##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062003_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1556555 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29641419673574 32.0 32.0 32.0 32.0 32.0 2 31.48716299777393 32.0 32.0 32.0 32.0 32.0 3 31.596263543530423 32.0 32.0 32.0 32.0 32.0 4 31.66656173408585 32.0 32.0 32.0 32.0 32.0 5 31.644513685671242 32.0 32.0 32.0 32.0 32.0 6 35.2959760496738 36.0 36.0 36.0 36.0 36.0 7 35.30427771585328 36.0 36.0 36.0 36.0 36.0 8 35.25878237518109 36.0 36.0 36.0 36.0 36.0 9 35.33385264253432 36.0 36.0 36.0 36.0 36.0 10 35.22929353604595 36.0 36.0 36.0 36.0 36.0 11 35.337051373064234 36.0 36.0 36.0 36.0 36.0 12 35.26996219214869 36.0 36.0 36.0 36.0 36.0 13 35.29747422995011 36.0 36.0 36.0 36.0 36.0 14 35.26168044174475 36.0 36.0 36.0 36.0 36.0 15 35.240153415716115 36.0 36.0 36.0 36.0 36.0 16 35.2528622502899 36.0 36.0 36.0 36.0 36.0 17 35.23275759610165 36.0 36.0 36.0 36.0 36.0 18 35.23214213439294 36.0 36.0 36.0 36.0 36.0 19 35.22306054074543 36.0 36.0 36.0 36.0 36.0 20 35.22176601533515 36.0 36.0 36.0 36.0 36.0 21 35.21682047855681 36.0 36.0 36.0 36.0 36.0 22 35.20117952786763 36.0 36.0 36.0 36.0 36.0 23 35.16873865684155 36.0 36.0 36.0 36.0 36.0 24 35.161164237691565 36.0 36.0 36.0 36.0 36.0 25 35.14437973601961 36.0 36.0 36.0 36.0 36.0 26 35.09826122430624 36.0 36.0 36.0 36.0 36.0 27 35.08576054170909 36.0 36.0 36.0 36.0 36.0 28 35.07120789178667 36.0 36.0 36.0 36.0 36.0 29 35.050465932781044 36.0 36.0 36.0 36.0 36.0 30 35.03891928007684 36.0 36.0 36.0 36.0 36.0 31 35.03549183935036 36.0 36.0 36.0 36.0 36.0 32 35.00953323204127 36.0 36.0 36.0 36.0 36.0 33 34.9841341937805 36.0 36.0 36.0 36.0 36.0 34 34.98236747175654 36.0 36.0 36.0 36.0 36.0 35 34.971205000786995 36.0 36.0 36.0 36.0 36.0 36 34.951342548127116 36.0 36.0 36.0 36.0 36.0 37 34.93619884938213 36.0 36.0 36.0 36.0 36.0 38 34.928275582937964 36.0 36.0 36.0 36.0 36.0 39 34.90782400878864 36.0 36.0 36.0 36.0 36.0 40 34.895300198194086 36.0 36.0 36.0 36.0 36.0 41 34.86286446672299 36.0 36.0 36.0 32.0 36.0 42 34.84090828785362 36.0 36.0 36.0 32.0 36.0 43 34.83845543524 36.0 36.0 36.0 32.0 36.0 44 34.79675565591964 36.0 36.0 36.0 32.0 36.0 45 34.78373973293588 36.0 36.0 36.0 32.0 36.0 46 34.76426660156564 36.0 36.0 36.0 32.0 36.0 47 34.74230913780753 36.0 36.0 36.0 32.0 36.0 48 34.715019385758936 36.0 36.0 36.0 32.0 36.0 49 34.703374439065755 36.0 36.0 36.0 32.0 36.0 50 34.29977675058061 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 15.0 21 30.0 22 93.0 23 259.0 24 766.0 25 1623.0 26 3426.0 27 6643.0 28 11274.0 29 18018.0 30 26937.0 31 40119.0 32 61272.0 33 104054.0 34 241563.0 35 1040459.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.14001498654938 17.68354988425911 12.07136990685461 26.105065222336897 2 16.621179179580487 19.184154935006863 37.16976598358339 27.024899901829265 3 19.196017865127537 22.361218899207994 27.973109796524625 30.469653439139844 4 13.10015585710486 15.225170472723724 34.09351683269581 37.5811568374756 5 15.00223249419391 36.13704623350926 32.7466103028804 16.114110969416437 6 36.03177795009608 34.01051427161719 15.85396173976953 14.10374603851721 7 31.801703120031092 29.636151629720764 19.151780695189053 19.41036455505909 8 28.69554882416619 33.315880261217885 18.031421954251535 19.957148960364393 9 26.943731509647904 14.751936166727164 18.42299179919759 39.88134052442734 10 16.734669490855755 26.726555408007307 30.26797031646208 26.270804784674855 11 37.58453764884633 21.357292225459428 21.21396288598861 19.844207239705632 12 24.87666674161851 23.383176309221327 