##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062012_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 746272 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262822402555635 32.0 32.0 32.0 32.0 32.0 2 31.39352943698812 32.0 32.0 32.0 32.0 32.0 3 31.547202628532226 32.0 32.0 32.0 32.0 32.0 4 31.62984809828052 32.0 32.0 32.0 32.0 32.0 5 31.595743911067277 32.0 32.0 32.0 32.0 32.0 6 35.24705067321298 36.0 36.0 36.0 36.0 36.0 7 35.2523222095965 36.0 36.0 36.0 36.0 36.0 8 35.201163918785646 36.0 36.0 36.0 36.0 36.0 9 35.30137670983234 36.0 36.0 36.0 36.0 36.0 10 35.162459532181295 36.0 36.0 36.0 36.0 36.0 11 35.302329445564084 36.0 36.0 36.0 36.0 36.0 12 35.2214527678916 36.0 36.0 36.0 36.0 36.0 13 35.25785102482741 36.0 36.0 36.0 36.0 36.0 14 35.219390517130485 36.0 36.0 36.0 36.0 36.0 15 35.18686216285751 36.0 36.0 36.0 36.0 36.0 16 35.206238476051624 36.0 36.0 36.0 36.0 36.0 17 35.18777871875134 36.0 36.0 36.0 36.0 36.0 18 35.180763850177954 36.0 36.0 36.0 36.0 36.0 19 35.17420457956349 36.0 36.0 36.0 36.0 36.0 20 35.16065590026157 36.0 36.0 36.0 36.0 36.0 21 35.15957050512414 36.0 36.0 36.0 36.0 36.0 22 35.13537155353544 36.0 36.0 36.0 36.0 36.0 23 35.113305872389695 36.0 36.0 36.0 36.0 36.0 24 35.10045934994211 36.0 36.0 36.0 36.0 36.0 25 35.07720375412718 36.0 36.0 36.0 36.0 36.0 26 35.03838278804511 36.0 36.0 36.0 36.0 36.0 27 35.028430652630675 36.0 36.0 36.0 36.0 36.0 28 35.00382166287895 36.0 36.0 36.0 36.0 36.0 29 34.98941136743707 36.0 36.0 36.0 36.0 36.0 30 34.966108871832255 36.0 36.0 36.0 36.0 36.0 31 34.971128489344366 36.0 36.0 36.0 36.0 36.0 32 34.936299365378844 36.0 36.0 36.0 36.0 36.0 33 34.91800710732816 36.0 36.0 36.0 32.0 36.0 34 34.903930470391494 36.0 36.0 36.0 32.0 36.0 35 34.894333433386215 36.0 36.0 36.0 32.0 36.0 36 34.86812181081429 36.0 36.0 36.0 32.0 36.0 37 34.8495776338922 36.0 36.0 36.0 32.0 36.0 38 34.831340315595384 36.0 36.0 36.0 32.0 36.0 39 34.796268652716435 36.0 36.0 36.0 32.0 36.0 40 34.79635843231422 36.0 36.0 36.0 32.0 36.0 41 34.76653284593285 36.0 36.0 36.0 32.0 36.0 42 34.74478742335234 36.0 36.0 36.0 32.0 36.0 43 34.74237007418207 36.0 36.0 36.0 32.0 36.0 44 34.69586692251619 36.0 36.0 36.0 32.0 36.0 45 34.672505467175505 36.0 36.0 36.0 32.0 36.0 46 34.64812829638523 36.0 36.0 36.0 32.0 36.0 47 34.62139407615454 36.0 36.0 36.0 32.0 36.0 48 34.59715626473994 36.0 36.0 36.0 32.0 36.0 49 34.58489129968698 36.0 36.0 36.0 32.0 36.0 50 34.16354760730672 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 1.0 20 5.0 21 11.0 22 30.0 23 123.0 24 286.0 25 746.0 26 1604.0 27 3055.0 28 5457.0 29 8916.0 30 13898.0 31 21100.0 32 32392.0 33 56756.0 34 130513.0 35 471377.