##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062020_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 243266 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10934121496633 32.0 32.0 32.0 32.0 32.0 2 31.45363511547031 32.0 32.0 32.0 32.0 32.0 3 31.605033173563097 32.0 32.0 32.0 32.0 32.0 4 31.717695855565513 32.0 32.0 32.0 32.0 32.0 5 31.705486997771985 32.0 32.0 32.0 32.0 32.0 6 35.36698922167504 36.0 36.0 36.0 36.0 36.0 7 35.37038468178866 36.0 36.0 36.0 36.0 36.0 8 35.33066684205767 36.0 36.0 36.0 36.0 36.0 9 35.373858245706344 36.0 36.0 36.0 36.0 36.0 10 35.287438441870215 36.0 36.0 36.0 36.0 36.0 11 35.39539845272253 36.0 36.0 36.0 36.0 36.0 12 35.32947473136402 36.0 36.0 36.0 36.0 36.0 13 35.34958029482131 36.0 36.0 36.0 36.0 36.0 14 35.31586822655036 36.0 36.0 36.0 36.0 36.0 15 35.30981312637196 36.0 36.0 36.0 36.0 36.0 16 35.30654509878076 36.0 36.0 36.0 36.0 36.0 17 35.30975146547401 36.0 36.0 36.0 36.0 36.0 18 35.316188863219686 36.0 36.0 36.0 36.0 36.0 19 35.242080685340326 36.0 36.0 36.0 36.0 36.0 20 35.19250943411738 36.0 36.0 36.0 36.0 36.0 21 35.15240107536606 36.0 36.0 36.0 36.0 36.0 22 35.140340203727604 36.0 36.0 36.0 36.0 36.0 23 35.14154875732737 36.0 36.0 36.0 36.0 36.0 24 35.121422640237434 36.0 36.0 36.0 36.0 36.0 25 35.07024820566787 36.0 36.0 36.0 36.0 36.0 26 35.04963291212089 36.0 36.0 36.0 36.0 36.0 27 35.03653202667039 36.0 36.0 36.0 36.0 36.0 28 34.967171737932965 36.0 36.0 36.0 36.0 36.0 29 34.927544334185626 36.0 36.0 36.0 36.0 36.0 30 34.856609637187276 36.0 36.0 36.0 36.0 36.0 31 34.88030797563162 36.0 36.0 36.0 36.0 36.0 32 34.81982274547204 36.0 36.0 36.0 36.0 36.0 33 34.790722912367535 36.0 36.0 36.0 32.0 36.0 34 34.75310565389327 36.0 36.0 36.0 32.0 36.0 35 34.71706691440645 36.0 36.0 36.0 32.0 36.0 36 34.646678944036566 36.0 36.0 36.0 32.0 36.0 37 34.60655825310565 36.0 36.0 36.0 32.0 36.0 38 34.55399439296902 36.0 36.0 36.0 32.0 36.0 39 34.33927881413761 36.0 36.0 36.0 32.0 36.0 40 34.42586304703493 36.0 36.0 36.0 32.0 36.0 41 34.39495449425731 36.0 36.0 36.0 32.0 36.0 42 34.37625068854669 36.0 36.0 36.0 32.0 36.0 43 34.38153708286403 36.0 36.0 36.0 32.0 36.0 44 34.21824669292051 36.0 36.0 36.0 32.0 36.0 45 34.16986755239121 36.0 36.0 36.0 32.0 36.0 46 33.969227101197866 36.0 36.0 36.0 32.0 36.0 47 33.95206481793592 36.0 36.0 36.0 32.0 36.0 48 33.890975310976465 36.0 36.0 36.0 32.0 36.0 49 33.75296588919126 36.0 36.0 36.0 32.0 36.0 50 33.43467644471484 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 2.0 21 3.0 22 11.0 23 43.0 24 96.0 25 273.0 26 694.0 27 1465.0 28 2632.0 29 3909.0 30 5770.0 31 8313.0 32 11877.0 33 18743.0 34 40200.0 35 149231.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.161763617373 21.537778289511557 13.282644274658487 24.01781381845696 2 11.961325171936085 22.3354531589787 45.5045856473964 20.198636021688817 3 18.839614575111813 27.75009865824783 31.00129900026309 22.40898776637727 4 10.133351968626936 18.259847245402153 40.828146966694895 30.77865381927602 5 10.489751958761191 40.46886946798977 36.448989994491626 12.59238857875741 6 28.06146358307367 41.559445216347534 18.4440077939375 11.93508340664129 7 24.286994483404996 33.16246413391103 23.086662336701387 19.463879045982587 8 22.20820007728166 41.520804386967356 20.502248567411804 15.768746968339183 9 25.39236884727007 14.715989904055643 21.2984962962354 38.5931449524389 10 14.831090246890236 29.394983269343022 34.248107010433024 21.52581947333372 11 33.61258868892488 23.03404503711986 26.480478159709946 16.872888114245313 12 22.751638124522128 25.76356745291163 34.550656483026806 16.934137939539433 13 29.13682964327115 23.204640188106847 27.620382626425393 20.038147542196608 14 19.304382856626077 24.145585490779638 28.638198515205577 27.911833137388705 15 21.96361184875815 34.43884472141606 23.957725288367467 19.63981814145832 16 