##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062007_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1447255 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28007503860757 32.0 32.0 32.0 32.0 32.0 2 31.490999858352538 32.0 32.0 32.0 32.0 32.0 3 31.600715146950606 32.0 32.0 32.0 32.0 32.0 4 31.675980390463327 32.0 32.0 32.0 32.0 32.0 5 31.65489702920356 32.0 32.0 32.0 32.0 32.0 6 35.31803932271784 36.0 36.0 36.0 36.0 36.0 7 35.32284082625384 36.0 36.0 36.0 36.0 36.0 8 35.27539859941752 36.0 36.0 36.0 36.0 36.0 9 35.348458288276774 36.0 36.0 36.0 36.0 36.0 10 35.24463415223993 36.0 36.0 36.0 36.0 36.0 11 35.35447243229424 36.0 36.0 36.0 36.0 36.0 12 35.276133784302004 36.0 36.0 36.0 36.0 36.0 13 35.31274930817306 36.0 36.0 36.0 36.0 36.0 14 35.27397037840602 36.0 36.0 36.0 36.0 36.0 15 35.25654290363481 36.0 36.0 36.0 36.0 36.0 16 35.26547153058721 36.0 36.0 36.0 36.0 36.0 17 35.25188373852569 36.0 36.0 36.0 36.0 36.0 18 35.245406649139234 36.0 36.0 36.0 36.0 36.0 19 35.23739009366007 36.0 36.0 36.0 36.0 36.0 20 35.234686354512505 36.0 36.0 36.0 36.0 36.0 21 35.22751691996228 36.0 36.0 36.0 36.0 36.0 22 35.21338948561242 36.0 36.0 36.0 36.0 36.0 23 35.18503719109625 36.0 36.0 36.0 36.0 36.0 24 35.17128287689454 36.0 36.0 36.0 36.0 36.0 25 35.15874120317429 36.0 36.0 36.0 36.0 36.0 26 35.12133245350681 36.0 36.0 36.0 36.0 36.0 27 35.102751070129315 36.0 36.0 36.0 36.0 36.0 28 35.08285823852742 36.0 36.0 36.0 36.0 36.0 29 35.07168536298026 36.0 36.0 36.0 36.0 36.0 30 35.045346535337586 36.0 36.0 36.0 36.0 36.0 31 35.05386887590646 36.0 36.0 36.0 36.0 36.0 32 35.02307402634643 36.0 36.0 36.0 36.0 36.0 33 35.008593509782315 36.0 36.0 36.0 36.0 36.0 34 35.00393710852614 36.0 36.0 36.0 36.0 36.0 35 34.98437455735168 36.0 36.0 36.0 36.0 36.0 36 34.96177867756546 36.0 36.0 36.0 36.0 36.0 37 34.95410898563142 36.0 36.0 36.0 36.0 36.0 38 34.94397393686669 36.0 36.0 36.0 36.0 36.0 39 34.92313033985027 36.0 36.0 36.0 36.0 36.0 40 34.910384831975016 36.0 36.0 36.0 36.0 36.0 41 34.8891764063693 36.0 36.0 36.0 36.0 36.0 42 34.855689564036744 36.0 36.0 36.0 32.0 36.0 43 34.851975636636254 36.0 36.0 36.0 32.0 36.0 44 34.807909456177384 36.0 36.0 36.0 32.0 36.0 45 34.798281574428835 36.0 36.0 36.0 32.0 36.0 46 34.77739582865494 36.0 36.0 36.0 32.0 36.0 47 34.76014800432543 36.0 36.0 36.0 32.0 36.0 48 34.73547508904789 36.0 36.0 36.0 32.0 36.0 49 34.719516602119185 36.0 36.0 36.0 32.0 36.0 50 34.3252481421726 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 14.0 21 32.0 22 120.0 23 292.0 24 698.0 25 1679.0 26 3378.0 27 6218.0 28 10518.0 29 16680.0 30 24426.0 31 36273.0 32 54842.0 33 94161.0 34 219119.0 35 978805.