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.737500737221936 18.04357383746803 12.04446386540204 26.174461559907996 2 16.042131500130655 19.944923516050576 37.46969788337454 26.54324710044423 3 18.66203741546279 23.42680722366868 28.47686290064307 29.43429246022547 4 12.658253291025257 16.04307812700999 35.3333637065306 35.96530487543416 5 14.589070190319603 36.78757448701611 33.25708757274502 15.366267749919265 6 34.98313615295248 34.89389243317776 16.385870548366476 13.737100865503283 7 30.69082050512414 30.023905492903392 20.193709532181295 19.091564469791177 8 27.902962994725783 33.80657454654603 18.965471034689767 19.32499142403842 9 27.03571887997942 14.432405342824065 18.523541014536253 40.00833476266026 10 16.39513848875072 27.09207123427178 31.294705669529794 25.218084607447704 11 37.35943462973286 21.08373354487372 21.930609750868317 19.626222074525106 12 24.319283049611936 23.559908451610138 28.868964667038295 23.25184383173963 13 29.730580806997985 19.56619034346726 25.009915955576517 25.693312893958236 14 23.25264782813773 19.547966425110417 25.16307726941383 32.03630847733802 15 25.03979782170576 27.566490502122548 21.93221774366451 25.461493932507185 16 25.52377225906476 25.700384177823278 24.05727693365261 24.718566629459353 17 24.00197247116333 26.203984606148968 25.23731293683804 24.556729985849664 18 24.42356730999865 25.38916827801161 26.27195750605343 23.915306905936315 19 25.68312893958235 24.923620342180865 25.144183354058576 24.24906736417821 20 25.622801551727605 24.77886541644054 25.00961454711128 24.588718484720577 21 26.22864049569058 24.394188714034563 24.64892157283135 24.72824921744351 22 25.775856524162773 24.60697976073067 25.019295913554306 24.597867801552248 23 24.63337764246816 24.513046181553104 25.430004073581753 25.423572102396978 24 24.936483603657685 24.903251396288713 25.335404092921536 24.82486090713206 25 24.983651985613747 24.646105688573005 25.394764347392623 24.97547797842062 26 24.499878730055784 25.503672268310755 25.691808181768238 24.304640819865224 27 25.032360941750305 24.972597049325312 25.09547482814531 24.899567180779076 28 24.584625898653943 25.177184742480783 25.259060240802405 24.979129118062858 29 24.694044640739467 24.90442454396471 25.38896832107457 25.012562494221253 30 24.665431170679348 25.204922151692642 25.31868962384373 24.81095705378428 31 25.21560503408945 24.77890099052356 24.94867822992153 25.05681574546546 32 24.840573146072384 25.180129899888374 24.887741250785577 25.09155570325366 33 24.488991919814545 24.819033325740016 25.446152196926047 25.2458225575194 34 25.029714486331333 24.958962518877243 25.509434265660236 24.501888729131185 35 25.18840315595386 24.872566570901764 25.528359632948845 24.41067064019553 36 24.41254663179109 25.37653831310836 25.216945028086275 24.993970027014278 37 25.303847710321577 24.927036349164233 24.97688479381236 24.79223114670183 38 24.756255091977188 24.932598301959608 25.232354959049786 25.07879164701342 39 25.379220333713892 24.683893721826475 24.929515937974024 25.00737000648561 40 25.474089876077354 24.928980318168176 25.222573002872945 24.374356802881522 41 24.681749719939752 25.197114173460474 25.51697245493576 24.604163651664013 42 25.584499294460073 25.421682387766893 