##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062005_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1175978 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.307939434241117 32.0 32.0 32.0 32.0 32.0 2 31.439401077231036 32.0 32.0 32.0 32.0 32.0 3 31.565464660053163 32.0 32.0 32.0 32.0 32.0 4 31.641327473813284 32.0 32.0 32.0 32.0 32.0 5 31.61159052295196 32.0 32.0 32.0 32.0 32.0 6 35.25946658866067 36.0 36.0 36.0 36.0 36.0 7 35.26553983152746 36.0 36.0 36.0 36.0 36.0 8 35.219198828549516 36.0 36.0 36.0 36.0 36.0 9 35.30208643358974 36.0 36.0 36.0 36.0 36.0 10 35.18599072431627 36.0 36.0 36.0 36.0 36.0 11 35.31161382270757 36.0 36.0 36.0 36.0 36.0 12 35.2405810312778 36.0 36.0 36.0 36.0 36.0 13 35.26920486607742 36.0 36.0 36.0 36.0 36.0 14 35.233239057193245 36.0 36.0 36.0 36.0 36.0 15 35.20455569747053 36.0 36.0 36.0 36.0 36.0 16 35.22668111138133 36.0 36.0 36.0 36.0 36.0 17 35.210465671976856 36.0 36.0 36.0 36.0 36.0 18 35.19999523800615 36.0 36.0 36.0 36.0 36.0 19 35.189199968026614 36.0 36.0 36.0 36.0 36.0 20 35.1950861325637 36.0 36.0 36.0 36.0 36.0 21 35.1852619691865 36.0 36.0 36.0 36.0 36.0 22 35.165914668471686 36.0 36.0 36.0 36.0 36.0 23 35.14318465141355 36.0 36.0 36.0 36.0 36.0 24 35.123106894856875 36.0 36.0 36.0 36.0 36.0 25 35.113974070943506 36.0 36.0 36.0 36.0 36.0 26 35.072111893249705 36.0 36.0 36.0 36.0 36.0 27 35.05420679638565 36.0 36.0 36.0 36.0 36.0 28 35.04195656721469 36.0 36.0 36.0 36.0 36.0 29 35.024360149594635 36.0 36.0 36.0 36.0 36.0 30 35.00761748944283 36.0 36.0 36.0 36.0 36.0 31 35.00570673941179 36.0 36.0 36.0 36.0 36.0 32 34.97167123874766 36.0 36.0 36.0 36.0 36.0 33 34.95452210840679 36.0 36.0 36.0 36.0 36.0 34 34.943435166304134 36.0 36.0 36.0 36.0 36.0 35 34.931686647199186 36.0 36.0 36.0 36.0 36.0 36 34.91122452971059 36.0 36.0 36.0 36.0 36.0 37 34.911968591249156 36.0 36.0 36.0 36.0 36.0 38 34.895087323062164 36.0 36.0 36.0 32.0 36.0 39 34.87088193826755 36.0 36.0 36.0 32.0 36.0 40 34.861998268675094 36.0 36.0 36.0 32.0 36.0 41 34.84360081566152 36.0 36.0 36.0 32.0 36.0 42 34.814461665099174 36.0 36.0 36.0 32.0 36.0 43 34.80179731253476 36.0 36.0 36.0 32.0 36.0 44 34.775920127757495 36.0 36.0 36.0 32.0 36.0 45 34.7599861562036 36.0 36.0 36.0 32.0 36.0 46 34.74584388483458 36.0 36.0 36.0 32.0 36.0 47 34.714738711098335 36.0 36.0 36.0 32.0 36.0 48 34.70298423950108 36.0 36.0 36.0 32.0 36.0 49 34.685945655445934 36.0 36.0 36.0 32.0 36.0 50 34.26337737610738 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 10.0 21 25.0 22 61.0 23 181.0 24 479.0 25 1153.0 26 2542.0 27 4794.0 28 8395.0 29 13823.0 30 20816.0 31 31566.0 32 48676.0 33 83852.0 34 193280.0 35 766324.