##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062016_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1506465 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.306708088140116 32.0 32.0 32.0 32.0 32.0 2 31.446755815767375 32.0 32.0 32.0 32.0 32.0 3 31.575570623944134 32.0 32.0 32.0 32.0 32.0 4 31.64947011712851 32.0 32.0 32.0 32.0 32.0 5 31.620660287494232 32.0 32.0 32.0 32.0 32.0 6 35.27349457172918 36.0 36.0 36.0 36.0 36.0 7 35.27466818014358 36.0 36.0 36.0 36.0 36.0 8 35.226698927621946 36.0 36.0 36.0 36.0 36.0 9 35.318091691476404 36.0 36.0 36.0 36.0 36.0 10 35.19582067953786 36.0 36.0 36.0 36.0 36.0 11 35.31958990086063 36.0 36.0 36.0 36.0 36.0 12 35.23542531688423 36.0 36.0 36.0 36.0 36.0 13 35.27601305041936 36.0 36.0 36.0 36.0 36.0 14 35.24265349676229 36.0 36.0 36.0 36.0 36.0 15 35.21311613611999 36.0 36.0 36.0 36.0 36.0 16 35.226135356613 36.0 36.0 36.0 36.0 36.0 17 35.20380825309582 36.0 36.0 36.0 36.0 36.0 18 35.202034564360936 36.0 36.0 36.0 36.0 36.0 19 35.19368720813295 36.0 36.0 36.0 36.0 36.0 20 35.1934077459483 36.0 36.0 36.0 36.0 36.0 21 35.18735516590163 36.0 36.0 36.0 36.0 36.0 22 35.17920562376159 36.0 36.0 36.0 36.0 36.0 23 35.14490877650659 36.0 36.0 36.0 36.0 36.0 24 35.12522892997846 36.0 36.0 36.0 36.0 36.0 25 35.111976713697295 36.0 36.0 36.0 36.0 36.0 26 35.070408539196066 36.0 36.0 36.0 36.0 36.0 27 35.05768803125197 36.0 36.0 36.0 36.0 36.0 28 35.0413849641379 36.0 36.0 36.0 36.0 36.0 29 35.01938578061887 36.0 36.0 36.0 36.0 36.0 30 35.00232597504755 36.0 36.0 36.0 36.0 36.0 31 35.0037511658087 36.0 36.0 36.0 36.0 36.0 32 34.98309353353712 36.0 36.0 36.0 36.0 36.0 33 34.953924585038486 36.0 36.0 36.0 36.0 36.0 34 34.95228963168743 36.0 36.0 36.0 36.0 36.0 35 34.935145522796745 36.0 36.0 36.0 36.0 36.0 36 34.917856040465594 36.0 36.0 36.0 32.0 36.0 37 34.91018709362647 36.0 36.0 36.0 32.0 36.0 38 34.892722366599955 36.0 36.0 36.0 32.0 36.0 39 34.8819156103859 36.0 36.0 36.0 32.0 36.0 40 34.86628696982671 36.0 36.0 36.0 32.0 36.0 41 34.8386885855297 36.0 36.0 36.0 32.0 36.0 42 34.805506931790646 36.0 36.0 36.0 32.0 36.0 43 34.81392996186437 36.0 36.0 36.0 32.0 36.0 44 34.758887196184446 36.0 36.0 36.0 32.0 36.0 45 34.74954877809972 36.0 36.0 36.0 32.0 36.0 46 34.73757438772225 36.0 36.0 36.0 32.0 36.0 47 34.71029662156107 36.0 36.0 36.0 32.0 36.0 48 34.69332775736575 36.0 36.0 36.0 32.0 36.0 49 34.684224990291845 36.0 36.0 36.0 32.0 36.0 50 34.257733833842806 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 4.0 20 4.0 21 27.0 22 80.0 23 248.0 24 628.0 25 1533.0 26 3081.0 27 6221.0 28 10611.0 29 17628.0 30 26708.0 31 39948.0 32 61727.0 33 107280.0 34 249396.0 35 981338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.33475719439389 17.604128555198244 11.826501876827274 26.234612373580596 2 16.721676695043524 19.426815862006702 36.622008082889444 27.229499360060327 3 18.91476923097348 22.745132140649986 28.139024987669792 30.201073640706745 4 12.895287975492295 15.533716349201606 34.75208517954284 36.81891049576326 5 15.027299007942435 36.26735436933483 32.71035171743121 15.994994905291527 6 35.71768535660731 34.3368995280993 15.9648341377573 13.980580977536091 