##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062009_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15958 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27823035468104 32.0 32.0 32.0 32.0 32.0 2 31.575260057651334 32.0 32.0 32.0 32.0 32.0 3 31.62482767264068 32.0 32.0 32.0 32.0 32.0 4 31.703972928938462 32.0 32.0 32.0 32.0 32.0 5 31.6624263692192 32.0 32.0 32.0 32.0 32.0 6 35.35687429502444 36.0 36.0 36.0 36.0 36.0 7 35.352926431883695 36.0 36.0 36.0 36.0 36.0 8 35.28788068680286 36.0 36.0 36.0 36.0 36.0 9 35.37291640556461 36.0 36.0 36.0 36.0 36.0 10 35.26469482391277 36.0 36.0 36.0 36.0 36.0 11 35.37128712871287 36.0 36.0 36.0 36.0 36.0 12 35.25498182729665 36.0 36.0 36.0 36.0 36.0 13 35.29057526005765 36.0 36.0 36.0 36.0 36.0 14 35.30548940970046 36.0 36.0 36.0 36.0 36.0 15 35.302168191502695 36.0 36.0 36.0 36.0 36.0 16 35.26883068053641 36.0 36.0 36.0 36.0 36.0 17 35.28361950119063 36.0 36.0 36.0 36.0 36.0 18 35.21857375610979 36.0 36.0 36.0 36.0 36.0 19 35.256987091114176 36.0 36.0 36.0 36.0 36.0 20 35.23461586664995 36.0 36.0 36.0 36.0 36.0 21 35.22985336508334 36.0 36.0 36.0 36.0 36.0 22 35.18811881188119 36.0 36.0 36.0 36.0 36.0 23 35.196891841082845 36.0 36.0 36.0 36.0 36.0 24 35.20585286376739 36.0 36.0 36.0 36.0 36.0 25 35.19858378242888 36.0 36.0 36.0 36.0 36.0 26 35.06980824664745 36.0 36.0 36.0 36.0 36.0 27 35.104649705476874 36.0 36.0 36.0 36.0 36.0 28 35.05965659857125 36.0 36.0 36.0 36.0 36.0 29 35.06579771901241 36.0 36.0 36.0 36.0 36.0 30 35.04900363454067 36.0 36.0 36.0 36.0 36.0 31 35.005389146509586 36.0 36.0 36.0 36.0 36.0 32 35.03327484647199 36.0 36.0 36.0 36.0 36.0 33 35.01403684672265 36.0 36.0 36.0 36.0 36.0 34 34.99348289259306 36.0 36.0 36.0 36.0 36.0 35 34.91765885449304 36.0 36.0 36.0 36.0 36.0 36 34.944855245018175 36.0 36.0 36.0 36.0 36.0 37 34.84640932447675 36.0 36.0 36.0 36.0 36.0 38 34.90506329113924 36.0 36.0 36.0 36.0 36.0 39 34.93363830053892 36.0 36.0 36.0 36.0 36.0 40 34.899862138112546 36.0 36.0 36.0 36.0 36.0 41 34.90036345406693 36.0 36.0 36.0 36.0 36.0 42 34.831871161799725 36.0 36.0 36.0 32.0 36.0 43 34.82591803484146 36.0 36.0 36.0 32.0 36.0 44 34.81169319463592 36.0 36.0 36.0 32.0 36.0 45 34.799097631282116 36.0 36.0 36.0 32.0 36.0 46 34.76576012031583 36.0 36.0 36.0 32.0 36.0 47 34.70134102017797 36.0 36.0 36.0 32.0 36.0 48 34.79577641308435 36.0 36.0 36.0 32.0 36.0 49 34.756673768642685 36.0 36.0 36.0 32.0 36.0 50 34.32817395663617 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 22 2.0 23 4.0 24 12.0 25 14.0 26 42.0 27 73.0 28 111.0 29 197.0 30 278.0 31 387.0 32 604.0 33 1027.0 34 2328.0 35 10879.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.15471414242728 20.285857572718154 12.456118355065197 26.10330992978937 2 16.20503822534152 20.654217320466223 37.30417345532022 25.836570998872038 3 18.636420604085725 22.947737811755857 29.402180724401557 29.01366085975686 4 13.729790700589046 16.78781802230856 35.95062037849355 33.53177089860885 5 15.446797844341395 35.286376738939715 33.350043865146006 15.916781551572878 6 33.418974808873294 35.562100513848854 17.05100889835819 13.967915778919664 7 28.343150770773278 29.815766386765258 21.75711242010277 20.08397042235869 8 25.892969043739818 33.9516230104023 