##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062014_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 590064 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.302716315518317 32.0 32.0 32.0 32.0 32.0 2 31.45747410450392 32.0 32.0 32.0 32.0 32.0 3 31.56927892567586 32.0 32.0 32.0 32.0 32.0 4 31.645452018764065 32.0 32.0 32.0 32.0 32.0 5 31.618768472572466 32.0 32.0 32.0 32.0 32.0 6 35.265184793513924 36.0 36.0 36.0 36.0 36.0 7 35.271799330242146 36.0 36.0 36.0 36.0 36.0 8 35.226887252908156 36.0 36.0 36.0 36.0 36.0 9 35.30240787440007 36.0 36.0 36.0 36.0 36.0 10 35.192911277420755 36.0 36.0 36.0 36.0 36.0 11 35.30465847772445 36.0 36.0 36.0 36.0 36.0 12 35.240639998373055 36.0 36.0 36.0 36.0 36.0 13 35.2584448466607 36.0 36.0 36.0 36.0 36.0 14 35.23042754684238 36.0 36.0 36.0 36.0 36.0 15 35.20064772634833 36.0 36.0 36.0 36.0 36.0 16 35.226990631524714 36.0 36.0 36.0 36.0 36.0 17 35.204906586404185 36.0 36.0 36.0 36.0 36.0 18 35.20783677702757 36.0 36.0 36.0 36.0 36.0 19 35.200573158165895 36.0 36.0 36.0 36.0 36.0 20 35.20255429919467 36.0 36.0 36.0 36.0 36.0 21 35.19285196182109 36.0 36.0 36.0 36.0 36.0 22 35.17115939965834 36.0 36.0 36.0 36.0 36.0 23 35.14369288755118 36.0 36.0 36.0 36.0 36.0 24 35.12377809864692 36.0 36.0 36.0 36.0 36.0 25 35.125413514466224 36.0 36.0 36.0 36.0 36.0 26 35.084029867946526 36.0 36.0 36.0 36.0 36.0 27 35.06644194528051 36.0 36.0 36.0 36.0 36.0 28 35.05502115024811 36.0 36.0 36.0 36.0 36.0 29 35.02378047127091 36.0 36.0 36.0 36.0 36.0 30 35.00863126711679 36.0 36.0 36.0 36.0 36.0 31 35.02169256216275 36.0 36.0 36.0 36.0 36.0 32 34.98328316928333 36.0 36.0 36.0 36.0 36.0 33 34.98305946473603 36.0 36.0 36.0 36.0 36.0 34 34.97042185254481 36.0 36.0 36.0 36.0 36.0 35 34.964668239377424 36.0 36.0 36.0 36.0 36.0 36 34.9340596952195 36.0 36.0 36.0 36.0 36.0 37 34.938681227799016 36.0 36.0 36.0 36.0 36.0 38 34.94144364001193 36.0 36.0 36.0 36.0 36.0 39 34.91751233764473 36.0 36.0 36.0 36.0 36.0 40 34.89401997071504 36.0 36.0 36.0 36.0 36.0 41 34.88450574852897 36.0 36.0 36.0 36.0 36.0 42 34.87393570866889 36.0 36.0 36.0 32.0 36.0 43 34.86339617397435 36.0 36.0 36.0 32.0 36.0 44 34.83652620732666 36.0 36.0 36.0 32.0 36.0 45 34.82309037663711 36.0 36.0 36.0 32.0 36.0 46 34.811215393584426 36.0 36.0 36.0 32.0 36.0 47 34.80200113885952 36.0 36.0 36.0 32.0 36.0 48 34.78526905556007 36.0 36.0 36.0 32.0 36.0 49 34.76686766181295 36.0 36.0 36.0 32.0 36.0 50 34.373588288728 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 5.0 22 27.0 23 91.0 24 221.0 25 615.0 26 1265.0 27 2465.0 28 4417.0 29 6837.0 30 10366.0 31 15570.0 32 23601.0 33 40000.0 34 92383.0 35 392199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75029666045092 17.459738938803188 12.400067808103069 26.38989659264282 2 16.464815944681714 18.91261609382415 37.656769032607954 26.965798928886176 3 19.665966172931565 21.460698911975054 27.79903738602854 31.074297529064843 4 13.664280484828764 15.309017326934027 33.40315626779468 