##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062018_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 151040 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07318591101695 32.0 32.0 32.0 32.0 32.0 2 31.40153601694915 32.0 32.0 32.0 32.0 32.0 3 31.539261122881356 32.0 32.0 32.0 32.0 32.0 4 31.674947033898306 32.0 32.0 32.0 32.0 32.0 5 31.62564221398305 32.0 32.0 32.0 32.0 32.0 6 35.26571769067797 36.0 36.0 36.0 36.0 36.0 7 35.27071636652543 36.0 36.0 36.0 36.0 36.0 8 35.205442266949156 36.0 36.0 36.0 36.0 36.0 9 35.26165916313559 36.0 36.0 36.0 36.0 36.0 10 35.18848649364407 36.0 36.0 36.0 36.0 36.0 11 35.28009798728814 36.0 36.0 36.0 36.0 36.0 12 35.20837526483051 36.0 36.0 36.0 36.0 36.0 13 35.2298000529661 36.0 36.0 36.0 36.0 36.0 14 35.18332891949152 36.0 36.0 36.0 36.0 36.0 15 35.1931342690678 36.0 36.0 36.0 36.0 36.0 16 35.18306408898305 36.0 36.0 36.0 36.0 36.0 17 35.17046477754237 36.0 36.0 36.0 36.0 36.0 18 35.15858712923729 36.0 36.0 36.0 36.0 36.0 19 35.11090439618644 36.0 36.0 36.0 36.0 36.0 20 35.07368246822034 36.0 36.0 36.0 36.0 36.0 21 35.05581302966102 36.0 36.0 36.0 36.0 36.0 22 35.071696239406776 36.0 36.0 36.0 36.0 36.0 23 35.05333686440678 36.0 36.0 36.0 36.0 36.0 24 35.014678230932205 36.0 36.0 36.0 36.0 36.0 25 35.00319120762712 36.0 36.0 36.0 36.0 36.0 26 34.96904131355932 36.0 36.0 36.0 36.0 36.0 27 34.98818193855932 36.0 36.0 36.0 36.0 36.0 28 34.96475105932203 36.0 36.0 36.0 36.0 36.0 29 34.94183659957627 36.0 36.0 36.0 36.0 36.0 30 34.897000794491525 36.0 36.0 36.0 32.0 36.0 31 34.87119968220339 36.0 36.0 36.0 32.0 36.0 32 34.86972987288136 36.0 36.0 36.0 32.0 36.0 33 34.77674788135593 36.0 36.0 36.0 32.0 36.0 34 34.74892743644068 36.0 36.0 36.0 32.0 36.0 35 34.73640095338983 36.0 36.0 36.0 32.0 36.0 36 34.72446371822034 36.0 36.0 36.0 32.0 36.0 37 34.71581038135593 36.0 36.0 36.0 32.0 36.0 38 34.678952595338984 36.0 36.0 36.0 32.0 36.0 39 34.608050847457626 36.0 36.0 36.0 32.0 36.0 40 34.589757680084745 36.0 36.0 36.0 32.0 36.0 41 34.50093352754237 36.0 36.0 36.0 32.0 36.0 42 34.52045153601695 36.0 36.0 36.0 32.0 36.0 43 34.41904131355932 36.0 36.0 36.0 32.0 36.0 44 34.28075344279661 36.0 36.0 36.0 32.0 36.0 45 34.21366525423729 36.0 36.0 36.0 32.0 36.0 46 34.12380826271186 36.0 36.0 36.0 32.0 36.0 47 34.06442002118644 36.0 36.0 36.0 32.0 36.0 48 34.01584348516949 36.0 36.0 36.0 32.0 36.0 49 33.87538400423729 36.0 36.0 36.0 32.0 36.0 50 33.50493908898305 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 2.0 22 19.0 23 38.0 24 105.0 25 210.0 26 488.0 27 946.0 28 1657.0 29 2429.0 30 3633.0 31 5160.0 32 7687.0 33 11919.0 34 23856.0 35 92889.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.15648655271297 20.10702199381445 13.247283058603813 23.489208394868772 2 15.792331274126163 20.179568162405896 39.353369220480836 24.67473134298711 3 18.979740466101696 25.17876059322034 28.769200211864405 27.07229872881356 4 12.854872881355933 15.681938559322035 35.32309322033898 36.14009533898305 5 14.227356991525426 37.253707627118644 31.404263771186443 17.11467161016949 6 32.50662076271186 36.037473516949156 15.989804025423728 15.466101694915254 7 28.497748940677965 32.10672669491525 19.40280720338983 19.992717161016948 8 27.676774364406782 33.373940677966104 18.307733050847457 20.64155190677966 9 26.86242055084746 14.05918961864407 20.0880561440678 38.99033368644068 10 18.626191737288135 26.192399364406782 28.013771186440678 27.167637711864405 11 36.73795021186441 23.12831038135593 19.671610169491522 20.462129237288135 12 23.96451271186441 25.432997881355934 