20.24063165810252 19.91477628775536 9 25.535781426243894 15.31520240631658 19.952374984333876 39.196641183105655 10 16.64995613485399 26.8705351547813 31.658102519112667 24.821406191252038 11 35.41797217696453 22.314826419350794 22.960270710615365 19.306930693069308 12 22.534152149392153 23.768642687053514 29.176588544930443 24.52061661862389 13 29.264318836946984 18.96854242386264 26.024564481764635 25.742574257425744 14 23.01040230605339 19.664118310565236 25.855370347161298 31.47010903622008 15 25.730041358566236 27.8731670635418 21.16806617370598 25.228725404185987 16 24.67101140493796 27.80423611981451 24.113297405689938 23.411455069557586 17 23.781175585913022 26.97079834565735 25.968166436896855 23.279859631532773 18 24.733675899235493 26.44441659355809 25.078330617871913 23.743576889334502 19 23.799974934202282 26.06216317834315 25.748840706855496 24.389021180599073 20 25.053264820152904 25.961899987467103 25.849103897731545 23.13573129464845 21 24.68354430379747 26.50081463842587 24.82767264068179 23.987968417094873 22 24.633412708359444 26.11856122321093 26.174959268078705 23.073066800350922 23 24.457952124326358 26.350419852111795 24.73994234866525 24.451685674896602 24 23.85637297907006 26.1624263692192 25.366587291640556 24.614613360070184 25 24.3451560345908 26.20629151522747 25.097129966161173 24.351422484020553 26 24.27622509086352 25.73630780799599 25.924301290888586 24.06316581025191 27 24.95300162927685 24.93420228098759 25.654843965409196 24.457952124326358 28 24.016044121333668 25.538982201052896 25.839809476059163 24.605164201554274 29 24.056899360822158 25.203659606466978 26.776538413335004 23.96290261937586 30 24.733675899235493 25.128462213309938 26.11856122321093 24.01930066424364 31 23.831307181351047 25.711242010276976 26.030830931194387 24.42661987717759 32 23.731043990474998 25.328988595062036 26.550946233863893 24.389021180599073 33 24.570748214061915 25.42925178593809 25.79270585286377 24.20729414713623 34 24.044366461962653 25.836570998872038 26.149893470359693 23.969169068805616 35 23.768642687053514 25.73630780799599 26.09976187492167 24.395287630028825 36 25.13472866273969 25.579646572252162 25.053264820152904 24.232359944855244 37 24.833939090111542 24.98433387642562 25.836570998872038 24.3451560345908 38 24.313823787442036 25.911768392029078 25.673643313698456 24.10076450683043 39 24.295024439152776 25.303922797343027 25.491916280235614 24.90913648326858 40 24.3451560345908 25.805238751723277 26.19375861636797 23.655846597317957 41 23.89397167564858 26.250156661235746 26.356686301541547 23.49918536157413 42 24.49081907626747 25.844456978128722 25.762988030331517 23.901735915272294 43 24.056899360822158 25.078330617871913 26.11856122321093 24.746208798094997 44 24.16969545055771 25.69870911141747 25.178593808747962 24.95300162927685 45 23.787442035342774 25.69244266198772 26.149893470359693 24.370221832309813 46 24.414086978318082 25.63604461711994 25.79897230229352 24.150896102268455 47 24.232359944855244 26.037097380624136 26.00576513347537 23.724777541045245 48 23.850106529640307 25.67990976312821 26.07469607720266 24.395287630028825 49 24.545682416342903 25.203659606466978 25.460584033086853 24.790073944103273 50 23.46158666499561 25.535781426243894 