##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062006_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2851286 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30246422140746 32.0 32.0 32.0 32.0 32.0 2 31.484904706157153 32.0 32.0 32.0 32.0 32.0 3 31.592730087406174 32.0 32.0 32.0 32.0 32.0 4 31.668265828121065 32.0 32.0 32.0 32.0 32.0 5 31.647459076360633 32.0 32.0 32.0 32.0 32.0 6 35.303760829324034 36.0 36.0 36.0 36.0 36.0 7 35.30866914087187 36.0 36.0 36.0 36.0 36.0 8 35.26481349117556 36.0 36.0 36.0 36.0 36.0 9 35.3422140044878 36.0 36.0 36.0 36.0 36.0 10 35.22695478461298 36.0 36.0 36.0 36.0 36.0 11 35.338994053911115 36.0 36.0 36.0 36.0 36.0 12 35.26319492327322 36.0 36.0 36.0 36.0 36.0 13 35.301631614646865 36.0 36.0 36.0 36.0 36.0 14 35.26685748115061 36.0 36.0 36.0 36.0 36.0 15 35.246434065190236 36.0 36.0 36.0 36.0 36.0 16 35.25294200581772 36.0 36.0 36.0 36.0 36.0 17 35.236897315807674 36.0 36.0 36.0 36.0 36.0 18 35.23583077951493 36.0 36.0 36.0 36.0 36.0 19 35.22615163824324 36.0 36.0 36.0 36.0 36.0 20 35.226619848026466 36.0 36.0 36.0 36.0 36.0 21 35.21372391264854 36.0 36.0 36.0 36.0 36.0 22 35.19954224164114 36.0 36.0 36.0 36.0 36.0 23 35.17072822579005 36.0 36.0 36.0 36.0 36.0 24 35.15558348057684 36.0 36.0 36.0 36.0 36.0 25 35.14320134844417 36.0 36.0 36.0 36.0 36.0 26 35.10283780722102 36.0 36.0 36.0 36.0 36.0 27 35.086487290296375 36.0 36.0 36.0 36.0 36.0 28 35.070001395861375 36.0 36.0 36.0 36.0 36.0 29 35.0535239186809 36.0 36.0 36.0 36.0 36.0 30 35.036781297982735 36.0 36.0 36.0 36.0 36.0 31 35.037342799003675 36.0 36.0 36.0 36.0 36.0 32 35.01359316462817 36.0 36.0 36.0 36.0 36.0 33 34.99897309494733 36.0 36.0 36.0 36.0 36.0 34 34.98656360673745 36.0 36.0 36.0 36.0 36.0 35 34.974658452361496 36.0 36.0 36.0 36.0 36.0 36 34.95353640427513 36.0 36.0 36.0 36.0 36.0 37 34.94041635949533 36.0 36.0 36.0 36.0 36.0 38 34.92506679442189 36.0 36.0 36.0 36.0 36.0 39 34.91125793764638 36.0 36.0 36.0 36.0 36.0 40 34.90131575717062 36.0 36.0 36.0 36.0 36.0 41 34.874514166590096 36.0 36.0 36.0 32.0 36.0 42 34.84579133766307 36.0 36.0 36.0 32.0 36.0 43 34.84716475302723 36.0 36.0 36.0 32.0 36.0 44 34.798956681301 36.0 36.0 36.0 32.0 36.0 45 34.795044411539216 36.0 36.0 36.0 32.0 36.0 46 34.77243531515253 36.0 36.0 36.0 32.0 36.0 47 34.748683927182334 36.0 36.0 36.0 32.0 36.0 48 34.723481264243574 36.0 36.0 36.0 32.0 36.0 49 34.70857676150341 36.0 36.0 36.0 32.0 36.0 50 34.321598394548985 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 3.0 20 26.0 21 65.0 22 206.0 23 524.0 24 1346.0 25 3106.0 26 6633.0 27 12433.0 28 20873.0 29 33339.0 30 49029.0 31 72531.0 32 110271.0 33 187693.0 34 439372.0 35 1913834.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.542424614521025 17.30941814163173 11.786061360885505 26.36209588296174 2 16.606720536930265 19.136733643825643 36.75398634455808 27.502559474686016 3 19.32319472180545 22.147542259997095 27.80595227824155 30.723310739955906 4 13.077432428735666 15.282577756142315 34.105557983309986 37.53443183181203 5 15.332244935178348 35.780393752290635 32.69024317106147 16.19711814146955 6 36.391725821385485 33.6986195673522 15.869539294632586 14.040115316629725 7 32.009416102067625 29.34139191929536 19.172506721528464 