##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062019_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2151782 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28892285556808 32.0 32.0 32.0 32.0 32.0 2 31.441763617318113 32.0 32.0 32.0 32.0 32.0 3 31.565564727281853 32.0 32.0 32.0 32.0 32.0 4 31.64302657053549 32.0 32.0 32.0 32.0 32.0 5 31.61734599508686 32.0 32.0 32.0 32.0 32.0 6 35.25781793880607 36.0 36.0 36.0 36.0 36.0 7 35.26764653668448 36.0 36.0 36.0 36.0 36.0 8 35.21892459366237 36.0 36.0 36.0 36.0 36.0 9 35.29985472506044 36.0 36.0 36.0 36.0 36.0 10 35.18091609651907 36.0 36.0 36.0 36.0 36.0 11 35.30259013227176 36.0 36.0 36.0 36.0 36.0 12 35.2282271159439 36.0 36.0 36.0 36.0 36.0 13 35.2672468679448 36.0 36.0 36.0 36.0 36.0 14 35.22828985464141 36.0 36.0 36.0 36.0 36.0 15 35.19879569584651 36.0 36.0 36.0 36.0 36.0 16 35.21584760909795 36.0 36.0 36.0 36.0 36.0 17 35.19547240380299 36.0 36.0 36.0 36.0 36.0 18 35.190075016892976 36.0 36.0 36.0 36.0 36.0 19 35.180588925829845 36.0 36.0 36.0 36.0 36.0 20 35.18335639948656 36.0 36.0 36.0 36.0 36.0 21 35.17486715661717 36.0 36.0 36.0 36.0 36.0 22 35.164996732940416 36.0 36.0 36.0 36.0 36.0 23 35.12910043861321 36.0 36.0 36.0 36.0 36.0 24 35.11418396473249 36.0 36.0 36.0 36.0 36.0 25 35.103549987870515 36.0 36.0 36.0 36.0 36.0 26 35.05564132426054 36.0 36.0 36.0 36.0 36.0 27 35.04304571745651 36.0 36.0 36.0 36.0 36.0 28 35.02167552289219 36.0 36.0 36.0 36.0 36.0 29 35.0069658543477 36.0 36.0 36.0 36.0 36.0 30 34.98532565101855 36.0 36.0 36.0 36.0 36.0 31 34.99336410472808 36.0 36.0 36.0 36.0 36.0 32 34.962592400159494 36.0 36.0 36.0 36.0 36.0 33 34.94501534077337 36.0 36.0 36.0 36.0 36.0 34 34.93575882687001 36.0 36.0 36.0 36.0 36.0 35 34.924088499671434 36.0 36.0 36.0 36.0 36.0 36 34.8955953716501 36.0 36.0 36.0 32.0 36.0 37 34.89148575459782 36.0 36.0 36.0 32.0 36.0 38 34.87814797223882 36.0 36.0 36.0 32.0 36.0 39 34.856822391859396 36.0 36.0 36.0 32.0 36.0 40 34.84807104065375 36.0 36.0 36.0 32.0 36.0 41 34.81976055195182 36.0 36.0 36.0 32.0 36.0 42 34.79693296068096 36.0 36.0 36.0 32.0 36.0 43 34.78940524644225 36.0 36.0 36.0 32.0 36.0 44 34.7505026066767 36.0 36.0 36.0 32.0 36.0 45 34.734838845199 36.0 36.0 36.0 32.0 36.0 46 34.72296961309278 36.0 36.0 36.0 32.0 36.0 47 34.697205850778566 36.0 36.0 36.0 32.0 36.0 48 34.67561119109649 36.0 36.0 36.0 32.0 36.0 49 34.658549518492116 36.0 36.0 36.0 32.0 36.0 50 34.24597752002759 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 26.0 21 56.0 22 151.0 23 431.0 24 996.0 25 2361.0 26 4976.0 27 9476.0 28 16458.0 29 26183.0 30 38834.0 31 58120.0 32 88967.0 33 152423.0 34 350069.0 35 1402250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.451159277122436 17.237631471904237 12.18339241094776 26.12781684002557 2 16.252664199754797 19.139109104615095 37.04536645353069 27.562860242099426 3 19.197110109458368 22.379688973346216 27.84428869720236 30.57891221999306 4 13.026796419708333 15.481368913178855 34.32479156791122 37.16704309920159 5 15.236355372596003 35.92275422080593 32.76388256983401 16.077007836764057 6 36.30902615928495 33.98978240795174 15.793025213091122 13.908166219672188 7 31.589910130301302 29.647241216814713 