24.974907435573417 24.018910882199624 43 24.928910460681657 24.77507296560633 25.384526735294983 24.91148983841703 44 24.648912163719494 25.198592432583094 24.970921350964552 25.18157405273286 45 24.67712238930772 25.392022598082704 25.08140616248 24.84944885012958 46 24.733571766446325 25.14401797762445 24.89343540664727 25.228974849281954 47 25.106229020522203 25.05664877757901 25.187567419080352 24.649554782818438 48 25.308574973902953 25.329479412478072 24.592329947082288 24.769615666536684 49 24.951959026476807 25.404227605670044 24.657146915595295 24.986666452257857 50 24.841978878703294 25.702937712140926 24.698999411733965 24.75608399742181 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 139.0 1 88.5 2 38.0 3 79.5 4 121.0 5 122.0 6 123.0 7 87.5 8 52.0 9 90.5 10 129.0 11 214.0 12 299.0 13 578.5 14 858.0 15 1032.0 16 1206.0 17 1254.0 18 1302.0 19 1332.0 20 1362.0 21 1650.0 22 1938.0 23 2397.0 24 2856.0 25 3688.5 26 4521.0 27 5939.5 28 7358.0 29 8725.5 30 10093.0 31 11534.0 32 12975.0 33 15064.5 34 17154.0 35 19862.5 36 22571.0 37 25419.0 38 28267.0 39 30430.0 40 32593.0 41 35108.0 42 37623.0 43 38968.0 44 40313.0 45 44160.5 46 48008.0 47 50686.0 48 53364.0 49 55650.0 50 57936.0 51 57158.5 52 56381.0 53 55815.5 54 55250.0 55 54960.0 56 54670.0 57 52688.0 58 50706.0 59 46815.5 60 42925.0 61 37600.0 62 32275.0 63 27716.5 64 23158.0 65 19529.5 66 15901.0 67 13404.0 68 10907.0 69 9563.5 70 8220.0 71 6440.5 72 4661.0 73 3968.5 74 3276.0 75 2410.5 76 1545.0 77 1400.0 78 1255.0 79 1024.0 80 793.0 81 648.5 82 504.0 83 419.0 84 334.0 85 266.0 86 198.0 87 135.5 88 73.0 89 48.0 90 23.0 91 15.0 92 7.0 93 4.0 94 1.0 95 4.0 96 7.0 97 4.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03055186312765319 2 0.004957977788259509 3 4.0199819904806827E-4 4 0.0 5 1.339993996826894E-4 6 1.339993996826894E-4 7 0.0 8 0.0 9 0.0 10 2.679987993653788E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.0199819904806827E-4 17 0.0 18 1.339993996826894E-4 19 0.0 20 9.37995797778826E-4 21 0.0 22 0.0 23 0.0 24 0.0010719951974615153 25 5.359975987307577E-4 26 4.0199819904806827E-4 27 2.679987993653788E-4 28 0.00227798979460572 29 4.0199819904806827E-4 30 0.0017419921958749624 31 0.0 32 6.699969984134471E-4 33 2.679987993653788E-4 34 4.0199819904806827E-4 35 0.0 36 0.0 37 0.0013399939968268943 38 0.0 39 5.359975987307577E-4 40 0.0 41 5.359975987307577E-4 42 0.00468997898889413 43 0.0040199819904806824 44 0.0026799879936537886 45 0.001875991595557652 46 0.0014739933965095837 47 9.37995797778826E-4 48 0.002545988593971099 49 0.00455597958921144 50 0.0014739933965095837 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 746272.