19.476685257108546 8 28.90471176865457 33.04031935063687 18.151458675138166 19.9035102055704 9 27.011075002647928 14.449024054409133 18.233737338169515 40.306163604773424 10 17.191652184892074 26.139231960326658 30.05771082161201 26.611405033169255 11 37.95897710717199 20.85076698724716 21.260862642330515 19.929393263250336 12 25.064444604995778 23.0890903262598 27.710864501140886 24.13560056760353 13 29.890898352532858 18.952886522081617 24.726982842128077 26.42923228325745 14 23.879996605040674 19.019137329611972 24.234012301817494 32.86685376352986 15 25.61584492050254 26.86636836851863 21.410198766451348 26.107587944527488 16 26.48454690780332 25.410220133175553 22.954370572593163 25.150862386427963 17 24.663011707699614 25.875447078967174 24.31944743529762 25.142093778035594 18 25.500397891333755 24.720993826985136 25.193974217202726 24.584634064478387 19 26.09331368372026 24.674795864041698 24.529142288777766 24.702748163460278 20 26.429612815862637 23.95886197036488 24.213379329066008 25.39814588470648 21 26.911515334314178 23.907325995121496 23.996759355869372 25.184399314694954 22 26.59280759629164 23.808520085322904 24.432168502212686 25.166503816172774 23 24.94106168234263 24.083834452243654 25.124592902991843 25.85051096242187 24 25.333528802950845 24.399834037877383 24.83280157881465 25.43383558035713 25 25.46876364520178 23.98605957961994 24.80632362271361 25.73885315246467 26 25.107671393920178 24.941219134784944 25.060499398863946 24.89061007243093 27 25.67406710123264 24.39446366782007 24.550358892200467 25.381110338746822 28 25.332354580294165 24.237570438478322 24.991416036562246 25.438658944665267 29 25.127092354888504 24.53493579885195 25.011494865626688 25.32647698063286 30 25.120359533664015 24.55211733524501 25.094476140105616 25.233046990985354 31 25.768367861209967 24.360434346647512 24.2144643564221 25.65673343572042 32 25.62960739125601 24.411444620467925 24.149805998118026 25.80914199015804 33 25.05885955039826 24.366012585930736 24.82415786038476 25.750970003286245 34 25.82967618209895 24.358258077209992 24.91636162640907 24.895704114281987 35 25.932766265781964 24.17586926840149 25.078552522255816 24.812811943560728 36 24.903762655701783 24.64335366101728 24.763054118775962 25.689829564504972 37 25.918380159109557 24.380945433272437 24.52688178454099 25.173792623077023 38 25.299952372368118 24.251969111481625 24.800493531690613 25.64758498445964 39 25.995319280419153 24.22295179939052 24.300566308849632 25.481162611340697 40 26.022837430434848 24.288741493306173 24.61396339333437 25.074457682924606 41 25.106286418135433 24.77618651135744 25.035650930220974 25.08187614028615 42 26.1169886656182 24.691773278693354 24.605422096643174 24.585815959045267 43 25.721633068787153 24.006969765415768 24.691635580035157 25.579761585761922 44 25.12450261210847 24.57928305996363 24.580650931467886 25.715563396460016 45 25.34989322140959 24.787047821867567 24.487317214658813 25.37574174206403 46 25.32305287952313 24.449186247648388 24.638893448315045 25.588867424513438 47 25.594553977108326 24.38343817020926 24.79606348783255 25.225944364849866 48 25.959558512770677 24.94573301379323 23.964104699070315 25.130603774365778 49 25.438938606816226 