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.03620137185892 17.66157772070147 12.06458961733375 26.237631290105863 2 16.475927632951855 19.155763838311525 37.11547577423095 27.25283275450567 3 19.407579483558116 22.15147497078941 27.707947975780257 30.732997569872218 4 12.988675787854644 15.328073253259797 34.57723010420431 37.10602085468125 5 15.218013172550462 35.79590838361253 32.74315737687701 16.242921066960005 6 36.01420345012002 34.16635918781361 15.864734179349306 13.954703182717063 7 31.799648299712214 29.523269914424205 19.10769007534954 19.569391710514044 8 28.634622094931437 33.035021471682604 18.272799195718793 20.05755723766717 9 26.775101830707097 14.90172775357487 18.52520806630483 39.797962349413204 10 17.036596867863647 26.284241546928495 30.057591785829036 26.621569799378825 11 37.693357424918204 21.31925610897872 21.28056216768987 19.706824298413203 12 24.84759078393234 23.439753187931636 27.79157784910054 23.921078179035486 13 29.37713118973505 19.35236015767781 24.925462340776157 26.345046311810982 14 23.64414011352526 19.48923997498713 24.410971114281864 32.45564879720575 15 25.40043047009684 27.04236641089511 21.72250225426756 25.83470086474049 16 26.333892785553836 25.878131544744548 22.896612815071908 24.891362854629715 17 24.32121498975647 26.148190885503936 24.45643649529627 25.074157629443327 18 24.965555458820635 25.181343426931278 25.567730336209127 24.28537077803896 19 25.779631094727606 24.87446925386335 24.939419798169638 24.406479853239407 20 25.761788548227955 24.204699665296715 24.867265686970892 25.16624609950444 21 26.767224849801867 23.979257283616224 24.47495431005593 24.778563556525977 22 26.027825089566107 24.194768717330394 24.945638467305347 24.831767725798148 23 24.732009723241394 24.41962502781129 25.394505732925943 25.453859516021378 24 24.80160526132137 24.93627529899996 25.033840251899996 25.22827918777868 25 25.025824786682076 24.320350346483995 25.14480882057249 25.509016046261436 26 24.85367085598835 25.267282592998725 25.194109383928563 24.684937167084357 27 25.412730756447914 24.549162515693546 24.96560720980673 25.07249951805181 28 25.07275958519436 24.494759651527882 25.330492968646357 25.10198779463141 29 24.665951745591283 24.840904725250578 25.36451992266691 25.128623606491225 30 24.711312567369614 25.194646361349882 25.44270473452917 24.651336336751335 31 25.4370878819056 24.536551761307145 24.849835791905885 25.17652456488137 32 25.20243635320903 24.67971905240647 24.55693403673877 25.560910557645734 33 24.76358676500462 24.58752921049104 25.02290544714335 25.625978577360986 34 25.321697432017388 24.722559069127893 25.111643156480074 24.84410034237465 35 25.61708284591568 24.334376919584898 25.474813318749383 24.573726915750044 36 24.604232437911598 24.97921922320316 25.036016558288782 25.380531780596456 37 25.517261870213286 24.57449925236796 24.980445483666795 24.92779339375195 38 24.86610859869201 24.397911909096877 25.326290114734444 25.409689377476674 39 25.60492354805566 24.599844256240633 24.507945764688728 25.287286431014984 40 25.49144794210277 24.78770139864875 25.017308641054026 24.703542018194458 41 24.81822333913517 25.050734396366053 25.43083642484365 24.700205839655123 42 25.86757545982087 25.069824778156903 24.728336352969954 24.334263409052276 43 25.55443231451609 24.093819725110748 25.033841187229694 25.317906773143466 44 24.68039942039681 24.8332466139717 24.921693452930043 25.564660512701447 45 25.17965528297089 24.88329316425468 24.985074791876265 24.951976760898166 46 25.09587333525886 24.716249476583414 24.873239903760446 25.31463728439728 47 24.896458228824205 24.767937912249643 25.26778520800253 25.067818650923616 48 25.462716640386283 25.171812876326516 24.45229247367701 24.91317800961019 49 24.89712972054524 25.169515709872297 24.57499286558767 25.358361703994785 50 25.074521260497583 25.170358987257107 24.78825182865569 24.966867923589625 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 57.0 1 61.5 2 66.0 3 158.0 4 250.0 5 253.0 6 256.0 7 203.5 8 151.0 9 197.0 10 243.0 11 458.5 12 674.0 13 1223.0 14 1772.0 15 2212.5 16 2653.0 17 2570.0 18 2487.0 19 2447.5 20 2408.0 21 2842.5 22 3277.0 23 4003.0 24 4729.0 25 6055.0 26 7381.0 27 9078.5 28 10776.0 29 12927.5 30 15079.0 31 17684.5 32 20290.0 33 23710.5 34 27131.0 35 31547.0 36 35963.0 37 42354.5 38 48746.0 39 54640.0 40 60534.0 41 66128.0 42 71722.0 43 75763.5 44 79805.0 45 86490.0 46 93175.0 47 99392.0 48 105609.0 49 110264.5 50 114920.0 51 114305.5 52 113691.0 53 112953.0 54 112215.0 55 111726.0 56 111237.0 57 105321.5 58 99406.0 59 93125.5 60 86845.0 61 76191.5 62 65538.0 63 56106.0 64 46674.0 65 40120.0 66 33566.0 67 28507.5 68 23449.0 69 20414.0 70 17379.0 71 13497.0 72 9615.0 73 8451.5 74 7288.0 75 5337.0 76 3386.0 77 2980.0 78 2574.0 79 2195.5 80 1817.0 81 1487.0 82 1157.0 83 929.5 84 702.0 85 524.0 86 346.0 87 227.5 88 109.0 89 77.0 90 45.0 91 31.5 92 18.0 93 15.0 94 12.0 95 12.0 96 12.0 97 13.0 98 14.0 99 10.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03171521259211404 2 0.005320416927217388 3 4.1457794238057566E-4 4 1.3819264746019186E-4 5 2.0728897119028783E-4 6 6.909632373009593E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.1457794238057566E-4 17 0.0 18 6.909632373009593E-5 19 0.0 20 2.0728897119028783E-4 21 0.0 22 0.0 23 6.909632373009593E-5 24 9.673485322213431E-4 25 1.3819264746019186E-4 26 2.763852949203837E-4 27 2.763852949203837E-4 28 0.0015892154457922065 29 6.218669135708635E-4 30 0.0010364448559514391 31 4.1457794238057566E-4 32 6.909632373009594E-4 33 6.909632373009593E-5 34 6.909632373009594E-4 35 1.3819264746019186E-4 36 2.763852949203837E-4 37 0.001312830150871823 38 0.0 39 4.1457794238057566E-4 40 6.909632373009593E-5 41 8.291558847611513E-4 42 0.0042148757475358525 43 0.0037312014814251805 44 0.004007586776345565 45 0.002694756625473742 46 0.002280178683093166 47 8.982522084912473E-4 48 0.0028329492729339332 49 0.0030402382441242215 50 0.001174637503411631 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1447255.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.778913579020525 #Duplication Level Percentage of deduplicated Percentage of total 1 70.79120405899864 35.23909229007701 2 15.84169818164232 15.77165049457799 3 5.891746692022782 8.798542482350463 4 2.6584452869435604 5.293380727732718 5 1.4232772073395497 3.542459655157256 6 0.8163806140398214 2.4383124020325586 7 0.5377769903909113 1.8738968030618444 8 0.3569304796299652 1.4214089199374709 9 0.258380969194756 1.1575731542408394 >10 1.2534599575626182 11.111368125802832 >50 0.09294123786979408 