19.25371622218236 19.509132430701623 8 28.618094212146026 33.3396226941205 18.15183880151428 19.890444292219193 9 27.033268239998286 14.539298125925395 17.956372903946587 40.47106073012973 10 16.372391056524805 26.896975110385302 30.69977846258518 26.030855370504714 11 37.85188276507564 21.123143515467646 21.305968727315314 19.719004992141397 12 24.947136838211307 23.024451361708575 28.1845930489241 23.843818751156018 13 29.854650703463452 19.311528770107753 24.669413537244942 26.164406989183846 14 23.70709486369902 19.038359833849338 24.596311336371436 32.65823396608021 15 25.482925314925026 26.85109365168033 21.640993372005155 26.024987661389492 16 26.156478692647774 25.752857300202763 23.021244380786225 25.06941962636324 17 24.675873299432748 25.77775072010083 24.441555882519697 25.10482009794672 18 25.23091336897203 25.20563198578294 25.120446736912356 24.443007908332678 19 25.925070476470204 24.847173180182754 24.746419479296694 24.481336864050355 20 26.158171741933984 24.343809180792604 24.446515086382174 25.051503990891238 21 26.60701688182167 24.232148052172573 24.33652665558128 24.824308410424475 22 26.282773998481257 24.02394852266633 24.5757702220764 25.117507256776012 23 24.959835596652262 24.246891296093796 25.104924711204347 25.688348396049598 24 25.109875223015216 24.69319287150652 24.79576011997626 25.401171785502 25 25.42082620938303 24.226186797064198 24.86956141871447 25.483425574838307 26 25.091761665977312 24.95870841214442 25.036225990696032 24.913303931182238 27 25.574177933349816 24.659582892611297 24.567751601935523 25.19848757210336 28 25.393167255023343 24.61315316420635 24.81484889550674 25.17883068526357 29 25.195501570100564 24.710134386852147 24.95430512419293 25.140058918854358 30 25.214893454858434 24.778274940932185 24.930661540949657 25.076170063259724 31 25.488875690476785 24.61666513304836 24.479847790706643 25.41461138576821 32 25.47965386474328 24.642943450942482 24.288071160352455 25.58933152396178 33 25.130241130822977 24.506570845133652 24.777602522193273 25.5855855018501 34 25.604410516756932 24.654074838992717 24.927942908290213 24.81357173596014 35 25.67648707255116 24.486726790588992 25.000255602576104 24.83653053428374 36 25.113022916883544 24.787384932260608 24.778973276028733 25.320618874827122 37 25.668863486274173 24.641140431472657 24.59466656628312 25.095329515970043 38 25.258274304739047 24.609184387637782 24.76491577678408 25.36762553083909 39 25.75885377817745 24.460152479476154 24.537159029912655 25.243834712433745 40 25.983917508333793 24.505979000651088 24.495197234291037 25.01490625672408 41 25.033844403578655 24.930068841352586 25.07079092035865 24.965295834710112 42 25.894228159472938 24.754332412505903 24.57972531333539 24.77171411468577 43 25.489287540084582 24.1952409722545 24.866105869777385 25.449365617883537 44 25.089208781546073 24.671351967333646 24.730375229935113 25.509064021185168 45 25.283329104193914 24.851910409166916 24.575017962224024 25.28974252441515 46 25.262497472969486 24.636491017713613 24.665304974822643 25.43570653449426 47 25.434249172770194 24.599676543852475 24.91434918392386 25.05172509945347 48 25.692419875883783 25.005054159677986 