24.957351230851895 24.179116412901813 25.424593749430063 50 25.460366806382723 25.058193590971566 24.252514415561688 25.228925187084023 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 38.0 1 43.0 2 48.0 3 153.5 4 259.0 5 283.0 6 307.0 7 276.5 8 246.0 9 288.5 10 331.0 11 600.0 12 869.0 13 1660.0 14 2451.0 15 3167.0 16 3883.0 17 3839.5 18 3796.0 19 3769.0 20 3742.0 21 4439.0 22 5136.0 23 6163.5 24 7191.0 25 9399.0 26 11607.0 27 14857.5 28 18108.0 29 21716.5 30 25325.0 31 30347.0 32 35369.0 33 42073.5 34 48778.0 35 57676.5 36 66575.0 37 78636.5 38 90698.0 39 101427.5 40 112157.0 41 123066.5 42 133976.0 43 142398.0 44 150820.0 45 165521.5 46 180223.0 47 193925.0 48 207627.0 49 219304.5 50 230982.0 51 227023.0 52 223064.0 53 224184.5 54 225305.0 55 226750.0 56 228195.0 57 220593.0 58 212991.0 59 196045.0 60 179099.0 61 157506.0 62 135913.0 63 116540.5 64 97168.0 65 82328.0 66 67488.0 67 58229.5 68 48971.0 69 42577.5 70 36184.0 71 28226.5 72 20269.0 73 17573.5 74 14878.0 75 11189.5 76 7501.0 77 6386.0 78 5271.0 79 4522.0 80 3773.0 81 2907.0 82 2041.0 83 1715.0 84 1389.0 85 1080.5 86 772.0 87 519.0 88 266.0 89 169.0 90 72.0 91 55.5 92 39.0 93 37.0 94 35.0 95 28.5 96 22.0 97 23.5 98 25.0 99 19.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03282729266723858 2 0.004033267795654312 3 2.805751510020391E-4 4 0.0 5 3.5071893875254885E-5 6 2.1043136325152933E-4 7 0.0 8 0.0 9 0.0 10 3.5071893875254885E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.2086272650305865E-4 17 0.0 18 1.7535946937627443E-4 19 0.0 20 2.4550325712678416E-4 21 3.5071893875254885E-5 22 0.0 23 0.0 24 0.0011573724978834112 25 3.1564704487729395E-4 26 6.312940897545879E-4 27 4.2086272650305865E-4 28 0.0013678038611349406 29 4.559346203783135E-4 30 0.0012976600733844309 31 5.260784081288232E-4 32 8.767973468813722E-4 33 2.4550325712678416E-4 34 8.066535591308624E-4 35 3.1564704487729395E-4 36 7.014378775050977E-5 37 0.00150809143663596 38 0.0 39 5.260784081288232E-4 40 7.014378775050977E-5 41 9.820130285071367E-4 42 0.004839921354785174 43 0.003998195901779057 44 0.004945137036410939 45 0.0020692417386400383 46 0.0017535946937627443 47 0.0010872287101329015 48 0.0036825488569017626 49 0.0031564704487729396 50 9.469411346318819E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2851286.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.78057032362725 #Duplication Level Percentage of deduplicated Percentage of total 1 71.28700486890187 34.061337492993246 2 15.619282446781222 14.925964467060538 3 5.447908238024731 7.809124880508267 4 2.5782910302439896 4.927688635414012 5 1.3253086600626216 3.166200181631715 6 0.8356367267888425 2.395631963360399 7 0.5492297781315987 1.836975842649293 8 0.3933490491932983 1.5035553525369842 9 0.2738504424505551 1.1776257291298668 >10 1.5155809340117 12.806529598494276 >50 0.09365273264614539 3.0827791597739793 >100 0.06954876929031596 6.67593418300705 >500 0.007595463102146735 2.6047471462736946 >1k 0.0037608603709268318 3.0259053671667417 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3460 0.1213487528083819 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2897 0.1016032765566134 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7535946937627443E-4 2 0.0 0.0 0.0 