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.634264871132025 17.763781885243322 12.268976329191558 26.332976914433093 2 16.102296683513153 19.48154327743634 37.47062920471158 26.94553083433894 3 18.88149827460998 22.656607418921975 28.60890535950869 29.852988946959353 4 12.977963873473824 15.878103161793844 34.88271039084064 36.261222573891686 5 14.676222409111741 36.27970615071553 33.53330889974889 15.510762540423833 6 35.201003422691805 34.6446140436659 16.28002295967176 13.874359573970535 7 30.936548132703162 30.177520327761233 19.74169584805158 19.144235691484024 8 28.17093517055591 33.7166171475997 18.634192136247446 19.47825554559694 9 26.960878519836257 14.902829814843473 18.38954470236688 39.74674696295339 10 16.274893131413286 26.99780692989744 31.675704541840528 25.051595396848747 11 36.72755782846278 21.64700360040749 21.984254807487897 19.641183763641838 12 24.353091639469447 23.52824627671606 28.68837682337595 23.430285260438545 13 29.33889919709382 19.95751621203798 24.85522688349612 25.848357707372077 14 23.53071230924388 19.1687259455534 25.23839731695661 32.062164428246106 15 25.05029856000707 26.93621819455806 22.2181027196087 25.79538052582616 16 25.4454821666824 26.297882689483515 23.511254084915215 24.74538105891887 17 24.150281722957402 26.22897707270034 24.999957482197797 24.620783722144463 18 24.52800987773581 25.881606628695437 25.387974945109516 24.20240854845924 19 25.454642858965048 25.42003336797117 25.179212536288944 23.946111236774836 20 25.74778248214038 24.80176057865077 25.089266201634896 24.36119073757395 21 25.99191990999824 24.68492155884001 24.881353972058978 24.441804559102774 22 25.678626640974578 24.6099842003847 25.018835386376274 24.692553772264446 23 24.940730082926862 24.70135444941053 25.076192031129885 25.281723436532715 24 24.754520337799743 25.11465071605144 25.200537772021736 24.930291174127078 25 25.11792322468892 24.741810426564463 25.126937006421045 25.013329342325573 26 24.78290373272924 25.1786601087097 25.308169554480703 24.730266604080356 27 25.0276154299461 25.235613402688667 25.02591471062686 24.710856456738377 28 25.216439632879606 24.843808861333223 25.20674545032454 24.733006055462628 29 24.723250684113765 25.353621763746474 25.138906132278432 24.784221419861325 30 25.014179795555837 25.380515982989348 24.910860745478836 24.694443475975984 31 25.109016201066016 25.082229849010012 24.894725384618003 24.914028565305976 32 24.898870977479927 25.428730081387922 24.784412567295337 24.887986373836814 33 24.8533772344187 25.172175986435107 25.060439107227438 24.914007671918753 34 25.118583360403278 25.054295787463243 25.15319320456544 24.673927647568043 35 25.121686156860346 24.963264556419517 25.315907807642336 24.599141479077804 36 24.8326490766787 25.251706673288137 25.180616545291894 24.73502770474127 37 25.400203917980413 24.72144106574782 25.139906612708053 24.738448403563716 38 25.06586007561366 25.05676126594205 25.040179323082572 24.837199335361714 39 25.298881177990236 25.15278889154391 24.686790213007313 24.861539717458538 40 25.202172149478987 25.159654347275207 24.909564634712556 24.728608868533257 41 24.954930593113396 25.044559187186 25.217608702307214 24.78290151739339 42 