27.766816737288135 22.835672669491526 13 29.354475635593218 21.70219809322034 25.364804025423727 23.578522245762713 14 23.146186440677965 18.856594279661017 26.293697033898304 31.70352224576271 15 26.857786016949152 25.825609110169488 22.976694915254235 24.339909957627118 16 24.636520127118644 27.650291313559322 23.207759533898304 24.505429025423727 17 22.151085805084747 26.675052966101692 25.744173728813557 25.429687499999996 18 22.289754896118858 26.464863147022605 27.424886452415947 23.82049550444259 19 24.986096398305087 23.838056144067796 28.392478813559325 22.783368644067796 20 26.54479968749793 22.892100715709187 26.826183965730703 23.736915631062175 21 27.047139830508478 22.944915254237287 26.72801906779661 23.279925847457626 22 24.900688559322035 24.43458686440678 27.317929025423727 23.346795550847457 23 24.061837923728813 25.160222457627118 27.569518008474574 23.20842161016949 24 23.91551906779661 23.957229872881356 27.44438559322034 24.682865466101696 25 24.529925847457626 24.034030720338983 27.143802966101692 24.292240466101696 26 23.826958600096663 24.547302352372565 27.38166963499494 24.244069412535836 27 23.74668961864407 25.088718220338986 27.929025423728817 23.235566737288135 28 22.74328314728744 25.445914273229253 27.589745626928323 24.22105695255499 29 23.09683655768747 24.682530224181995 27.538765078986742 24.68186813914379 30 23.482014579016017 24.950509471063764 27.499519991525368 24.06795595839485 31 24.165441809345992 25.280393013678676 26.55887922244733 23.995285954528 32 23.047689669555545 25.291481008216422 27.7358827852409 23.924946536987136 33 22.91048728813559 25.642213983050848 28.00979872881356 23.4375 34 23.540783898305083 24.306806144067796 28.008474576271187 24.143935381355934 35 24.28032309322034 24.61268538135593 26.46649894067797 24.64049258474576 36 24.220074152542374 25.836202330508474 26.414856991525426 23.528866525423727 37 23.734267308443517 25.91847138818451 26.671919173193682 23.675342130178297 38 22.897907838983052 25.740201271186443 27.468882415254235 23.89300847457627 39 23.88704978813559 24.360434322033896 27.824417372881356 23.928098516949152 40 24.493011738690008 25.014731294566307 26.91821317672919 23.5740437900145 41 24.749735169491522 26.009004237288135 26.096398305084744 23.14486228813559 42 22.73910020856093 26.058860529016453 27.58896944416857 23.613069818254047 43 23.45849030370042 26.40346405185484 26.4875494084231 23.650496236021638 44 23.62198989624784 25.081273628942018 27.306615110604966 23.990121364205173 45 24.631549676240418 25.73723169003827 26.15831777433494 23.47290085938638 46 25.130928183160417 26.279653329978746 24.85748525195813 23.731933234902705 47 23.469435046577374 26.561351703864567 25.983355292341713 23.985857957216346 48 23.262665854498266 27.112079239386638 25.946132047988556 23.67912285812654 49 23.813023471380806 25.594729698414277 25.545072334227164 25.047174495977753 50 24.675582627118644 26.424126059322035 25.141022245762713 23.75926906779661 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 148.0 1 81.5 2 15.0 3 34.0 4 53.0 5 58.0 6 63.0 7 56.5 8 50.0 9 74.5 10 99.0 11 174.5 12 250.0 13 481.5 14 713.0 15 1037.5 16 1362.0 17 1417.5 18 1473.0 19 1423.0 20 1373.0 21 1306.5 22 1240.0 23 1138.5 24 1037.0 25 952.5 26 868.0 27 1030.5 28 1193.0 29 1454.5 30 1716.0 31 2051.0 32 2386.0 33 2860.5 34 3335.0 35 3743.0 36 4151.0 37 4916.0 38 5681.0 39 6159.5 40 6638.0 41 7452.0 42 8266.0 43 8331.5 44 8397.0 45 8690.0 46 8983.0 47 9554.5 48 10126.0 49 11012.5 50 11899.0 51 12547.5 52 13196.0 53 12499.0 54 11802.0 55 