37.62354592044253 5 15.377484476260204 35.76035819843271 32.75407413433119 16.108083190975893 6 36.54813130123394 32.95021040126224 15.896777123798644 14.60488117370518 7 32.12092247620597 29.34173242224572 18.677296022126413 19.86004907942189 8 28.375057620868244 33.705157406654195 18.013639198459828 19.906145774017734 9 26.781332194473823 15.337488814772634 18.21870170015456 39.662477290598986 10 17.22751168521274 27.024448278316516 30.44696997942589 25.301070057044857 11 37.49661053716207 21.319382304292418 20.826384934515577 20.357622224029935 12 24.760195504216494 23.375430461780418 27.90188860869329 23.962485425309797 13 30.153000352504133 19.416537867078826 24.252453971094663 26.17800780932238 14 23.534396268879306 19.01268336993953 24.51666259931126 32.936257761869896 15 25.534687762683372 26.55881395916375 21.645448629301228 26.261049648851646 16 25.89553996776615 25.921130455561524 22.41184415901353 25.77148541765879 17 24.504460533094715 26.019042002223486 24.431417608937338 25.04507985574446 18 25.189979392065947 25.501301553729768 24.685796794923938 24.62292225928035 19 26.19410775780254 24.998813688006724 24.26838444643293 24.538694107757802 20 26.280672676214834 24.715580253567005 24.542547295957537 24.461199774260628 21 26.374641351855647 24.48924945302451 24.22012564760034 24.915983547519502 22 26.288334824696978 24.37837251552374 24.10823232734076 25.225060332438513 23 25.581123403563005 24.41345345589631 24.541066731744355 25.464356408796334 24 25.33462585287648 24.6374109839305 24.322698292721782 25.70526487047124 25 25.770468577084145 24.25469822713846 24.512806259670576 25.462026936106824 26 25.428853239151138 24.64469835373232 24.53928570218045 25.387162704936088 27 25.293782687243038 24.8582352362972 24.63842782622843 25.20955425023133 28 25.8600878560679 24.497674796968425 24.289389481676317 25.352847865287366 29 25.349751974795826 24.877597400946684 24.508821969254026 25.26382865500347 30 25.74407939558484 24.703334248497605 24.246938436560477 25.30564791935708 31 25.360471816425452 24.519879334304985 24.560892112666508 25.558756736603055 32 25.591634749008573 24.692404162288582 24.56140053553876 25.154560553164085 33 25.43033540486355 24.564326182119537 24.42790007168726 25.577438341329657 34 25.673325921607443 24.53428149192619 24.43717206502434 25.355220521442035 35 25.515580539705084 24.55991987296272 24.62787871803519 25.29662086929701 36 25.73475329711115 24.58606044788514 24.52030464595246 25.158881609051253 37 25.901571553741782 24.304935319369616 24.449159651760098 25.344333475128504 38 25.742461834648445 24.699693592559452 24.21364462160037 25.344199951191737 39 25.656160973187518 24.715919201574074 24.314096339192048 25.31382348604636 40 25.82245315762358 24.813918490197672 24.11213020960438 25.251498142574363 41 25.44601925589735 24.75608123338073 24.445600649433185 25.35229886128873 42 25.655044776928865 24.54545146397847 24.397324908988605 25.40217885010406 43 25.538099111924616 24.32191037895736 