25.174501073198606 25.10349308288631 25.074324531177183 24.647681312737898 43 25.00110550610069 24.76784371885449 25.185980141708875 25.045070633335943 44 24.81246741937651 25.076939168946428 25.07124154604572 25.039351865631343 45 24.895021046813216 25.221140354606913 25.06586164377737 24.8179769548025 46 25.208575512796855 25.06265131344535 24.737978473629475 24.990794700128323 47 24.97531822692605 25.14292468593985 25.228471158678502 24.6532859284556 48 25.05678489092454 25.315303900150433 24.711355872675984 24.91655533624904 49 24.98420411262829 25.03854366595546 24.931735404642588 25.04551681677366 50 24.93390489618243 25.337150933239904 24.831009977405635 24.89793419317203 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 6.5 2 8.0 3 34.5 4 61.0 5 72.0 6 83.0 7 86.5 8 90.0 9 106.5 10 123.0 11 199.0 12 275.0 13 504.0 14 733.0 15 1015.5 16 1298.0 17 1320.5 18 1343.0 19 1475.0 20 1607.0 21 2001.0 22 2395.0 23 3177.0 24 3959.0 25 5222.5 26 6486.0 27 8234.0 28 9982.0 29 12202.0 30 14422.0 31 17119.0 32 19816.0 33 23102.0 34 26388.0 35 29973.0 36 33558.0 37 38102.5 38 42647.0 39 47344.5 40 52042.0 41 56966.0 42 61890.0 43 64934.5 44 67979.0 45 72870.5 46 77762.0 47 81121.0 48 84480.0 49 87159.0 50 89838.0 51 91278.5 52 92719.0 53 93497.5 54 94276.0 55 91156.5 56 88037.0 57 84015.0 58 79993.0 59 74025.5 60 68058.0 61 59406.0 62 50754.0 63 43178.0 64 35602.0 65 29589.5 66 23577.0 67 19910.0 68 16243.0 69 13246.0 70 10249.0 71 8177.0 72 6105.0 73 5410.0 74 4715.0 75 3629.5 76 2544.0 77 2099.5 78 1655.0 79 1377.5 80 1100.0 81 841.0 82 582.0 83 433.0 84 284.0 85 203.5 86 123.0 87 83.0 88 43.0 89 27.5 90 12.0 91 12.0 92 12.0 93 9.5 94 7.0 95 8.5 96 10.0 97 8.0 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.033589063740988356 2 0.005527314286491754 3 0.0010204272528907853 4 0.0 5 8.503560440756545E-5 6 2.5510681322269633E-4 7 0.0 8 0.0 9 0.0 10 8.503560440756545E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.2517802203782725E-4 17 0.0 18 0.0 19 0.0 20 8.503560440756545E-5 21 8.503560440756545E-5 22 0.0 23 1.700712088151309E-4 24 0.0012755340661134817 25 8.503560440756545E-5 26 1.700712088151309E-4 27 4.2517802203782725E-4 28 0.0012755340661134817 29 3.401424176302618E-4 30 7.65320439668089E-4 31 5.102136264453927E-4 32 4.2517802203782725E-4 33 8.503560440756545E-5 34 0.0010204272528907853 35 1.700712088151309E-4 36 5.102136264453927E-4 37 0.0012755340661134817 38 0.0 39 7.65320439668089E-4 40 0.0 41 0.0011904984617059165 42 0.004591922638008534 43 0.00391163780274801 44 0.004166744615970708 45 0.002380996923411833 46 0.002125890110189136 47 7.65320439668089E-4 48 0.004166744615970708 49 0.003316388571895052 50 0.0017857476925588745 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1175978.