3.2462923269938453 >100 0.06952186725005227 6.871246713791034 >500 0.006282043562476936 2.0397246415900274 >1k 0.001954413552770602 1.195051262654119 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1855 0.12817368051932798 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1464 0.10115701794086046 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0728897119028783E-4 2 0.0 0.0 0.0 0.0 2.0728897119028783E-4 3 0.0 0.0 0.0 0.0 2.0728897119028783E-4 4 0.0 0.0 0.0 0.0 2.0728897119028783E-4 5 0.0 0.0 0.0 0.0 2.7638529492038377E-4 6 0.0 0.0 0.0 0.0 2.7638529492038377E-4 7 0.0 0.0 0.0 0.0 2.7638529492038377E-4 8 0.0 0.0 0.0 0.0 2.7638529492038377E-4 9 0.0 0.0 0.0 0.0 2.7638529492038377E-4 10 0.0 0.0 0.0 6.909632373009594E-5 2.7638529492038377E-4 11 0.0 0.0 0.0 6.909632373009594E-5 2.7638529492038377E-4 12 0.0 0.0 0.0 6.909632373009594E-5 6.909632373009594E-4 13 0.0 0.0 0.0 1.3819264746019189E-4 8.291558847611513E-4 14 0.0 0.0 0.0 1.3819264746019189E-4 8.982522084912473E-4 15 0.0 0.0 0.0 2.0728897119028783E-4 0.001105541179681535 16 0.0 0.0 0.0 4.1457794238057566E-4 0.001174637503411631 17 0.0 0.0 0.0 4.836742661106716E-4 0.001174637503411631 18 0.0 0.0 0.0 7.600595610310554E-4 0.001243733827141727 19 0.0 0.0 0.0 9.673485322213432E-4 0.001243733827141727 20 0.0 0.0 0.0 0.001174637503411631 0.0013819264746019189 21 0.0 0.0 0.0 0.0017965044169824945 0.0014510227983320148 22 0.0 0.0 0.0 0.0020728897119028783 0.0014510227983320148 23 0.0 0.0 0.0 0.002694756625473742 0.0015201191220621108 24 0.0 0.0 0.0 0.003938490452615469 0.0015201191220621108 25 0.0 0.0 0.0 0.004836742661106716 0.0015892154457922067 26 0.0 0.0 0.0 0.006011380164518347 0.0015892154457922067 27 0.0 0.0 0.0 0.00732421031539017 0.0017274080932523986 28 0.0 0.0 0.0 0.009466196351023144 0.0017274080932523986 29 0.0 0.0 0.0 0.012230049300226982 0.0017274080932523986 30 0.0 0.0 0.0 0.016583117695223026 0.0017274080932523986 31 0.0 0.0 0.0 0.025980217722516075 0.0017965044169824945 32 0.0 0.0 0.0 0.03662105157695085 0.0017965044169824945 33 0.0 0.0 0.0 0.046432729546624474 0.0017965044169824945 34 0.0 0.0 0.0 0.05776452663836021 0.0018656007407125905 35 0.0 0.0 0.0 0.07034005755723767 0.0018656007407125905 36 0.0 0.0 0.0 0.08485028554055782 0.0018656007407125905 37 0.0 0.0 0.0 0.11083050326307389 0.0018656007407125905 38 0.0 0.0 0.0 0.14330577541621897 0.0018656007407125905 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 665 0.0 32.10447 1 TAACGTT 40 7.0330326E-4 27.499847 5 GTATCAA 1710 0.0 26.900824 1 ACGACGT 110 7.2759576E-12 25.998959 6 CGACGTT 140 7.2759576E-12 21.999119 7 ACCGTTA 95 6.8708687E-7 20.84127 8 CGCTCGA 65 4.9329933E-4 20.30758 10 TCGCGTG 165 8.185452E-11 18.666565 25 ATACCGT 365 0.0 18.081467 6 ATTCTAT 185 2.1827873E-11 17.845755 1 GTGTAGG 210 0.0 17.817429 1 CTCGCGT 180 2.8558134E-10 17.111017 24 TACCGTC 365 0.0 16.876036 7 CGCAATA 250 0.0 16.719908 36 ATCAACG 2755 0.0 16.529856 3 ACCGTCG 375 0.0 16.426008 8 TCAACGC 2785 0.0 16.351795 4 CACGACG 175 3.6270649E-9 16.342768 5 TATCAAC 2850 0.0 16.135475 2 GCGCAAT 260 0.0 16.076279 35 >>END_MODULE