11088.5 56 10375.0 57 9629.0 58 8883.0 59 7853.0 60 6823.0 61 6132.0 62 5441.0 63 4544.5 64 3648.0 65 3212.5 66 2777.0 67 2392.0 68 2007.0 69 1839.5 70 1672.0 71 1458.0 72 1244.0 73 1011.0 74 778.0 75 591.5 76 405.0 77 318.5 78 232.0 79 190.0 80 148.0 81 103.0 82 58.0 83 40.0 84 22.0 85 13.5 86 5.0 87 2.5 88 0.0 89 1.0 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02846927966101695 2 0.007282838983050848 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0013241525423728813 19 0.0 20 6.620762711864406E-4 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 6.620762711864406E-4 27 0.0 28 0.0013241525423728813 29 0.0013241525423728813 30 6.620762711864406E-4 31 0.0013241525423728813 32 6.620762711864406E-4 33 0.0 34 0.0 35 0.0 36 0.0 37 6.620762711864406E-4 38 0.0 39 0.0 40 6.620762711864406E-4 41 0.0 42 0.0033103813559322032 43 0.001986228813559322 44 0.0046345338983050845 45 0.0013241525423728813 46 0.001986228813559322 47 6.620762711864406E-4 48 0.0026483050847457626 49 0.0033103813559322032 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 151040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.13572563559322 #Duplication Level Percentage of deduplicated Percentage of total 1 64.38472709137048 29.060513771186443 2 15.267041203995715 13.78177966101695 3 7.197864257110586 9.746424788135593 4 3.9047716838044386 7.04978813559322 5 2.4789872823551846 5.594544491525424 6 1.6780836988250483 4.544491525423728 7 1.1514822583720827 3.6381091101694913 8 0.8331744238921567 3.0084745762711864 9 0.5896762647969137 2.3953919491525424 >10 2.432047878192246 17.78667902542373 >50 0.06600853710413213 2.086864406779661 >100 0.016135420181010076 1.306938559322034 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 472 0.3125 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 289 0.19134004237288135 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 203 0.13440148305084745 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 176 0.11652542372881357 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 173 0.11453919491525423 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 6.620762711864406E-4 0.0 23 0.0 0.0 0.0 0.0013241525423728813 0.0 24 0.0 0.0 0.0 0.0013241525423728813 0.0 25 0.0 0.0 0.0 0.001986228813559322 0.0 26 0.0 0.0 0.0 0.001986228813559322 0.0 27 0.0 0.0 0.0 0.0026483050847457626 0.0 28 0.0 0.0 0.0 0.0026483050847457626 0.0 29 0.0 0.0 0.0 0.007282838983050847 0.0 30 0.0 0.0 0.0 0.015889830508474576 0.0 31 0.0 0.0 0.0 0.033103813559322036 0.0 32 0.0 0.0 0.0 0.050979872881355935 0.0 33 0.0 0.0 0.0 0.06885593220338983 0.0 34 0.0 0.0 0.0 0.08209745762711865 0.0 35 0.0 0.0 0.0 0.1026218220338983 0.0 36 0.0 0.0 0.0 0.1330773305084746 0.0 37 0.0 0.0 0.0 0.1840572033898305 0.0 38 0.0 0.0 0.0 0.23834745762711865 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATCT 25 4.4277782E-5 43.994373 4 TACCCGG 20 7.8396866E-4 43.99437 6 CGTGCAT 25 0.0023401494 35.218822 40 GCGCATC 25 0.002347772 35.1955 18 GGCGCAT 25 0.002347772 35.1955 17 TGCCAGG 40 1.8111825E-5 32.995777 26 CCATATC 40 1.8111825E-5 32.995777 3 ACCTATA 35 3.194606E-4 31.445375 1 TCGTGCA 30 0.0057143527 29.349016 39 GTTTAAT 30 0.0057236175 29.339296 2 CGTTTTT 30 0.0057328944 29.32958 30 CGGGAAA 50 8.263931E-5 26.414118 40 TCCATAT 50 8.282592E-5 26.405369 2 AGAGTTA 45 0.0013882278 24.457516 40 CCCCCGA 45 0.0013882278 24.457516 44 TTTCACG 45 0.0013936001 24.441319 25 TTCTGGT 45 0.0013936001 24.441319 37 GTCCATA 50 0.0025621185 22.011765 1 CCGTGCG 50 0.0025720007 21.997187 13 TTCGGTT 50 0.0025720007 21.997187 14 >>END_MODULE