##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062008_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1596104 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296464390791577 32.0 32.0 32.0 32.0 32.0 2 31.434239874093418 32.0 32.0 32.0 32.0 32.0 3 31.575844681800184 32.0 32.0 32.0 32.0 32.0 4 31.653135384661653 32.0 32.0 32.0 32.0 32.0 5 31.62815330329352 32.0 32.0 32.0 32.0 32.0 6 35.26973179692551 36.0 36.0 36.0 36.0 36.0 7 35.282931438051655 36.0 36.0 36.0 36.0 36.0 8 35.23269598973501 36.0 36.0 36.0 36.0 36.0 9 35.3235622490765 36.0 36.0 36.0 36.0 36.0 10 35.197626219845326 36.0 36.0 36.0 36.0 36.0 11 35.327055129239696 36.0 36.0 36.0 36.0 36.0 12 35.23592635567607 36.0 36.0 36.0 36.0 36.0 13 35.27989592156902 36.0 36.0 36.0 36.0 36.0 14 35.243043686376325 36.0 36.0 36.0 36.0 36.0 15 35.221226812287924 36.0 36.0 36.0 36.0 36.0 16 35.2305808393438 36.0 36.0 36.0 36.0 36.0 17 35.21463075087839 36.0 36.0 36.0 36.0 36.0 18 35.20999571456497 36.0 36.0 36.0 36.0 36.0 19 35.197509059560026 36.0 36.0 36.0 36.0 36.0 20 35.20167106905314 36.0 36.0 36.0 36.0 36.0 21 35.190486334223834 36.0 36.0 36.0 36.0 36.0 22 35.17519033847419 36.0 36.0 36.0 36.0 36.0 23 35.14205214697789 36.0 36.0 36.0 36.0 36.0 24 35.13125147233514 36.0 36.0 36.0 36.0 36.0 25 35.111410659956995 36.0 36.0 36.0 36.0 36.0 26 35.071452110890014 36.0 36.0 36.0 36.0 36.0 27 35.06108436542982 36.0 36.0 36.0 36.0 36.0 28 35.04142399242155 36.0 36.0 36.0 36.0 36.0 29 35.01764546671144 36.0 36.0 36.0 36.0 36.0 30 35.003299910281534 36.0 36.0 36.0 36.0 36.0 31 35.00142785181918 36.0 36.0 36.0 36.0 36.0 32 34.9777953065715 36.0 36.0 36.0 36.0 36.0 33 34.95717259025728 36.0 36.0 36.0 36.0 36.0 34 34.95058780630836 36.0 36.0 36.0 36.0 36.0 35 34.93276628590618 36.0 36.0 36.0 36.0 36.0 36 34.908762837509336 36.0 36.0 36.0 32.0 36.0 37 34.89688892453123 36.0 36.0 36.0 32.0 36.0 38 34.87610957681956 36.0 36.0 36.0 32.0 36.0 39 34.859781693423486 36.0 36.0 36.0 32.0 36.0 40 34.858464110108116 36.0 36.0 36.0 32.0 36.0 41 34.83102980758146 36.0 36.0 36.0 32.0 36.0 42 34.80512360096836 36.0 36.0 36.0 32.0 36.0 43 34.79509480585225 36.0 36.0 36.0 32.0 36.0 44 34.741918446417024 36.0 36.0 36.0 32.0 36.0 45 34.73524093668082 36.0 36.0 36.0 32.0 36.0 46 34.721838927789165 36.0 36.0 36.0 32.0 36.0 47 34.69287339672102 36.0 36.0 36.0 32.0 36.0 48 34.67975583044714 36.0 36.0 36.0 32.0 36.0 49 34.65649481487422 36.0 36.0 36.0 32.0 36.0 50 34.24488692466155 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 9.0 21 33.0 22 81.0 23 249.0 24 660.0 25 1527.0 26 3188.0 27 6346.0 28 11219.0 29 18633.0 30 28600.0 31 43167.0 32 66301.0 33 114768.0 34 264352.0 35 1036969.