30290.0 51 25756.0 52 25756.0 53 25756.0 54 20797.0 55 15838.0 56 15838.0 57 15838.0 58 12873.5 59 9909.0 60 9909.0 61 9909.0 62 7858.0 63 5807.0 64 5807.0 65 5807.0 66 4727.0 67 3647.0 68 3647.0 69 3647.0 70 2737.5 71 1828.0 72 1828.0 73 1828.0 74 1406.5 75 985.0 76 985.0 77 985.0 78 665.0 79 345.0 80 345.0 81 345.0 82 211.5 83 78.0 84 78.0 85 78.0 86 52.0 87 26.0 88 26.0 89 26.0 90 21.0 91 16.0 92 16.0 93 16.0 94 14.0 95 12.0 96 12.0 97 12.0 98 52.0 99 92.0 100 92.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0013758990640446616 2 3.439747660111654E-4 3 0.0 4 0.007223470086234474 5 0.028893880344937894 6 0.05847571022189812 7 0.10319242980334964 8 0.10525627839941662 9 0.11144782418761759 10 0.12761463819014238 11 0.13587003257441033 12 0.13071041108424286 13 0.12520681482806423 14 0.10938397559155061 15 0.13174233538227634 16 0.1135116727836846 17 0.1224550166999749 18 0.10422435410138312 19 0.09321716158902582 20 0.08943343916290301 21 0.0835858681407132 22 0.09803280831318215 23 0.0736105999263894 24 0.0925292120570035 25 0.08633766626880253 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 290719.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.062641244638296 #Duplication Level Percentage of deduplicated Percentage of total 1 66.75267150213166 20.735142869919063 2 14.927191185427164 9.273559691661019 3 6.2233541885831345 5.799414554948249 4 2.9810088034992526 3.703920280408229 5 1.8382149382647694 2.854990557892673 6 1.1992691434582803 2.235148029540553 7 0.8637395493051326 1.8781022224209631 8 0.6655223963235701 1.6538306749816833 9 0.4828082608936382 1.3497569818278132 >10 3.395160843807098 21.231842432039187 >50 0.3853607219976745 8.313870094489868 >100 0.264658656774265 15.643628383421792 >500 0.01771773434472067 4.099147286555058 >1k 0.0033220751896351256 1.2276459398938493 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATATACACTGTTCTACAAATCCCG 1294 0.4451033472184481 No Hit GTATCAACGCAGAGTACTTTTTTTT 1184 0.40726612295721987 No Hit TTGTAGAACAGTGTATATCAATGAG 1091 0.3752764697181815 No Hit GTCCTAAAGTGTGTATTTCTCATTT 960 0.33021577537071883 No Hit GTGTATATCAATGAGTTACAATGAA 937 0.32230435575246197 No Hit CTGTAGGACGTGGAATATGGCAAGA 904 0.31095318847409353 No Hit CCATAGGGTCTTCTCGTCTTATTAT 896 0.30820139034600424 No Hit GTCCTACAGTGGACATTTCTAAATT 895 0.307857415579993 No Hit CTTTAGGACGTGAAATATGGCGAGG 826 0.28412315672522265 No Hit TATCAACGCAGAGTACTTTTTTTTT 776 0.2669244184246644 No Hit GTCCTACAGTGTGCATTTCTCATTT 741 0.2548853016142736 No Hit GTGTATATCAATGAGTTACAATGAG 733 0.25213350348618424 No Hit CTGTAGGACCTGGAATATGGCGAGA 707 0.24319015956989395 No Hit GTTCTACAAATCCCGTTTCCAACGA 669 0.23011911846146965 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 621 0.21360832969293375 No Hit GTTCTACAGTGTGGTTTTTATCATT 591 0.20328908671259877 No Hit GATATACACTGTTCTACAATGCCGG 588 0.20225716241456526 No Hit GTATTAGAGGCACTGCCTGCCCAGT 568 0.19537766709434196 No Hit GGTATCAACGCAGAGTACTTTTTTT 505 0.17370725683563853 No Hit GTCAGGATACCGCGGCCGTTAAACT 465 0.15994826619519192 No Hit ACCTATAACTTCTCTGTTAACCCAA 463 0.1592603166631696 No Hit CTGTAGAACATATTAGATGAGTGAG 451 0.15513261947103563 No Hit ATAAATAATCCACCTATAACTTCTC 429 0.14756517461878996 No Hit CTCTAATACTTGTAATGCTAGAGGT 425 0.14618927555474528 No Hit CCTATAACTTCTCTGTTAACCCAAC 