24.201640289762526 25.10088567467571 49 25.259664964923328 24.98267660912342 24.449659922433966 25.307998503519286 50 25.480400121203783 24.969234315542526 24.403229374443473 25.147136188810215 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 31.0 2 46.0 3 129.0 4 212.0 5 228.0 6 244.0 7 203.5 8 163.0 9 214.5 10 266.0 11 502.0 12 738.0 13 1349.5 14 1961.0 15 2580.0 16 3199.0 17 3108.5 18 3018.0 19 3024.5 20 3031.0 21 3779.0 22 4527.0 23 5710.5 24 6894.0 25 8686.5 26 10479.0 27 13646.5 28 16814.0 29 20170.0 30 23526.0 31 27047.5 32 30569.0 33 35316.5 34 40064.0 35 46668.0 36 53272.0 37 61252.5 38 69233.0 39 76750.0 40 84267.0 41 92387.0 42 100507.0 43 107481.5 44 114456.0 45 124360.5 46 134265.0 47 144259.5 48 154254.0 49 163168.0 50 172082.0 51 170531.0 52 168980.0 53 168434.0 54 167888.0 55 168155.5 56 168423.0 57 163234.5 58 158046.0 59 145042.5 60 132039.0 61 116566.5 62 101094.0 63 87582.5 64 74071.0 65 62440.0 66 50809.0 67 43336.5 68 35864.0 69 30820.5 70 25777.0 71 20118.0 72 14459.0 73 12500.0 74 10541.0 75 8058.5 76 5576.0 77 4793.0 78 4010.0 79 3387.5 80 2765.0 81 2136.0 82 1507.0 83 1234.0 84 961.0 85 726.0 86 491.0 87 342.5 88 194.0 89 125.5 90 57.0 91 48.5 92 40.0 93 30.5 94 21.0 95 22.0 96 23.0 97 28.0 98 33.0 99 21.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03053283278696448 2 0.004833203363537756 3 2.3236554632393057E-4 4 9.294621852957223E-5 5 4.6473109264786116E-5 6 1.3941932779435834E-4 7 0.0 8 0.0 9 0.0 10 4.6473109264786116E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.041504204422195E-4 17 0.0 18 4.6473109264786116E-5 19 0.0 20 3.253117648535028E-4 21 0.0 22 0.0 23 4.6473109264786116E-5 24 0.0010688815130900807 25 1.3941932779435834E-4 26 5.576773111774333E-4 27 4.6473109264786114E-4 28 0.001208300840884439 29 4.1825798338307506E-4 30 8.365159667661501E-4 31 3.7178487411828893E-4 32 0.0010224084038252944 33 1.8589243705914447E-4 34 7.435697482365779E-4 35 1.8589243705914447E-4 36 2.7883865558871667E-4 37 0.0016265588242675142 38 0.0 39 7.90042857501364E-4 40 4.6473109264786116E-5 41 0.0010688815130900807 42 0.004368472270889895 43 0.003810794959712461 44 0.004089633615301178 45 0.002044816807650589 46 0.0021842361354449473 47 0.0010224084038252944 48 0.004136106724565964 49 0.00311369832074067 50 0.001580085715002728 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2151782.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.91456039505208 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43417522379417 39.591712751640884 2 15.045705793922126 16.22365227425199 3 5.113163925936283 8.2702195588408 4 2.303639773006867 4.967989026808913 5 1.1616160433989273 3.1314009163846452 6 0.7042133842270308 2.2780413020947363 7 0.4483299701699795 1.6920059277548885 8 0.311829574627731 1.344972354738416 9 0.22768559497499474 1.104801188522645 >10 1.119138931833328 10.803346551161393 >50 0.07438486453454381 2.789968047967099 >100 0.05038635620463423 5.281518927883199 >500 0.0043413358859835235 1.5654014114045858 >1k 0.001389227483514678 0.9549697605458337 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3941932779435836E-4 2 0.0 0.0 0.0 0.0 1.3941932779435836E-4 3 0.0 0.0 0.0 0.0 1.3941932779435836E-4 