0.0 1.7535946937627443E-4 3 0.0 0.0 0.0 0.0 1.7535946937627443E-4 4 0.0 0.0 0.0 0.0 2.104313632515293E-4 5 0.0 3.5071893875254885E-5 0.0 0.0 2.455032571267842E-4 6 0.0 3.5071893875254885E-5 0.0 0.0 3.8579083262780373E-4 7 0.0 3.5071893875254885E-5 0.0 0.0 3.8579083262780373E-4 8 0.0 3.5071893875254885E-5 0.0 0.0 3.8579083262780373E-4 9 0.0 3.5071893875254885E-5 0.0 0.0 3.8579083262780373E-4 10 0.0 3.5071893875254885E-5 0.0 7.014378775050977E-5 3.8579083262780373E-4 11 0.0 3.5071893875254885E-5 0.0 7.014378775050977E-5 3.8579083262780373E-4 12 0.0 3.5071893875254885E-5 0.0 1.0521568162576465E-4 0.001227516285633921 13 0.0 3.5071893875254885E-5 0.0 1.0521568162576465E-4 0.0014379476488854503 14 0.0 3.5071893875254885E-5 0.0 1.0521568162576465E-4 0.0014379476488854503 15 0.0 3.5071893875254885E-5 0.0 1.4028757550101954E-4 0.0015782352243864698 16 0.0 3.5071893875254885E-5 0.0 1.7535946937627443E-4 0.0015782352243864698 17 0.0 3.5071893875254885E-5 0.0 2.104313632515293E-4 0.0015782352243864698 18 0.0 3.5071893875254885E-5 0.0 2.455032571267842E-4 0.0015782352243864698 19 0.0 3.5071893875254885E-5 0.0 4.208627265030586E-4 0.0015782352243864698 20 0.0 3.5071893875254885E-5 0.0 6.663659836298429E-4 0.0017535946937627443 21 0.0 3.5071893875254885E-5 0.0 7.715816652556075E-4 0.0017535946937627443 22 0.0 3.5071893875254885E-5 0.0 9.469411346318819E-4 0.001823738481513254 23 0.0 3.5071893875254885E-5 0.0 0.0011223006040081563 0.001823738481513254 24 0.0 3.5071893875254885E-5 0.0 0.0017185227998874895 0.001858810375388509 25 0.0 3.5071893875254885E-5 0.0 0.002455032571267842 0.001858810375388509 26 0.0 3.5071893875254885E-5 0.0 0.0032266142365234493 0.001858810375388509 27 0.0 3.5071893875254885E-5 0.0 0.0039280521140285475 0.001858810375388509 28 0.0 3.5071893875254885E-5 0.0 0.004874993248660429 0.0018938822692637638 29 0.0 7.014378775050977E-5 0.0 0.006137581428169605 0.0018938822692637638 30 0.0 7.014378775050977E-5 0.0 0.008697829681063212 0.0018938822692637638 31 0.0 7.014378775050977E-5 0.0 0.013467607248097875 0.0018938822692637638 32 0.0 7.014378775050977E-5 0.0 0.019184325949764422 0.0019990979508895286 33 0.0 7.014378775050977E-5 0.0 0.02339295321479501 0.002104313632515293 34 0.0 7.014378775050977E-5 0.0 0.02865373729608324 0.0022796731018915675 35 0.0 1.0521568162576465E-4 0.0 0.034510743573250804 0.0022796731018915675 36 0.0 1.0521568162576465E-4 0.0 0.04334886082981504 0.0022796731018915675 37 0.0 1.7535946937627443E-4 0.0 0.057903696788045814 0.0022796731018915675 38 0.0 1.7535946937627443E-4 0.0 0.07494863721141969 0.0023498168896420773 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3220 0.0 26.654535 1 GGTATCA 1585 0.0 23.742653 1 GTCCTAA 475 0.0 19.45889 1 CGAGCCG 850 0.0 17.599178 15 TCAACGC 4815 0.0 17.498665 4 ATCAACG 4865 0.0 17.40926 3 TAGGACG 495 0.0 17.332525 4 CGGATCG 245 0.0 17.061327 26 AACGCAG 4985 0.0 16.946049 6 ACCGTCG 710 0.0 16.731615 8 CGTCGTA 755 0.0 16.608498 10 CAACGCA 5085 0.0 16.52627 5 TATCAAC 5205 0.0 16.526226 2 ATACCGT 835 0.0 16.071108 6 GTAGGAC 955 0.0 15.894548 3 TACCGTC 780 0.0 15.794135 7 GTCGATA 85 0.0029814986 15.529233 36 TCTAGAT 770 0.0 15.428392 2 CGTCTTA 200 1.2805685E-9 15.3992815 15 CGCAATA 415 0.0 15.373315 36 >>END_MODULE