26.362952750971303 24.639679157789196 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 2.0 10 3.0 11 3.0 12 3.0 13 7.5 14 12.0 15 16.5 16 21.0 17 21.5 18 22.0 19 29.0 20 36.0 21 59.0 22 82.0 23 98.0 24 114.0 25 142.0 26 170.0 27 197.0 28 224.0 29 286.5 30 349.0 31 391.5 32 434.0 33 509.0 34 584.0 35 649.5 36 715.0 37 762.5 38 810.0 39 855.0 40 900.0 41 890.0 42 880.0 43 926.0 44 972.0 45 1042.5 46 1113.0 47 1039.0 48 965.0 49 942.0 50 919.0 51 886.5 52 854.0 53 852.0 54 850.0 55 788.5 56 727.0 57 719.5 58 712.0 59 694.0 60 676.0 61 636.0 62 596.0 63 564.0 64 532.0 65 495.5 66 459.0 67 403.0 68 347.0 69 307.0 70 267.0 71 240.5 72 214.0 73 188.0 74 162.0 75 129.0 76 96.0 77 78.0 78 60.0 79 51.0 80 42.0 81 30.5 82 19.0 83 13.5 84 8.0 85 6.0 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03759869657851861 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.012532898859506203 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0062664494297531015 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 15958.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.57989723022935 #Duplication Level Percentage of deduplicated Percentage of total 1 92.51574127074986 81.02519112670761 2 5.659702346880366 9.913522997869407 3 0.751287922152261 1.973931570372227 4 0.2933600457927876 1.0276977064795088 5 0.1502575844304522 0.6579771901240757 6 0.12879221522610187 0.6767765384133351 7 0.10732684602175159 0.6579771901240757 8 0.07155123068116771 0.5013159543802482 9 0.10017172295363481 0.789572628148891 >10 0.2218088151116199 2.776037097380624 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTATGGTGACTGGAGGTGCTAACTTGGGAAGAATTGGTGTAATCACCA 33 0.20679283118185238 No Hit CATCAAAAGAGCCGGGATGTCTCTCTCTGTTGGTGATTACACCAATTCTT 22 0.13786188745456826 No Hit TTGTTACCCTTGCCAATAACAAAAATGTTGGACAGCCGAGTGGCAAAGCT 22 0.13786188745456826 No Hit GTATTACACCGGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAGATC 19 0.11906253916530894 No Hit CTTCAGCAATGGTGAGGCGGATTCCTTTTCCTCTGGGAAGAGAGATCCAT 19 0.11906253916530894 No Hit GTCTCCTAGAGACCATTTCACCCACTGCTCTGTTTGGCCGCAAGCCTCTT 17 0.10652964030580274 No Hit GCCTAGAAAGGCTTGTACAAACACTTTTCCAGCATGTCTCCTAGAGACCA 17 0.10652964030580274 No Hit GTTTGTTACCCTTGCCAATAACAAAAATGTTGGACAGCCGAGTGGCAAAG 17 0.10652964030580274 No Hit ATACACAGGTTCCCAGTGTCAAACTTGATGAAGTCAGTTATTTTGCCTGT 16 0.10026319087604962 No Hit GTTTAATCTAGCATGTATGTTGCCTAGAAAGGCTTGTACAAACACTTTTC 16 0.10026319087604962 No Hit CTCCTAGAGACCATTTCACCCACTGCTCTGTTTGGCCGCAAGCCTCTTGT 16 0.10026319087604962 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0062664494297531015 0.0 24 0.0 0.0 0.0 0.0062664494297531015 0.0 25 0.0 0.0 0.0 0.0062664494297531015 0.0 26 0.0 0.0 0.0 0.0062664494297531015 0.0 27 0.0 0.0 0.0 0.0062664494297531015 0.0 28 0.0 0.0 0.0 0.012532898859506203 0.0 29 0.0 0.0 0.0 0.03133224714876551 0.0 30 0.0 0.0 0.0 0.03133224714876551 0.0 31 0.0 0.0 0.0 0.08773029201654342 0.0 32 0.0 0.0 0.0 0.11279608973555584 0.0 33 0.0 0.0 0.0 0.15666123574382754 0.0 34 0.0 0.0 0.0 0.17546058403308684 0.0 35 0.0 0.0 0.0 0.21305928061160545 0.0 36 0.0 0.0 0.0 0.3195889209174082 0.0 37 0.0 0.0 0.0 0.45745080837197644 0.0 38 0.0 0.0 0.0 0.6454442912645695 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE