##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062024_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 290719 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18241669791104 32.0 32.0 32.0 32.0 32.0 2 31.49967838359378 32.0 32.0 32.0 32.0 32.0 3 31.619433198380566 32.0 32.0 32.0 32.0 32.0 4 31.6974982715268 32.0 32.0 32.0 32.0 32.0 5 31.68553138941727 32.0 32.0 32.0 32.0 32.0 6 35.31891620430725 36.0 36.0 36.0 36.0 36.0 7 35.3279317829244 36.0 36.0 36.0 36.0 36.0 8 35.29160804763362 36.0 36.0 36.0 36.0 36.0 9 35.34476246822533 36.0 36.0 36.0 36.0 36.0 10 35.26352250798882 36.0 36.0 36.0 36.0 36.0 11 35.37251091259945 36.0 36.0 36.0 36.0 36.0 12 35.29025278705554 36.0 36.0 36.0 36.0 36.0 13 35.33159511418242 36.0 36.0 36.0 36.0 36.0 14 35.30430759599476 36.0 36.0 36.0 36.0 36.0 15 35.292457665305676 36.0 36.0 36.0 36.0 36.0 16 35.31335069259319 36.0 36.0 36.0 36.0 36.0 17 35.30127373855854 36.0 36.0 36.0 36.0 36.0 18 35.300651144232056 36.0 36.0 36.0 36.0 36.0 19 35.23704333050127 36.0 36.0 36.0 36.0 36.0 20 35.20907818202457 36.0 36.0 36.0 36.0 36.0 21 35.177817755289475 36.0 36.0 36.0 36.0 36.0 22 35.158500132430284 36.0 36.0 36.0 36.0 36.0 23 35.14883788125303 36.0 36.0 36.0 36.0 36.0 24 35.13420863445457 36.0 36.0 36.0 36.0 36.0 25 35.10422779384904 36.0 36.0 36.0 36.0 36.0 26 35.08990468459234 36.0 36.0 36.0 36.0 36.0 27 35.061217189107005 36.0 36.0 36.0 36.0 36.0 28 35.011536913652016 36.0 36.0 36.0 36.0 36.0 29 34.953119679140336 36.0 36.0 36.0 36.0 36.0 30 34.902218293266 36.0 36.0 36.0 36.0 36.0 31 34.925044458738505 36.0 36.0 36.0 36.0 36.0 32 34.87337256938831 36.0 36.0 36.0 36.0 36.0 33 34.85800377684293 36.0 36.0 36.0 36.0 36.0 34 34.83912300193658 36.0 36.0 36.0 36.0 36.0 35 34.81992233049783 36.0 36.0 36.0 36.0 36.0 36 34.75946876537137 36.0 36.0 36.0 32.0 36.0 37 34.690206006487365 36.0 36.0 36.0 32.0 36.0 38 34.6395316439586 36.0 36.0 36.0 32.0 36.0 39 34.5163370815117 36.0 36.0 36.0 32.0 36.0 40 34.573134194875465 36.0 36.0 36.0 32.0 36.0 41 34.5588764408243 36.0 36.0 36.0 32.0 36.0 42 34.50139137792851 36.0 36.0 36.0 32.0 36.0 43 34.53998190692731 36.0 36.0 36.0 32.0 36.0 44 34.42980334962627 36.0 36.0 36.0 32.0 36.0 45 34.36075385509719 36.0 36.0 36.0 32.0 36.0 46 34.22687887616564 36.0 36.0 36.0 32.0 36.0 47 34.203492031824545 36.0 36.0 36.0 32.0 36.0 48 34.100825883413194 36.0 36.0 36.0 32.0 36.0 49 34.07726017219377 36.0 36.0 36.0 32.0 36.0 50 33.69212194593405 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 6.0 22 7.0 23 36.0 24 124.0 25 311.0 26 708.0 27 1468.0 28 2631.0 29 4347.0 30 6487.0 31 9062.0 32 13320.0 33 21910.0 34 47520.0 35 182777.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.376516129032254 22.58374193548387 13.888344086021506 24.151397849462366 2 12.149137290514323 22.9185585734335 44.353174275571696 20.579129860480474 3 17.70478608135719 27.518763888028946 31.987699420056547 22.788750610557308 4 9.581761082007025 19.70184267282152 42.5231924985983 28.193203746573154 5 9.662939126785659 41.782958802142275 37.39865643456396 11.155445636508105 6 26.911553768415548 43.19084751942597 19.040379197782052 10.857219514376425 7 24.6334088931236 34.15497439107867 22.684447868904336 18.527168846893392 8 22.321210515996544 41.01623904870338 20.650181102714306 16.01236933258576 9 24.936450661979435 15.824903085109677 22.143031587202763 37.09561466570812 10 14.068223955090655 29.578734104066122 35.53087345512333 20.82216848571989 