24.310724696630736 25.82926581248729 44 25.46933338304756 24.490584520684227 24.583798698052163 25.45628339821605 45 25.31027084191313 24.4850851369971 24.609481585427652 25.59516243566212 46 25.717186199790188 24.42441220983342 24.342893556297867 25.515508034078525 47 25.618285629064214 24.644654178649933 24.491279685590765 25.24578050669509 48 25.495862095848874 24.814205307160787 24.292031123682914 25.397901473307428 49 25.59453596366348 24.397837434750187 24.33140126093146 25.676225340654874 50 25.28721996159667 24.823702277592012 24.48593600913816 25.403141751673154 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 1.0 2 1.0 3 2.5 4 4.0 5 8.5 6 13.0 7 10.5 8 8.0 9 11.0 10 14.0 11 22.0 12 30.0 13 71.5 14 113.0 15 146.5 16 180.0 17 179.0 18 178.0 19 188.5 20 199.0 21 268.5 22 338.0 23 559.5 24 781.0 25 1058.5 26 1336.0 27 1952.5 28 2569.0 29 3428.0 30 4287.0 31 5598.5 32 6910.0 33 8144.5 34 9379.0 35 11219.0 36 13059.0 37 15522.5 38 17986.0 39 20374.5 40 22763.0 41 25892.5 42 29022.0 43 31305.0 44 33588.0 45 37150.5 46 40713.0 47 43071.0 48 45429.0 49 46877.0 50 48325.0 51 49839.5 52 51354.0 53 52071.0 54 52788.0 55 51203.0 56 49618.0 57 46294.5 58 42971.0 59 39867.0 60 36763.0 61 31721.5 62 26680.0 63 23030.5 64 19381.0 65 16498.5 66 13616.0 67 10902.5 68 8189.0 69 6480.5 70 4772.0 71 3779.5 72 2787.0 73 2263.0 74 1739.0 75 1361.5 76 984.0 77 806.0 78 628.0 79 469.5 80 311.0 81 229.5 82 148.0 83 101.5 84 55.0 85 43.5 86 32.0 87 21.5 88 11.0 89 6.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 2.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.027793595271021446 2 0.004067355405515334 3 6.77892567585889E-4 4 0.0 5 0.0 6 1.6947314189647226E-4 7 0.0 8 0.0 9 0.0 10 3.389462837929445E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 1.6947314189647226E-4 17 0.0 18 0.0 19 0.0 20 5.084194256894167E-4 21 1.6947314189647226E-4 22 0.0 23 0.0 24 3.389462837929445E-4 25 1.6947314189647226E-4 26 3.389462837929445E-4 27 3.389462837929445E-4 28 0.001355785135171778 29 5.084194256894167E-4 30 0.0010168388513788335 31 6.77892567585889E-4 32 6.77892567585889E-4 33 1.6947314189647226E-4 34 0.001355785135171778 35 1.6947314189647226E-4 36 3.389462837929445E-4 37 0.0018642045608611949 38 0.0 39 5.084194256894167E-4 40 0.0 41 0.0018642045608611949 42 0.004745247973101223 43 0.004067355405515334 44 0.004236828547411807 45 0.002542097128447084 46 0.002542097128447084 47 8.473657094823613E-4 48 0.00525366739879064 49 0.004067355405515334 50 0.0018642045608611949 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 590064.