19.7679867796861 28.683065994688857 31.50553723968396 20.043409985941086 17 17.59555383818536 29.94088775250138 30.912252431494743 21.55130597781852 18 17.603364218591995 29.314824102011787 35.164387953926976 17.917423725469238 19 22.99211562651583 25.299466427696434 28.661629656425475 23.04678828936226 20 22.63704190902925 29.099541652107785 29.844408361252135 18.419008077610837 21 22.532947473136403 26.80358126495277 27.83044075209853 22.833030509812303 22 21.37125615581298 30.344150025075432 29.441434479129843 18.84315933998175 23 20.84590530530366 30.02433550105646 29.65149260480297 19.478266588836913 24 22.75707561712536 27.80753499270343 30.44909871950342 18.986290670667792 25 21.977588318959494 28.619289173168465 30.60600330502413 18.797119202847913 26 17.89331754801368 30.715190081557488 32.71384175217048 18.677650618258355 27 18.26485519906275 29.72067498407087 32.43006597743202 19.584403839434362 28 18.29385600710345 30.955924065410954 29.69719890488445 21.053021022601147 29 19.25693590887229 26.993418645663336 29.369858959233426 24.37978648623095 30 19.2791341058854 29.04634079165348 29.749283697068606 21.92524140539252 31 22.290278422941427 27.652787312497175 29.77353728269404 20.28339698186736 32 18.80089614206729 30.359484512774138 30.8375639734446 20.002055371713976 33 19.35782230151357 30.43869673526099 31.554347915450577 18.649133047774864 34 19.71101473701519 29.335087250529256 32.17766633095595 18.7762316814996 35 19.16428586109798 30.86305058269788 30.61023986187902 19.362423694325116 36 18.483470768623647 30.5854496723751 30.873200529461574 20.05787902953968 37 19.09199659622049 29.62315885537637 29.186587135522224 22.09825741288092 38 20.35097383111491 31.87827316599936 28.85524487597938 18.91550812690635 39 21.04445339669333 27.466230381557637 30.01446975738492 21.474846464364113 40 23.319740530941438 28.541596441755118 30.058043458600874 18.080619568702573 41 22.070442568095306 27.101643495490457 32.288643520155226 18.53927041625901 42 19.96957924811412 32.024418819757045 29.95128568785842 18.054716244270416 43 18.045409511907355 31.775558780364477 31.36158649636387 18.8174452113643 44 17.89985159850201 31.012213319959386 30.072885278653615 21.01504980288499 45 18.789670141743677 31.008895977899826 30.01981451639425 20.181619363962245 46 20.168053408754563 28.761469398493766 28.266106488637483 22.804370704114184 47 21.71115916172686 30.122666096636546 28.546176550386004 19.619998191250584 48 18.97959351465123 30.059690202913803 28.26651757818923 22.694198704245732 49 21.093827079290953 29.02210017430197 29.37070411418423 20.513368632222846 50 19.75376646866586 31.438965736953527 27.071300844757772 21.73596694962284 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 595.0 1 317.0 2 39.0 3 119.5 4 200.0 5 186.0 6 172.0 7 116.0 8 60.0 9 103.0 10 146.0 11 252.0 12 358.0 13 659.5 14 961.0 15 1230.0 16 1499.0 17 1586.0 18 1673.0 19 1708.5 20 1744.0 21 1909.5 22 2075.0 23 2149.0 24 2223.0 25 2996.0 26 3769.0 27 5830.5 28 7892.0 29 9277.5 30 10663.0 31 12072.5 32 13482.0 33 15923.0 34 18364.0 35 21113.5 36 23863.0 37 23902.0 38 23941.0 39 22280.5 40 20620.0 41 19003.5 42 17387.0 43 15020.0 44 12653.0 45 12151.5 46 11650.0 47 10984.5 48 10319.0 49 9738.0 50 9157.0 51 9143.0 52 9129.0 53 8639.0 54 8149.0 55 7875.5 56 7602.0 57 6985.5 58 6369.0 59 5749.5 60 5130.0 61 4437.0 62 3744.0 63 3170.0 64 2596.0 65 2213.5 66 1831.0 67 1511.5 68 1192.0 69 999.0 70 806.0 71 687.5 72 569.0 73 450.0 74 331.0 75 249.5 76 168.0 77 128.5 78 89.0 79 65.5 80 42.0 81 25.5 82 9.0 83 6.0 84 3.0 85 1.