11 32.33775570224168 23.46699046157974 27.854732576818165 16.340521259360415 12 21.806968240809855 27.54928298460025 33.7060873214341 16.937661453155798 13 27.38348714738287 23.053532792834318 28.720173088102257 20.84280697168056 14 18.736993454160203 26.14208221684857 28.8570750449747 26.263849284016526 15 21.73679738854358 34.75589830730018 24.46589318207616 19.041411122080085 16 19.847204832207378 29.140810963276877 31.414507629439044 19.59747657507671 17 17.55819193103994 30.820139034600423 30.29144981924126 21.33021921511838 18 17.327728837812458 30.096760101678942 34.430154203887604 18.145356856621 19 22.18362060959208 27.715766771349653 28.728084507720514 21.37252811133775 20 20.639244903996314 31.130511354646085 30.206591955090502 18.023651786267102 21 21.71443902875285 27.616014089206413 28.152614724183834 22.5169321578569 22 20.804625772653317 30.897189382186923 29.154269242808343 19.14391560235141 23 21.098724197592862 30.392578400448546 29.209305205370136 19.299392196588457 24 21.900218083752414 29.87369029355311 29.73025034914039 18.495841273554078 25 21.04665721872893 29.94124850369433 31.11077477675807 17.90131950081867 26 16.904756171809698 31.23931521032482 33.58695913895644 18.268969478909042 27 18.23869949125782 30.993027583526246 31.34560414423649 19.42266878097944 28 18.242139262581823 30.9235442027814 30.288906393502963 20.545410141133818 29 19.22447182493 28.282046519307368 29.259626166938407 23.233855488824222 30 19.009486856678983 29.890822033723403 30.40162631828783 20.698064791309793 31 21.41552495708915 28.093107089663903 30.38088325840416 20.110484694842786 32 18.487675341740108 31.379893917817263 30.4384317448524 19.693998995590228 33 19.561156993522953 30.722106226287238 30.918515817679616 18.79822096251019 34 19.256938042625794 30.571760756201925 32.42477194237675 17.746529258795526 35 19.060673708976708 31.714817400995464 30.500930451742057 18.723578438285767 36 17.67314029403064 30.845699268707133 31.087514360995876 20.393646076266347 37 19.605381289321695 29.788690486428106 28.766369349629013 21.839558874621186 38 20.052352959386898 31.45374055359299 29.259869495973774 19.234036991046334 39 20.497597319730186 29.371519381391526 29.3343698510923 20.79651344778599 40 22.16030655136593 29.93072324383079 30.271259433540408 17.637710771262874 41 20.955791298604804 27.94380692919453 32.787432235339445 18.312969536861225 42 20.191881004881303 32.43126098637432 29.26856116766024 18.108296841084137 43 17.7233652447016 31.947258523362493 31.268554287738947 19.06082194419696 44 17.85211812662321 31.77310331779639 30.037323059458902 20.3374554961215 45 18.184382427909505 31.8285169807816 30.68889722095139 19.298203370357502 46 19.99112514576432 28.891090403117897 28.829516802025395 22.28826764909239 47 21.4013724782003 30.70808179832482 28.33152744096452 19.559018282510362 48 19.20414986859667 30.627296118441873 27.8685141103788 22.30003990258266 49 20.233504528708192 29.944513434766307 30.071103986570392 19.75087804995511 50 18.843949723783513 31.571922920808763 27.959437797973262 21.624689557434454 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 381.0 1 202.5 2 24.0 3 71.5 4 119.0 5 113.5 6 108.0 7 73.0 8 38.0 9 83.5 10 129.0 11 189.0 12 249.0 13 511.5 14 774.0 15 987.0 16 1200.0 17 1498.0 18 1796.0 19 1802.0 20 1808.0 21 2181.0 22 2554.0 23 2732.0 24 2910.0 25 4438.0 26 5966.0 27 8977.5 28 11989.0 29 13616.5 30 15244.0 31 15693.5 32 