4 0.0 0.0 0.0 0.0 1.3941932779435836E-4 5 0.0 4.6473109264786116E-5 0.0 0.0 1.3941932779435836E-4 6 0.0 4.6473109264786116E-5 0.0 0.0 2.323655463239306E-4 7 0.0 4.6473109264786116E-5 0.0 4.6473109264786116E-5 2.323655463239306E-4 8 0.0 4.6473109264786116E-5 0.0 4.6473109264786116E-5 2.323655463239306E-4 9 0.0 4.6473109264786116E-5 0.0 4.6473109264786116E-5 2.323655463239306E-4 10 0.0 4.6473109264786116E-5 0.0 4.6473109264786116E-5 2.323655463239306E-4 11 0.0 4.6473109264786116E-5 0.0 4.6473109264786116E-5 2.788386555887167E-4 12 0.0 4.6473109264786116E-5 0.0 9.294621852957223E-5 6.506235297070056E-4 13 0.0 4.6473109264786116E-5 0.0 9.294621852957223E-5 6.970966389717917E-4 14 0.0 4.6473109264786116E-5 0.0 9.294621852957223E-5 7.435697482365779E-4 15 0.0 4.6473109264786116E-5 0.0 1.3941932779435836E-4 0.0010688815130900807 16 0.0 4.6473109264786116E-5 0.0 1.8589243705914447E-4 0.0010688815130900807 17 0.0 4.6473109264786116E-5 0.0 2.788386555887167E-4 0.0010688815130900807 18 0.0 4.6473109264786116E-5 0.0 3.253117648535028E-4 0.001161827731619653 19 0.0 4.6473109264786116E-5 0.0 3.7178487411828893E-4 0.001161827731619653 20 0.0 9.294621852957223E-5 0.0 6.506235297070056E-4 0.0013941932779435835 21 0.0 9.294621852957223E-5 0.0 7.90042857501364E-4 0.001533612605737942 22 0.0 9.294621852957223E-5 0.0 0.0010688815130900807 0.001533612605737942 23 0.0 9.294621852957223E-5 0.0 0.001626558824267514 0.001580085715002728 24 0.0 9.294621852957223E-5 0.0 0.0019053974798562308 0.001626558824267514 25 0.0 9.294621852957223E-5 0.0 0.0026024941188280224 0.001626558824267514 26 0.0 9.294621852957223E-5 0.0 0.003206644539270242 0.001626558824267514 27 0.0 9.294621852957223E-5 0.0 0.0038572680689772476 0.001626558824267514 28 0.0 9.294621852957223E-5 0.0 0.004740257145008184 0.001626558824267514 29 0.0 9.294621852957223E-5 0.0 0.005762665548833479 0.001626558824267514 30 0.0 9.294621852957223E-5 0.0 0.007528643700895351 0.0016730319335323002 31 0.0 9.294621852957223E-5 0.0 0.012036535299579603 0.0017195050427970863 32 0.0 9.294621852957223E-5 0.0 0.015754384040762494 0.0018124512613266585 33 0.0 9.294621852957223E-5 0.0 0.020680533622829823 0.0019053974798562308 34 0.0 9.294621852957223E-5 0.0 0.025792575641956295 0.0021842361354449473 35 0.0 1.3941932779435836E-4 0.0 0.030811671442553194 0.0021842361354449473 36 0.0 1.3941932779435836E-4 0.0 0.03806147648785983 0.0021842361354449473 37 0.0 1.3941932779435836E-4 0.0 0.0508880546449408 0.0021842361354449473 38 0.0 1.3941932779435836E-4 0.0 0.06692127734129201 0.00227718235397452 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2300 0.0 28.034376 1 GGTATCA 1035 0.0 21.900196 1 TCAACGC 3325 0.0 18.988913 4 ATCAACG 3340 0.0 18.903633 3 CGGATCG 210 0.0 18.856585 26 CAACGCA 3440 0.0 18.609915 5 TATCAAC 3520 0.0 18.251156 2 AACGCAG 3555 0.0 17.88414 6 ATACCGT 555 0.0 17.04454 6 CAATACG 350 0.0 16.344273 38 GTCCTAT 375 0.0 15.844686 1 ACCGTCG 445 0.0 15.8197565 8 CGCAATA 340 0.0 15.529675 36 AACGCCG 340 0.0 15.528953 5 ATACGAA 355 0.0 15.4943 40 GGCGTTA 485 0.0 15.424016 42 GATATAC 315 0.0 15.369624 1 CGTCGTA 460 0.0 15.303895 10 GTATAGC 350 0.0 15.090177 1 GATCTAA 175 6.39302E-8 15.090177 1 >>END_MODULE