SRR4062018_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062018_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	151040
Sequences flagged as poor quality	0
Sequence length	50
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	472	0.3125	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	289	0.19134004237288135	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	203	0.13440148305084745	No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA	176	0.11652542372881357	No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA	173	0.11453919491525423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATATCT	25	4.4277782E-5	43.994373	4
TACCCGG	20	7.8396866E-4	43.99437	6
CGTGCAT	25	0.0023401494	35.218822	40
GCGCATC	25	0.002347772	35.1955	18
GGCGCAT	25	0.002347772	35.1955	17
TGCCAGG	40	1.8111825E-5	32.995777	26
CCATATC	40	1.8111825E-5	32.995777	3
ACCTATA	35	3.194606E-4	31.445375	1
TCGTGCA	30	0.0057143527	29.349016	39
GTTTAAT	30	0.0057236175	29.339296	2
CGTTTTT	30	0.0057328944	29.32958	30
CGGGAAA	50	8.263931E-5	26.414118	40
TCCATAT	50	8.282592E-5	26.405369	2
AGAGTTA	45	0.0013882278	24.457516	40
CCCCCGA	45	0.0013882278	24.457516	44
TTTCACG	45	0.0013936001	24.441319	25
TTCTGGT	45	0.0013936001	24.441319	37
GTCCATA	50	0.0025621185	22.011765	1
CCGTGCG	50	0.0025720007	21.997187	13
TTCGGTT	50	0.0025720007	21.997187	14