16143.0 33 19308.5 34 22474.0 35 25562.0 36 28650.0 37 30243.5 38 31837.0 39 29813.0 40 27789.0 41 25885.0 42 23981.0 43 19743.5 44 15506.0 45 14605.0 46 13704.0 47 12739.5 48 11775.0 49 10700.5 50 9626.0 51 9332.0 52 9038.0 53 8419.0 54 7800.0 55 7164.5 56 6529.0 57 6246.0 58 5963.0 59 5210.0 60 4457.0 61 3810.0 62 3163.0 63 2749.5 64 2336.0 65 2042.5 66 1749.0 67 1510.0 68 1271.0 69 1080.5 70 890.0 71 614.5 72 339.0 73 263.0 74 187.0 75 144.5 76 102.0 77 87.0 78 72.0 79 47.5 80 23.0 81 15.5 82 8.0 83 8.5 84 9.0 85 6.5 86 4.0 87 2.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032333628005049554 2 0.002407823362078158 3 3.439747660111654E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0010319242980334964 17 0.0 18 0.0 19 0.0 20 3.439747660111654E-4 21 0.0 22 0.0 23 0.0 24 0.001719873830055827 25 0.0010319242980334964 26 6.879495320223308E-4 27 6.879495320223308E-4 28 6.879495320223308E-4 29 3.439747660111654E-4 30 3.439747660111654E-4 31 0.0 32 3.439747660111654E-4 33 0.0 34 0.0010319242980334964 35 0.0 36 3.439747660111654E-4 37 0.002751798128089323 38 0.0 39 6.879495320223308E-4 40 3.439747660111654E-4 41 0.002407823362078158 42 0.006191545788200978 43 0.006191545788200978 44 0.004815646724156316 45 0.002751798128089323 46 0.003439747660111654 47 0.0013758990640446616 48 0.0037837224261228195 49 0.006191545788200978 50 0.001719873830055827 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 290719.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.699147934830194 #Duplication Level Percentage of deduplicated Percentage of total 1 66.73511680406837 23.823868072366096 2 15.814104070177015 11.291000813160991 3 6.225004778560113 6.6668209945452706 4 3.109468142564668 4.4402145288023105 5 1.7354050297127297 3.097624044128157 6 1.1349624416139776 2.431031526219208 7 0.7759205555884277 1.9389791889738839 8 0.5714682198745521 1.6320742817084561 9 0.47273284560551715 1.5188543810032138 >10 2.907207243774881 20.569688766284575 >50 0.31316057441607836 7.8449219760665105 >100 0.20145998736320966 13.769735745864223 >500 0.003989306680459597 0.9751856808771069 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 897 0.3085453651120154 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 725 0.24938170535809492 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 580 0.19950536428647594 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 537 0.18471444934799583 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 460 0.1582283923651361 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 460 0.1582283923651361 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 439 0.15100492227890164 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 439 0.15100492227890164 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 438 0.15066094751289044 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 430 0.14790914938480115 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 428 0.1472211998527788 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 428 0.1472211998527788 No Hit CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCC 426 0.14653325032075648 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGGCAAACAAGAACC 422 0.1451573512567118 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 419 0.1441254269586783 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTATTATTATATTTC 401 0.13793388117047733 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATG 396 