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.2053629675558 #Duplication Level Percentage of deduplicated Percentage of total 1 65.99115612891939 35.110834144878005 2 17.20904348408033 18.312268097898897 3 7.138923418533059 11.39487035041907 4 3.5506124878201 7.556465046864187 5 1.94399212208955 5.171540323092177 6 1.2435800224675344 3.969907588475182 7 0.7771553045388541 2.8944181042105765 8 0.5084934872066427 2.164366444277409 9 0.3561075309026098 1.7052147393438102 >10 1.248325845505023 10.335829014504824 >50 0.02685543599212733 0.9540995903637335 >100 0.005754731944761828 0.430186555672187 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6947314189647226E-4 2 0.0 0.0 0.0 0.0 1.6947314189647226E-4 3 0.0 0.0 0.0 0.0 1.6947314189647226E-4 4 0.0 0.0 0.0 0.0 1.6947314189647226E-4 5 0.0 0.0 0.0 0.0 1.6947314189647226E-4 6 0.0 0.0 0.0 0.0 1.6947314189647226E-4 7 0.0 0.0 0.0 0.0 1.6947314189647226E-4 8 0.0 0.0 0.0 0.0 1.6947314189647226E-4 9 0.0 0.0 0.0 0.0 1.6947314189647226E-4 10 0.0 0.0 0.0 5.084194256894167E-4 1.6947314189647226E-4 11 0.0 0.0 0.0 5.084194256894167E-4 1.6947314189647226E-4 12 0.0 0.0 0.0 5.084194256894167E-4 5.084194256894167E-4 13 0.0 0.0 0.0 5.084194256894167E-4 8.473657094823612E-4 14 0.0 0.0 0.0 5.084194256894167E-4 8.473657094823612E-4 15 0.0 0.0 0.0 5.084194256894167E-4 0.0010168388513788335 16 0.0 0.0 0.0 6.77892567585889E-4 0.0010168388513788335 17 0.0 0.0 0.0 6.77892567585889E-4 0.0010168388513788335 18 0.0 0.0 0.0 6.77892567585889E-4 0.0010168388513788335 19 0.0 0.0 0.0 6.77892567585889E-4 0.0010168388513788335 20 0.0 0.0 0.0 8.473657094823612E-4 0.001355785135171778 21 0.0 0.0 0.0 0.0010168388513788335 0.0015252582770682503 22 0.0 0.0 0.0 0.0015252582770682503 0.0015252582770682503 23 0.0 0.0 0.0 0.002033677702757667 0.0015252582770682503 24 0.0 0.0 0.0 0.003389462837929445 0.0015252582770682503 25 0.0 0.0 0.0 0.00457577483120475 0.0015252582770682503 26 0.0 0.0 0.0 0.005423140540687112 0.0015252582770682503 27 0.0 0.0 0.0 0.006439979392065945 0.0015252582770682503 28 0.0 0.0 0.0 0.008643130236720085 0.0016947314189647224 29 0.0 0.0 0.0 0.011015754223270696 0.0016947314189647224 30 0.0 0.0 0.0 0.01287995878413189 0.0016947314189647224 31 0.0 0.0 0.0 0.019150465034301362 0.0016947314189647224 32 0.0 0.0 0.0 0.028132541554814393 0.0016947314189647224 33 0.0 0.0 0.0 0.03677567179153448 0.0016947314189647224 34 0.0 0.0 0.0 0.04474090946066867 0.002542097128447084 35 0.0 0.0 0.0 0.05338403969738876 0.002542097128447084 36 0.0 0.0 0.0 0.06304400878548767 0.002542097128447084 37 0.0 0.0 0.0 0.08151658125220315 0.002542097128447084 38 0.0 0.0 0.0 0.1062596599690881 0.002711570270343556 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 25 0.0023525537 35.19776 6 TGTACCG 45 1.0365347E-6 34.220047 5 GTGTCGC 55 4.957852E-6 27.99822 11 GGTATCA 250 0.0 26.409512 1 GTATAGG 50 8.313925E-5 26.40951 1 GTATCAA 575 0.0 25.644018 1 GCATTAT 45 0.001394437 24.45325 1 TCGTTTA 45 0.0013978845 24.44289 30 GTTATGA 55 1.5883839E-4 24.008648 1 TATACTC 50 0.0025798392 21.998602 3 GTATTAG 75 5.451408E-5 20.540731 1 ACGTGAA 150 4.638423E-10 19.067072 34 TATAAAC 70 8.120063E-4 18.855944 2 GAGCGAT 60 0.007410434 18.332169 11 GTCCTAG 135 5.4886186E-8 17.932384 1 TACGCTC 100 2.4790714E-5 17.600372 34 ACACCGT 75 0.001290358 17.59888 6 CTTAGTT 75 0.001290358 17.59888 14 CCCTAGA 165 1.6461854E-9 17.339577 1 CTACGCT 115 4.2645424E-6 17.217754 33 >>END_MODULE