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.33901602275249 17.54380467358483 11.532107550360177 26.585071753302508 2 16.207832274565064 19.882809734360794 37.17438881429441 26.73496917677974 3 19.00124114952625 23.196840300206567 28.293134331724623 29.508784218542562 4 12.40715668099114 15.733445773862965 35.734535929072244 36.12486161607365 5 14.531383919844822 36.77391949396781 33.36975535428769 15.324941231899675 6 35.16483929578347 35.19716809723701 16.33168347847879 13.30630912850072 7 30.62394430438117 30.019472415331332 20.194611378707155 19.161971901580348 8 27.8653521324425 33.750933523128815 19.01987589781117 19.363838446617514 9 26.943858294948196 14.238733816844015 18.374554540305642 40.442853347902144 10 15.87729613940955 27.04693870007136 31.657731361948443 25.418033798570644 11 37.82241006851684 21.088726047926702 21.910790274317964 19.178073609238496 12 24.314079784274707 23.490323938790954 29.06471006901806 23.130886207916276 13 29.557159182609656 19.446602477031572 24.995238405517433 26.00099993484134 14 23.237771473538064 19.474169602983267 25.179374276362942 32.10868464711572 15 25.153185506708837 27.43900146857598 21.87695789246816 25.53085513224702 16 25.68130343118674 26.05603049943769 23.64815377530786 24.61451229406771 17 24.089533012886378 26.1063188864886 25.08345320856285 24.720694892062173 18 24.594042235395982 25.489849646200557 26.016570369562846 23.89953774884061 19 25.515818518091553 25.153624074621707 25.02142717517154 24.3091302321152 20 25.596593703539185 24.834988719399686 24.78311236806146 24.78530520899967 21 26.26902758216257 24.603910522121367 24.518577736789084 24.608484158926988 22 25.670194423421027 24.767872268974955 25.0291960924852 24.532737215118814 23 24.412098976130597 24.715651004760346 25.43032964058688 25.441920378522177 24 24.665949497866976 25.122063842224534 25.36390468964489 24.8480819702636 25 24.944004099996302 24.67184053119512 25.269986385556287 25.114168983252295 26 24.458099977632937 25.684215934244598 25.571127569314395 24.286556518808066 27 25.025765945596106 25.002897689930258 25.14994370649941 24.821392657974222 28 24.753459708988476 25.13677190731338 25.396845286726045 24.712923096972098 29 24.522836914980264 25.06284067414322 25.382056262138963 25.03226614873755 30 24.513811268551606 25.337512718596972 25.608487752555 24.540188260296425 31 25.06528429367657 25.081636693532218 24.85358023577529 24.99949877701592 32 24.84451113498883 25.052518803705293 24.87633881441894 25.22663124688693 33 24.539158524956424 24.83688385829978 25.393991110843793 25.2299665059 34 25.126558803480492 25.05181392597939 25.4242852560247 24.397342014515417 35 25.351325545173292 24.827422877542606 25.609329752934972 24.21192182434913 36 24.376309047724366 25.421855607062955 25.18734693187094 25.014488413341745 37 25.218300597902736 25.147502097327262 25.105524225304638 24.528673079465367 38 24.707788464912063 25.00613995078015 25.31301218466967 24.97305939963812 39 25.334050083547766 24.96220458331689 24.779132544281566 24.924612788853782 40 25.53168561176816 25.073632466075185 25.08741603768679 24.30726588446986 41 24.470439931607824 25.413181846375732 25.685660386106292 24.430717835910155 42 25.450553746907968 25.501931034137076 25.10726575089785 23.94024946805711 43 25.080292775717812 24.773093806272296 25.22101659488457 24.92559682312532 44 