0.1362140073404215 No Hit GATTAAACCTTGTACCTTTTGCATAATGAACTAACTAGAAAACTTCTAAC 382 0.1313983606162652 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 380 0.13071041108424286 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 377 0.12967848678620936 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 375 0.12899053725418702 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 366 0.12589476436008654 No Hit CTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCCAAAAAGATAAAA 363 0.12486284006205306 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 361 0.12417489053003071 No Hit CCTCTAGCATTACAAGTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTT 342 0.11763936997581859 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 334 0.11488757184772926 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 330 0.1135116727836846 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGTAACAAGAATTCC 330 0.1135116727836846 No Hit GTTATAGATTAACCCAATTTTAAGTTTAGGAAGTTGGTGTAAATTATGGA 328 0.11282372325166225 No Hit GATTAAAGATAAGAGACAGTTGGACCCTCGTTTAGCCGTTCATGCTAGTC 328 0.11282372325166225 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 320 0.11007192512357293 No Hit GTATCAACGCAGAGTACATGGGAGAAATCGTAAATAGATAGAAACCGACC 319 0.10972795035756176 No Hit GTACATGGGAGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGG 316 0.10869602605952826 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 315 0.1083520512935171 No Hit ATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAGAT 314 0.10800807652750595 No Hit CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCA 308 0.10594422793143894 No Hit GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGT 308 0.10594422793143894 No Hit CTATAGAACTAGTACCGCAAGGGAAAGATGAAAGACTAATTAAAAGTAAG 297 0.10216050550531613 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 3.439747660111654E-4 0.0 18 0.0 0.0 0.0 3.439747660111654E-4 0.0 19 0.0 0.0 0.0 3.439747660111654E-4 0.0 20 0.0 0.0 0.0 0.0010319242980334964 0.0 21 0.0 0.0 0.0 0.0013758990640446616 0.0 22 0.0 0.0 0.0 0.0013758990640446616 0.0 23 0.0 0.0 0.0 0.001719873830055827 0.0 24 0.0 0.0 0.0 0.0030957728941004886 0.0 25 0.0 0.0 0.0 0.003439747660111654 0.0 26 0.0 0.0 0.0 0.0037837224261228195 0.0 27 0.0 0.0 0.0 0.004127697192133985 0.0 28 0.0 0.0 0.0 0.006191545788200977 0.0 29 0.0 0.0 0.0 0.008943343916290302 0.0 30 0.0 0.0 0.0 0.014102965406457783 0.0 31 0.0 0.0 0.0 0.02545413268482624 0.0 32 0.0 0.0 0.0 0.03852517379325053 0.0 33 0.0 0.0 0.0 0.045404669113473836 0.0 34 0.0 0.0 0.0 0.054691987795775304 0.0 35 0.0 0.0 0.0 0.06741905413818843 0.0 36 0.0 0.0 0.0 0.08117804477863504 0.0 37 0.0 0.0 0.0 0.10456832886739428 0.0 38 0.0 0.0 0.0 0.13758990640446617 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAT 60 2.9338844E-7 29.331612 1 TCGGGGT 30 0.0057395757 29.331612 24 ATAAGCA 30 0.0057395757 29.331612 32 GGCATAA 30 0.0057395757 29.331612 14 GTTCGTC 40 7.0216093E-4 27.498388 18 AGGGGTC 50 8.3233695E-5 26.398453 5 CCATTTA 50 8.3233695E-5 26.398453 10 GCGTTTA 70 1.1279026E-6 25.141384 35 TGTAGGA 635 0.0 24.94342 2 CTGTAGG 650 0.0 24.706245 1 ATGTTCG 45 0.0013961403 24.44301 16 TAGGACC 290 0.0 24.274439 4 AGGACCT 365 0.0 24.108175 5 GGGCGTT 55 1.5901947E-4 23.998592 33 GTGTAAG 55 1.5901947E-4 23.998592 1 GGACCTG 365 0.0 23.505472 6 GTATAGG 85 2.3412395E-7 23.292751 1 CTAGGAC 145 0.0 22.757286 3 GAACTGG 50 0.0025766462 21.99871 7 ACTCTTA 50 0.0025766462 21.99871 19 >>END_MODULE