7 31.58181570763343 29.554486828436104 19.5466207313147 19.31707673261576 8 28.872559269548248 32.61230762082093 18.510420089414623 20.0047130202162 9 27.117058809862826 14.19163405721341 18.336370244247295 40.35493688867648 10 17.056221020733968 25.997351415399628 30.136378873720933 26.81004869014547 11 37.82656749410043 20.94061262624754 21.430965870431773 19.80185400922026 12 24.70918654544682 23.194845678356735 27.933823841791106 24.162143934405336 13 29.669989014016256 18.916071730840077 25.020428619317407 26.393510635826257 14 23.911142973782994 19.052218272578518 24.37281981327147 32.663818940367015 15 25.645999077310126 26.698662099683695 21.56558565914243 26.089753163863747 16 26.430174050422846 25.395430346640467 22.813682407763896 25.360713195172792 17 24.589950646048862 25.730966202334603 24.531137464195982 25.147945687420552 18 25.424304862246956 24.57357095821739 25.329845253520826 24.672278926014826 19 26.13980411094848 24.60893548804652 24.66980646745859 24.581453933546417 20 26.224009484467924 23.934407947623008 24.389314573275282 25.452267994633786 21 27.088448785733487 23.676686813168576 24.177793709113722 25.05707069198421 22 26.52268721809003 23.62955661100656 24.566651067233558 25.281105103669848 23 24.9832555021192 23.73171630273521 25.048507598915343 26.236520596230246 24 25.094228152278536 24.389923329682368 24.886521291778685 25.62932722626041 25 25.360414003141134 23.937543728285213 24.8128396202493 25.88920264832435 26 25.217977763778816 24.831774602860612 25.035297959920634 24.91494967343994 27 25.662580702548627 24.236918652893078 24.677023853303577 25.423476791254718 28 25.375770775677974 23.949690561238206 25.06118742436624 25.613351238717584 29 25.097762238783478 24.465751187717437 25.037422143686427 25.39906442981265 30 25.191509586764134 24.582064347221152 25.123867205858534 25.102558860156183 31 25.6730007129287 24.308545452855764 24.39855768018045 25.619896154035082 32 25.680220968509598 24.179284003082728 24.147885870109974 25.992609158297704 33 25.107271066550545 24.178539945196167 24.684692100176306 26.02949688807698 34 25.846258830339323 24.072689906230128 24.828039887046003 25.253011376384542 35 26.209587484334172 24.014048792403933 24.904876585168978 24.871487138092913 36 25.12534327095986 24.615539843992185 24.58069000035182 25.678426884696137 37 26.201508191497837 24.25028544117257 24.513090464937203 25.035115902392395 38 25.40377639042394 24.01409923230875 24.906386806198615 25.675737571068698 39 25.926144736667418 24.151719926184565 24.229119923529332 25.69301541361868 40 25.99302206096138 24.394442076866195 24.652928517280888 24.95960734489154 41 24.93902868074926 24.75588238808427 25.013574997046028 25.29151393412044 42 26.19834902763902 24.63301214496958 24.495862611483783 24.672776215907618 43 25.749169212467855 23.785815472895017 24.750299056958237 25.714716257678894 44 25.223148198550447 24.529971494917014 24.585136199065584 25.661744107466948 45 25.572129659931775 24.638666306433805 24.378382576589868 25.410821457044552 46 25.35660516134857 24.56293961609848 24.57156930168584 25.508885920867108 47 25.601780614771457 24.269439462151315 24.93398369407201 