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034530102850377775 2 0.0028775085708648146 3 8.221453059613756E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0016442906119227513 17 0.0 18 0.0 19 0.0 20 4.110726529806878E-4 21 0.0 22 0.0 23 0.0 24 4.110726529806878E-4 25 0.0 26 8.221453059613756E-4 27 4.110726529806878E-4 28 0.0016442906119227513 29 0.0012332179589420633 30 0.0012332179589420633 31 0.0012332179589420633 32 4.110726529806878E-4 33 0.0 34 4.110726529806878E-4 35 4.110726529806878E-4 36 0.0 37 0.0028775085708648146 38 0.0 39 0.0 40 0.0 41 0.0016442906119227513 42 0.004521799182787566 43 0.005343944488748941 44 0.0028775085708648146 45 0.004110726529806878 46 0.004110726529806878 47 0.0016442906119227513 48 0.004110726529806878 49 0.004110726529806878 50 4.110726529806878E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 243266.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.269225372060774 #Duplication Level Percentage of deduplicated Percentage of total 1 64.85925506997533 28.064097250867377 2 17.06859178917693 14.770894898192052 3 7.08348894651458 9.194912389417219 4 3.4034975505663754 5.890668102748532 5 1.9935122767611775 4.312886599257469 6 1.2771334618350334 3.315634535420414 7 0.8168808238391128 2.474206032816647 8 0.5867588520066929 2.03108808052234 9 0.43832572571699785 1.7069413151178787 >10 2.251400257235917 17.98107449602726 >50 0.1484330257180691 4.356579644500846 >100 0.07072983104686514 5.450573820590996 >500 0.001992389606953948 0.45044283452096406 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 524 0.21540207016188043 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 521 0.21416885220293833 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 427 0.1755280228227537 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 389 0.15990726200948757 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 388 0.15949618935650686 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 377 0.1549743901737193 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 331 0.13606504813660766 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 329 0.1352429028306463 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 328 0.1348318301776656 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 325 0.13359861221872354 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 311 0.1278435950769939 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 307 0.12619930446507116 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 307 0.12619930446507116 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 306 0.12578823181209048 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 260 0.10687888977497884 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 250 0.10276816324517196 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.002055363264903439 0.0 25 0.0 0.0 0.0 0.0024664359178841267 0.0 26 0.0 0.0 0.0 0.004521799182787566 0.0 27 0.0 0.0 0.0 0.006166089794710317 0.0 28 0.0 0.0 0.0 0.009043598365575133 0.0 29 0.0 0.0 0.0 0.012332179589420634 0.0 30 0.0 0.0 0.0 0.022197923260957143 0.0 31 0.0 0.0 0.0 0.038640829380184656 0.0 32 0.0 0.0 0.0 0.050150863663643915 0.0 33 0.0 0.0 0.0 0.062483043253064544 0.0 34 0.0 0.0 0.0 0.07522629549546588 0.0 35 0.0 0.0 0.0 0.08961383834978995 0.0 36 0.0 0.0 0.0 0.10852318038690158 0.0 37 0.0 0.0 0.0 0.13359861221872354 0.0 38 0.0 0.0 0.0 0.17018407833400476 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGAGC 30 1.2981165E-4 36.666496 28 CTTCCGC 25 0.0023467974 35.207073 1 GTCTTAC 25 0.0023467974 35.207073 1 GATCGAT 25 0.0023491662 35.199837 19 AGCCTAT 25 0.0023491662 35.199837 6 GGACCGT 25 0.0023491662 35.199837 6 GAGCATA 35 3.2104563E-4 31.428425 31 GACCTAG 35 3.2104563E-4 31.428425 7 TCTGCAC 30 0.005736243 29.333199 15 GCGCGAT 30 0.005736243 29.333199 28 TAGCGGA 30 0.005736243 29.333199 6 AGAACCG 30 0.005736243 29.333199 5 TAGGACC 295 0.0 29.08461 4 CGGATGG 40 7.0160767E-4 27.499872 14 AGCATAG 40 7.0160767E-4 27.499872 32 TGCTACA 40 7.0160767E-4 27.499872 2 AGGACCT 440 0.0 25.99988 5 GGACCTG 395 0.0 25.063175 6 CTAGAAC 45 0.0013950476 24.444328 10 TCGGATG 45 0.0013950476 24.444328 13 >>END_MODULE