417 0.14343747742665597 No Hit CCATTGGGATGTCCTGATCCAACAT 409 0.14068567929856668 No Hit GTTCATGCTAGTCCCTAATTAAGGA 409 0.14068567929856668 No Hit GTTATATAATTTAAGCTCCATAGGG 405 0.139309780234522 No Hit CTGTTAGTATGAGTAACAAGAATTC 401 0.13793388117047733 No Hit CTTCTACACCATTGGGATGTCCTGA 398 0.13690195687244383 No Hit GGTCAGGATACCGCGGCCGTTAAAC 397 0.1365579821064327 No Hit GACTATAGGCAATAATCACACTATA 393 0.13518208304238802 No Hit CACTATAAATAATCCACCTATAACT 390 0.13415015874435451 No Hit GCCTAAAGGAAAGATCCAAAAAGAT 381 0.13105438585025403 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 379 0.1303664363182317 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 376 0.12933451202019822 No Hit ATCCTGACCGTGCAAAGGTAGCATA 368 0.12658271389210887 No Hit GTATCAACGCAGAGTACATGGGAGA 365 0.12555078959407537 No Hit GTACATGGGAGAAATCGTAAATAGA 363 0.12486284006205306 No Hit ATGTTCTACAGTGTGGTTTTTATCA 360 0.12383091576401956 No Hit CCTCTAGCATTACAAGTATTAGAGG 353 0.1214230924019414 No Hit CTGTTAACCCAACACCGGAATGCCT 352 0.12107911763593023 No Hit GTAGAACAGTGTATATCAATGAGTT 352 0.12107911763593023 No Hit GATTAAACCTTGTACCTTTTGCATA 352 0.12107911763593023 No Hit ATCTATAACTTTATAGATGCAACAC 340 0.11695142044379624 No Hit GATTAAAGATAAGAGACAGTTGGAC 334 0.11488757184772926 No Hit CTGAAGGACCTGGAATATGGCGAGA 331 0.11385564754969575 No Hit ATTTAGAAATGTCCACTGTAGGACG 327 0.1124797484856511 No Hit ATCGTAAATAGATAGAAACCGACCT 322 0.11075987465559527 No Hit TTGATATACACTGTTCTACAAATCC 321 0.11041589988958411 No Hit GTTATAGATTAACCCAATTTTAAGT 319 0.10972795035756176 No Hit CTATAGAACTAGTACCGCAAGGGAA 316 0.10869602605952826 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 315 0.1083520512935171 No Hit CATTTACACCTACTACCCAACTATC 315 0.1083520512935171 No Hit GTAGAACATATTAGATGAGTGAGTT 311 0.10697615222947245 No Hit GTATCCTGACCGTGCAAAGGTAGCA 307 0.10560025316542777 No Hit GAATATGGCAAGAAAACTGAAAATC 301 0.1035364045693608 No Hit CTGTAGGACATGGAATATGGCAAGA 299 0.10284845503733846 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.439747660111654E-4 0.0 2 0.0 0.0 0.0 3.439747660111654E-4 0.0 3 0.0 0.0 0.0 3.439747660111654E-4 0.0 4 0.0 0.0 0.0 3.439747660111654E-4 0.0 5 0.0 0.0 0.0 3.439747660111654E-4 0.0 6 0.0 0.0 0.0 3.439747660111654E-4 0.0 7 0.0 0.0 0.0 6.879495320223308E-4 0.0 8 0.0 0.0 0.0 6.879495320223308E-4 0.0 9 0.0 0.0 0.0 0.0010319242980334964 0.0 10 0.0 0.0 0.0 0.0010319242980334964 0.0 11 0.0 0.0 0.0 0.0010319242980334964 0.0 12 0.0 0.0 0.0 0.0010319242980334964 0.0 13 0.0 0.0 0.0 0.0010319242980334964 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTTGA 30 7.6964364E-4 19.002068 12 GCTAATG 30 7.73219E-4 18.988983 1 AGGGGTC 45 3.5196288E-5 16.890726 5 CCAATTT 90 7.2759576E-12 16.887817 14 TAGAAAT 100 1.8189894E-12 16.146194 4 CCAACGA 65 1.9026993E-7 16.073135 19 TTTAGAA 95 1.8189894E-11 15.987969 2 ATTTAGA 90 1.3460522E-10 15.824152 1 ACCCAAT 85 1.0040822E-9 15.648762 12 CCCAATT 85 1.0077201E-9 15.646066 13 TAGATAG 55 1.1172013E-5 15.552505 9 TCCAACG 95 3.0195224E-10 14.996466 18 GAAGATA 45 6.742169E-4 14.77684 16 AGATAAT 45 6.7509833E-4 14.774296 18 ATAGATT 90 2.2664608E-9 14.774296 4 TCTTAAA 45 6.777485E-4 14.766666 2 TATAGGG 45 6.777485E-4 14.766666 2 TTGTAGA 220 0.0 14.6733055 1 AGATAGA 65 3.3336219E-6 14.622013 10 TAGGACC 320 0.0 14.543447 4 >>END_MODULE