25.194796229005224 48 26.26855585310124 24.868261906879855 23.836794791283577 25.026387448735328 49 25.45276277898963 24.906234524547635 24.074991137917895 25.566011558544837 50 25.54278738506821 24.952055744780566 24.152752488155826 25.3524043819954 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 91.0 1 73.5 2 56.0 3 130.0 4 204.0 5 227.5 6 251.0 7 186.5 8 122.0 9 185.5 10 249.0 11 419.5 12 590.0 13 1042.0 14 1494.0 15 1870.0 16 2246.0 17 2191.5 18 2137.0 19 2059.0 20 1981.0 21 2392.0 22 2803.0 23 3479.5 24 4156.0 25 5357.5 26 6559.0 27 8253.0 28 9947.0 29 11759.0 30 13571.0 31 15709.5 32 17848.0 33 20789.5 34 23731.0 35 27980.5 36 32230.0 37 39046.0 38 45862.0 39 51692.0 40 57522.0 41 64215.5 42 70909.0 43 75316.5 44 79724.0 45 88725.0 46 97726.0 47 105129.5 48 112533.0 49 118187.5 50 123842.0 51 122873.0 52 121904.0 53 121585.0 54 121266.0 55 120883.5 56 120501.0 57 115953.0 58 111405.0 59 102679.0 60 93953.0 61 82452.5 62 70952.0 63 61308.0 64 51664.0 65 43372.0 66 35080.0 67 29551.0 68 24022.0 69 21268.5 70 18515.0 71 14376.5 72 10238.0 73 8928.0 74 7618.0 75 5629.5 76 3641.0 77 3252.5 78 2864.0 79 2390.0 80 1916.0 81 1523.5 82 1131.0 83 933.0 84 735.0 85 570.0 86 405.0 87 284.0 88 163.0 89 100.0 90 37.0 91 32.0 92 27.0 93 20.5 94 14.0 95 13.0 96 12.0 97 12.0 98 12.0 99 9.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03093334395422396 2 0.004845781349052252 3 1.327611328507466E-4 4 0.0 5 0.0 6 2.655222657014932E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 6.63805664253733E-5 13 0.0 14 0.0 15 0.0 16 3.319028321268665E-4 17 0.0 18 6.63805664253733E-5 19 0.0 20 1.327611328507466E-4 21 0.0 22 0.0 23 0.0 24 9.957084963805997E-4 25 1.9914169927611993E-4 26 2.655222657014932E-4 27 4.646639649776132E-4 28 0.0018586558599104528 29 2.655222657014932E-4 30 8.629473635298529E-4 31 1.9914169927611993E-4 32 3.9828339855223986E-4 33 6.63805664253733E-5 34 7.301862306791064E-4 35 6.63805664253733E-5 36 1.327611328507466E-4 37 0.0016595141606343326 38 0.0 39 3.319028321268665E-4 40 1.9914169927611993E-4 41 0.0012612307620820929 42 0.005310445314029864 43 0.004181975684798518 44 0.004447497950500011 45 0.0021241781256119458 46 0.0024560809577388125 47 0.0012612307620820929 48 0.004447497950500011 49 0.0031198866219925457 50 0.0018586558599104528 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1506465.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.12186766996704 #Duplication Level Percentage of deduplicated Percentage of total 1 75.69234930793827 38.69534264949341 2 13.738575175199319 14.046832441608675 3 4.252584042513541 6.522001160303723 4 1.8695163236423384 3.822926644163476 5 1.0248250484662396 2.6195485256279327 6 0.6595818118554385 2.0231432461914496 7 0.48420100970060864 1.7327281960505259 8 0.3438011080600565 1.4060603800827396 9 0.25950770342532814 1.1939866626462012 >10 1.50010381733096 13.86207702086618 >50 0.09977953252832167 3.497640108728835 >100 0.06643088127355222 6.89932418120822 >500 0.006786572827481461 2.3802909058864343 >1k 0.0019576652386965755 1.2980978771422376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1700 0.11284696292313463 