24.45811025447437 25.362413731528445 25.15934800928551 25.02012800471168 45 24.720846276551086 25.504331252811586 25.128346179437795 24.64647629119953 46 24.606800073430318 25.140047027983094 25.10740436985573 25.145748528730866 47 24.779805650057327 25.133607753948713 25.508335996090448 24.578250599903516 48 25.428419445365126 25.451852427349923 24.562526902504384 24.557201224780567 49 24.69391527181251 25.628162113223624 24.770040944960826 24.907881670003036 50 24.96845368549922 25.653826345527065 24.64465755175538 24.733062417218335 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 77.0 1 55.0 2 33.0 3 82.0 4 131.0 5 149.5 6 168.0 7 135.5 8 103.0 9 166.5 10 230.0 11 338.0 12 446.0 13 812.0 14 1178.0 15 1663.0 16 2148.0 17 2250.0 18 2352.0 19 2553.5 20 2755.0 21 3412.5 22 4070.0 23 4989.5 24 5909.0 25 7822.0 26 9735.0 27 12714.0 28 15693.0 29 18573.5 30 21454.0 31 24661.5 32 27869.0 33 31996.0 34 36123.0 35 41673.5 36 47224.0 37 54669.5 38 62115.0 39 66970.0 40 71825.0 41 77613.5 42 83402.0 43 86815.0 44 90228.0 45 97012.0 46 103796.0 47 109036.5 48 114277.0 49 119432.0 50 124587.0 51 121497.0 52 118407.0 53 117571.5 54 116736.0 55 116790.5 56 116845.0 57 113488.0 58 110131.0 59 100442.5 60 90754.0 61 79093.0 62 67432.0 63 57625.0 64 47818.0 65 40440.5 66 33063.0 67 28014.5 68 22966.0 69 20093.5 70 17221.0 71 13430.0 72 9639.0 73 8387.0 74 7135.0 75 5228.0 76 3321.0 77 2953.0 78 2585.0 79 2178.0 80 1771.0 81 1368.0 82 965.0 83 850.5 84 736.0 85 571.0 86 406.0 87 271.0 88 136.0 89 90.5 90 45.0 91 33.0 92 21.0 93 18.5 94 16.0 95 12.5 96 9.0 97 9.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031200974372597275 2 0.004197721451734975 3 1.8795767694335707E-4 4 6.265255898111902E-5 5 0.0 6 2.506102359244761E-4 7 0.0 8 0.0 9 0.0 10 6.265255898111902E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.638730308300712E-4 17 0.0 18 1.2530511796223805E-4 19 0.0 20 6.265255898111902E-5 21 0.0 22 0.0 23 1.2530511796223805E-4 24 8.144832667545472E-4 25 3.132627949055951E-4 26 4.385679128678332E-4 27 3.132627949055951E-4 28 0.0010024409436979044 29 2.506102359244761E-4 30 0.0010024409436979044 31 5.012204718489522E-4 32 5.638730308300712E-4 33 1.2530511796223805E-4 34 5.012204718489522E-4 35 3.7591535388671414E-4 36 6.265255898111902E-5 37 0.0015663139745279756 38 0.0 39 6.891781487923092E-4 40 6.265255898111902E-5 41 9.397883847167853E-4 42 0.004260374010716094 43 0.004385679128678332 44 0.004323026569697213 45 0.0018795767694335707 46 0.002067534446376928 47 8.771358257356664E-4 48 0.0039471112158104985 49 0.0036965009798860227 50 0.002380797241282523 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1596104.