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.77969405076401 #Duplication Level Percentage of deduplicated Percentage of total 1 60.02020694012923 25.67646089762271 2 17.00470277823233 14.549119645539113 3 8.18262646025052 10.5015076950361 4 4.6283236261995935 7.919930747869648 5 2.8049836392164273 5.999817095153868 6 1.8279850958336494 4.692038587747202 7 1.2374161544688276 3.7055399151154558 8 0.901601261963046 3.0856180914049474 9 0.6665892305150659 2.5664835005071844 >10 2.6414815776351177 17.850168090400942 >50 0.06272877921538204 1.806559002175128 >100 0.021354456340840277 1.646756731427741 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5510681322269633E-4 2 0.0 0.0 0.0 0.0 2.5510681322269633E-4 3 0.0 0.0 0.0 0.0 2.5510681322269633E-4 4 0.0 0.0 0.0 0.0 2.5510681322269633E-4 5 0.0 0.0 0.0 0.0 2.5510681322269633E-4 6 0.0 0.0 0.0 0.0 2.5510681322269633E-4 7 0.0 0.0 0.0 0.0 2.5510681322269633E-4 8 0.0 0.0 0.0 0.0 2.5510681322269633E-4 9 0.0 0.0 0.0 0.0 2.5510681322269633E-4 10 0.0 0.0 0.0 0.0 2.5510681322269633E-4 11 0.0 0.0 0.0 0.0 2.5510681322269633E-4 12 0.0 0.0 0.0 0.0 6.802848352605236E-4 13 0.0 0.0 0.0 0.0 6.802848352605236E-4 14 0.0 0.0 0.0 0.0 6.802848352605236E-4 15 0.0 0.0 0.0 0.0 6.802848352605236E-4 16 0.0 0.0 0.0 0.0 6.802848352605236E-4 17 0.0 0.0 0.0 0.0 6.802848352605236E-4 18 0.0 0.0 0.0 0.0 6.802848352605236E-4 19 0.0 0.0 0.0 0.0 6.802848352605236E-4 20 0.0 0.0 0.0 0.0 6.802848352605236E-4 21 0.0 0.0 0.0 0.0 6.802848352605236E-4 22 0.0 0.0 0.0 0.0 6.802848352605236E-4 23 0.0 0.0 0.0 0.0 6.802848352605236E-4 24 0.0 0.0 0.0 0.0 6.802848352605236E-4 25 0.0 0.0 0.0 1.700712088151309E-4 6.802848352605236E-4 26 0.0 0.0 0.0 4.2517802203782725E-4 6.802848352605236E-4 27 0.0 0.0 0.0 4.2517802203782725E-4 8.503560440756545E-4 28 0.0 0.0 0.0 5.952492308529581E-4 9.3539164848322E-4 29 0.0 0.0 0.0 7.65320439668089E-4 9.3539164848322E-4 30 0.0 0.0 0.0 9.3539164848322E-4 9.3539164848322E-4 31 0.0 0.0 0.0 0.0027211393410420943 0.0010204272528907853 32 0.0 0.0 0.0 0.00391163780274801 0.0010204272528907853 33 0.0 0.0 0.0 0.005272207473269058 0.0010204272528907853 34 0.0 0.0 0.0 0.00748313318786576 0.0010204272528907853 35 0.0 0.0 0.0 0.009949165715685158 0.0010204272528907853 36 0.0 0.0 0.0 0.013860803518433168 0.0010204272528907853 37 0.0 0.0 0.0 0.019473153409332488 0.0011054628572983508 38 0.0 0.0 0.0 0.030357710773500864 0.0011904984617059162 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGAT 25 0.0023534477 35.197926 7 GGTATCA 640 0.0 25.44682 1 GTATCAA 1140 0.0 24.131645 1 GTATATA 140 4.0618033E-9 18.864052 1 CGGTATT 60 0.0074145063 18.332253 31 ACGGACC 160 1.1023076E-9 17.873945 8 ATAATAC 150 9.596988E-9 17.59971 3 TTTATAC 150 9.596988E-9 17.59971 3 TTATACA 240 0.0 17.41564 4 TAGAGTG 230 0.0 17.216377 5 TAATACT 230 0.0 17.216377 4 ATAGCGT 95 3.3477196E-4 16.20957 6 ATCAACG 1645 0.0 15.64716 3 TATCAAC 1690 0.0 15.4928465 2 TTAGAGT 185 7.570634E-9 15.458549 4 CGACCAT 200 1.2769306E-9 15.399746 10 TCAACGC 1660 0.0 15.372587 4 GTCCTAC 130 1.3641407E-5 15.23635 1 ATTATAC 130 1.3690929E-5 15.230519 3 TATAGTA 145 2.282688E-6 15.174101 2 >>END_MODULE