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.327611328507466E-4 2 0.0 0.0 0.0 0.0 1.327611328507466E-4 3 0.0 0.0 0.0 0.0 1.327611328507466E-4 4 0.0 0.0 0.0 0.0 1.327611328507466E-4 5 0.0 1.327611328507466E-4 0.0 0.0 1.327611328507466E-4 6 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 7 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 8 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 9 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 10 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 11 0.0 1.327611328507466E-4 0.0 0.0 2.655222657014932E-4 12 0.0 1.327611328507466E-4 0.0 0.0 7.301862306791064E-4 13 0.0 1.327611328507466E-4 0.0 0.0 8.62947363529853E-4 14 0.0 1.327611328507466E-4 0.0 0.0 8.62947363529853E-4 15 0.0 1.327611328507466E-4 0.0 0.0 9.957084963805997E-4 16 0.0 1.327611328507466E-4 0.0 0.0 9.957084963805997E-4 17 0.0 1.327611328507466E-4 0.0 1.327611328507466E-4 0.0010620890628059729 18 0.0 1.327611328507466E-4 0.0 1.9914169927611993E-4 0.0012612307620820929 19 0.0 1.327611328507466E-4 0.0 1.9914169927611993E-4 0.0012612307620820929 20 0.0 1.327611328507466E-4 0.0 1.9914169927611993E-4 0.0012612307620820929 21 0.0 1.327611328507466E-4 0.0 2.655222657014932E-4 0.001327611328507466 22 0.0 1.327611328507466E-4 0.0 4.6466396497761315E-4 0.001327611328507466 23 0.0 1.327611328507466E-4 0.0 5.310445314029864E-4 0.001327611328507466 24 0.0 1.327611328507466E-4 0.0 7.301862306791064E-4 0.001327611328507466 25 0.0 1.327611328507466E-4 0.0 7.965667971044797E-4 0.001327611328507466 26 0.0 1.327611328507466E-4 0.0 0.0010620890628059729 0.0013939918949328394 27 0.0 1.327611328507466E-4 0.0 0.0011948501956567195 0.0013939918949328394 28 0.0 1.327611328507466E-4 0.0 0.0017922752934850794 0.0013939918949328394 29 0.0 1.327611328507466E-4 0.0 0.002787983789865679 0.0013939918949328394 30 0.0 1.327611328507466E-4 0.0 0.005376825880455238 0.0013939918949328394 31 0.0 1.327611328507466E-4 0.0 0.008961376467425397 0.0014603724613582128 32 0.0 1.327611328507466E-4 0.0 0.013010591019373168 0.001526753027783586 33 0.0 1.327611328507466E-4 0.0 0.016927044438470193 0.001526753027783586 34 0.0 1.327611328507466E-4 0.0 0.02183920635394782 0.001526753027783586 35 0.0 1.327611328507466E-4 0.0 0.027747076765806043 0.001526753027783586 36 0.0 1.327611328507466E-4 0.0 0.03484979737332099 0.001526753027783586 37 0.0 1.327611328507466E-4 0.0 0.04606811309920907 0.001526753027783586 38 0.0 1.327611328507466E-4 0.0 0.05841489845432851 0.001526753027783586 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1715 0.0 25.155497 1 GGTATCA 900 0.0 23.72303 1 CTATACA 180 0.0 20.776491 4 ACTATAC 110 1.2669807E-7 19.998762 3 GTATTAT 155 3.274181E-11 19.880955 1 GTGTACG 110 2.7839615E-6 18.009048 1 TATACAG 240 0.0 17.415588 5 TATACTG 165 1.6607373E-9 17.332262 5 GTATAGA 230 1.8189894E-12 16.269043 1 GTATAAC 110 5.598602E-5 16.008043 1 CGTCGTA 330 0.0 15.999011 10 ATACCGT 345 0.0 15.941043 6 CAACGCA 2740 0.0 15.896828 5 TCAACGC 2730 0.0 15.8744755 4 TATCAAC 2735 0.0 15.846507 2 ATAATAC 125 9.448815E-6 15.83902 3 TCTACAC 475 0.0 15.746394 3 ATCAACG 2755 0.0 15.730425 3 AACGCAG 2775 0.0 15.696327 6 ATACGAA 425 0.0 15.531028 40 >>END_MODULE