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.64275146505355 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97113382405942 37.361157590930155 2 16.449743821111763 17.31919551277174 3 5.899121013430741 9.31637884116928 4 2.575771142955779 5.42382720437912 5 1.2962675231977916 3.411954452796094 6 0.7682143517892633 2.426455031587764 7 0.48075515089381615 1.7715791746833238 8 0.30155481685310614 1.2699740221350246 9 0.20955369134267435 0.9928334602743253 >10 0.9057438514103339 8.322420492488272 >50 0.07392611377920018 2.6725119021622787 >100 0.06079511684521736 6.476579096657292 >500 0.0055048514068129955 1.9471403326168937 >1k 0.001914730924108868 1.287992885348531 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1861 0.1165964122638625 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8795767694335707E-4 2 0.0 0.0 0.0 0.0 1.8795767694335707E-4 3 0.0 0.0 0.0 0.0 1.8795767694335707E-4 4 0.0 0.0 0.0 0.0 1.8795767694335707E-4 5 0.0 0.0 0.0 0.0 1.8795767694335707E-4 6 0.0 0.0 0.0 0.0 2.506102359244761E-4 7 0.0 0.0 0.0 0.0 2.506102359244761E-4 8 0.0 0.0 0.0 0.0 2.506102359244761E-4 9 0.0 0.0 0.0 0.0 2.506102359244761E-4 10 0.0 0.0 0.0 0.0 3.1326279490559515E-4 11 0.0 0.0 0.0 0.0 3.7591535388671414E-4 12 0.0 0.0 0.0 0.0 9.397883847167853E-4 13 0.0 0.0 0.0 0.0 0.0011903986206412615 14 0.0 0.0 0.0 0.0 0.0012530511796223806 15 0.0 0.0 0.0 0.0 0.0014410088565657375 16 0.0 0.0 0.0 0.0 0.0014410088565657375 17 0.0 0.0 0.0 0.0 0.0014410088565657375 18 0.0 0.0 0.0 6.265255898111902E-5 0.0014410088565657375 19 0.0 0.0 0.0 6.265255898111902E-5 0.0014410088565657375 20 0.0 0.0 0.0 6.265255898111902E-5 0.0015663139745279756 21 0.0 0.0 0.0 6.265255898111902E-5 0.0017542716514713328 22 0.0 0.0 0.0 6.265255898111902E-5 0.0017542716514713328 23 0.0 0.0 0.0 2.506102359244761E-4 0.0018169242104524516 24 0.0 0.0 0.0 3.1326279490559515E-4 0.0018169242104524516 25 0.0 0.0 0.0 3.1326279490559515E-4 0.0018169242104524516 26 0.0 0.0 0.0 3.7591535388671414E-4 0.0018795767694335707 27 0.0 0.0 0.0 3.7591535388671414E-4 0.0019422293284146897 28 0.0 0.0 0.0 6.265255898111903E-4 0.0019422293284146897 29 0.0 0.0 0.0 9.397883847167853E-4 0.0019422293284146897 30 0.0 0.0 0.0 0.002318144682301404 0.0019422293284146897 31 0.0 0.0 0.0 0.004135068892753856 0.0020048818873958088 32 0.0 0.0 0.0 0.006139950780149664 0.002067534446376928 33 0.0 0.0 0.0 0.008144832667545473 0.002067534446376928 34 0.0 0.0 0.0 0.010087061995960163 0.002318144682301404 35 0.0 0.0 0.0 0.012530511796223805 0.002318144682301404 36 0.0 0.0 0.0 0.01735475883776997 0.002318144682301404 37 0.0 0.0 0.0 0.024685108238560897 0.002318144682301404 38 0.0 0.0 0.0 0.03364442417286092 0.002506102359244761 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1710 0.0 25.997095 1 GTTCGCA 60 2.8740687E-4 21.99917 9 ACGTAGT 55 0.0044852104 19.999245 6 TGCGCTA 80 8.993478E-5 19.249273 10 GTATTCG 70 8.106423E-4 18.863523 1 TCAACGC 2470 0.0 18.169355 4 AACGCAG 2460 0.0 18.153786 6 GATATAC 370 0.0 17.843872 1 ATCAACG 2545 0.0 17.633913 3 ATACCGT 465 0.0 17.504715 6 AATCACG 215 0.0 17.395239 34 CAACGCA 2555 0.0 17.39269 5 TAATACC 190 3.274181E-11 17.367765 4 ACCGTCG 470 0.0 17.318497 8 CGTCGTA 450 0.0 17.110466 10 GGTATCA 910 0.0 16.9288 1 TATCAAC 2695 0.0 16.652954 2 AATTCGT 80 0.0019888121 16.499893 32 TAGGACG 240 0.0 16.499378 4 GTAAACG 230 1.8189894E-12 16.260256 27 >>END_MODULE