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.83970631548428 #Duplication Level Percentage of deduplicated Percentage of total 1 80.09635678904606 52.73520607931038 2 12.899712671322238 16.986265876679752 3 3.480127747039448 6.873917664163357 4 1.3426719377491483 3.5360450423778444 5 0.6508800364383398 2.1426875222856 6 0.39616209712367995 1.5649917676769671 7 0.22410647714039755 1.0328573246825097 8 0.16084877046746182 0.8472188647027543 9 0.11142446118692843 0.66025384208176 >10 0.5512110869992692 6.454468857574515 >50 0.04785041130797355 2.2197149017234774 >100 0.037829577372486996 4.649778406143108 >500 8.179368065533466E-4 0.29659385059799653 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.339993996826894E-4 2 0.0 0.0 0.0 0.0 1.339993996826894E-4 3 0.0 0.0 0.0 0.0 1.339993996826894E-4 4 0.0 0.0 0.0 0.0 1.339993996826894E-4 5 0.0 0.0 0.0 0.0 1.339993996826894E-4 6 0.0 0.0 0.0 0.0 1.339993996826894E-4 7 0.0 0.0 0.0 0.0 1.339993996826894E-4 8 0.0 0.0 0.0 0.0 1.339993996826894E-4 9 0.0 0.0 0.0 0.0 1.339993996826894E-4 10 0.0 0.0 0.0 0.0 1.339993996826894E-4 11 0.0 0.0 0.0 0.0 1.339993996826894E-4 12 0.0 0.0 0.0 0.0 4.0199819904806827E-4 13 0.0 0.0 0.0 0.0 4.0199819904806827E-4 14 0.0 0.0 0.0 0.0 4.0199819904806827E-4 15 0.0 0.0 0.0 0.0 5.359975987307577E-4 16 0.0 0.0 0.0 0.0 5.359975987307577E-4 17 0.0 0.0 0.0 0.0 5.359975987307577E-4 18 0.0 0.0 0.0 0.0 5.359975987307577E-4 19 0.0 0.0 0.0 0.0 6.699969984134471E-4 20 0.0 0.0 0.0 1.339993996826894E-4 8.039963980961365E-4 21 0.0 0.0 0.0 1.339993996826894E-4 0.0010719951974615153 22 0.0 0.0 0.0 1.339993996826894E-4 0.0010719951974615153 23 0.0 0.0 0.0 4.0199819904806827E-4 0.0010719951974615153 24 0.0 0.0 0.0 6.699969984134471E-4 0.0010719951974615153 25 0.0 0.0 0.0 0.0012059945971442047 0.0010719951974615153 26 0.0 0.0 0.0 0.0020099909952403412 0.0010719951974615153 27 0.0 0.0 0.0 0.0021439903949230306 0.0010719951974615153 28 0.0 0.0 0.0 0.002813987393336478 0.0010719951974615153 29 0.0 0.0 0.0 0.0037519831911153037 0.0010719951974615153 30 0.0 0.0 0.0 0.005091977187942198 0.0010719951974615153 31 0.0 0.0 0.0 0.008173963380644056 0.0010719951974615153 32 0.0 0.0 0.0 0.013399939968268942 0.0010719951974615153 33 0.0 0.0 0.0 0.017285922559066934 0.0010719951974615153 34 0.0 0.0 0.0 0.022109900947643753 0.0010719951974615153 35 0.0 0.0 0.0 0.028005874533682088 0.0010719951974615153 36 0.0 0.0 0.0 0.039529822906393376 0.0010719951974615153 37 0.0 0.0 0.0 0.051991767076883494 0.0010719951974615153 38 0.0 0.0 0.0 0.06914369023626774 0.0010719951974615153 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 20 7.854233E-4 44.000538 35 TAACGGC 30 0.0057414 29.335657 36 CGTCGTA 150 0.0 27.865139 10 GTATCAA 840 0.0 27.243906 1 TAGGACG 155 0.0 26.966265 4 ATACCGT 175 0.0 26.398554 6 GGTATCA 350 0.0 23.890808 1 CCGTCGT 175 0.0 23.884405 9 GTAGGAC 195 0.0 23.69101 3 ACCGTCG 180 0.0 23.22095 8 GTCGTAG 205 0.0 22.535349 11 CGCGTAT 50 0.002577332 22.003216 42 ACGCGTA 60 2.8685134E-4 22.003216 41 GCATACG 50 0.002578335 22.001741 37 TACCGTC 200 0.0 21.998793 7 CGTGATT 135 1.1277734E-10 21.185444 28 GTCCTAA 170 0.0 20.710299 1 TACGCGT 65 4.924873E-4 20.310661 40 ATACGCG 55 0.004478241 20.002924 39 TCGTACT 55 0.0044817156 20.000244 44 >>END_MODULE