27.945944730510647 23.79421221864952 13 29.82779278599214 19.31907320974845 24.7909646623473 26.062169341912107 14 23.617475771816608 19.322735142670833 24.55242506689452 32.50736401861804 15 25.384519017959533 26.997054392552783 21.782590399953744 25.83583618953394 16 26.0823169262694 25.915408806041583 23.008393589648872 24.99388067804015 17 24.458628188531726 25.984240839546306 24.62534250315601 24.931788468765962 18 25.039542476521852 25.21011156696138 25.52298217729677 24.227363779219996 19 25.830311167931747 24.901208116642202 25.050383699901385 24.218097015524666 20 26.125114997764285 24.380232719497968 24.763965482682234 24.73068680005551 21 26.621288679166494 24.063396410663294 24.474689297840424 24.84062561232979 22 26.210124280863827 24.115498649260708 24.830731968995636 24.843645100879826 23 24.9787029553745 24.258972062646077 25.3411703031183 25.421154678861125 24 24.801722803178603 24.70188553663816 25.201842813483555 25.294548846699684 25 25.214079076111222 24.3506316208078 25.076788360933882 25.358500942147096 26 24.958385558841307 25.054688217732668 25.23470159345887 24.752224629967152 27 25.360814675046754 24.707830858946117 24.968086411781975 24.963268054225153 28 25.196190231445048 24.534524019851915 25.149612116734392 25.11967363196865 29 24.843291152414732 24.811233054661304 25.302255181173223 25.043220611750737 30 24.92129940148998 24.95907568877479 25.343841308755614 24.775783600979615 31 25.35304196543237 24.595915435680222 24.768477324429842 25.282565274457564 32 25.271387353609516 24.60497295602616 24.75382884720524 25.369810843159087 33 24.82909351625033 24.63436837679154 25.012190397628608 25.524347709329525 34 25.48966070192999 24.65890627720382 25.006279966361223 24.84515305450497 35 25.551717292549093 24.41747738105257 25.362259716847973 24.668545609550357 36 24.82197786383716 24.867977087760863 25.044136126865347 25.265908921536628 37 25.70463231784216 24.55482450927421 24.783796685043118 24.956746487840512 38 25.008319659966826 24.554753641698266 25.081044409638213 25.355882288696698 39 25.621218370511993 24.5258387524108 24.63075106422073 25.222191812856483 40 25.566090222375838 24.678616996262257 24.907648562144328 24.847644219217578 41 24.88419754196835 24.920239250126887 25.302756773078578 24.892806434826184 42 25.595096596786316 24.888112202612323 24.86286275996325 24.653928440638108 43 25.42470886193059 24.286048373314625 24.953581097837553 25.335661666917233 44 24.998586557908723 24.8860251695488 24.901316043081714 25.21407222946076 45 25.223736570987292 24.956987326841066 24.807294229812953 25.011981872358685 46 25.110182536806754 24.64722314308696 24.99620946374834 25.24638485635795 47 25.18009553270566 24.55363997597227 25.283337669888567 24.982926821433505 48 25.368089468371963 25.13660605351938 24.51173575297642 24.983568725132237 49 25.197220696367822 24.954947141191322 24.640139286414115 25.207692876026737 50 25.108944604166332 25.241162204269123 24.56510496137229 25.084788230192256 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 66.0 1 66.0 2 66.0 3 164.5 4 263.0 5 272.5 6 282.0 7 220.5 8 159.0 9 221.5 10 284.0 11 512.0 12 740.0 13 1335.5 14 1931.0 15 2416.0 16 2901.0 17 2806.5 18 2712.0 19 2680.5 20 2649.0 21 3099.5 22 3550.0 23 4284.5 24 5019.0 25 6394.5 26 7770.0 27 9803.5 28 11837.0 29 13980.5 30 16124.0 31 19112.0 32 22100.0 33 25704.0 34 29308.0 35 34116.5 36 38925.0 37 44675.0 38 50425.0 39 56481.0 40 62537.0 41 68478.0 42 74419.0 43 79858.5 44 85298.0 45 93570.0 46 101842.0 47 108166.0 48 114490.0 49 119940.0 50 125390.0 51 124368.5 52 123347.0 53 122945.0 54 122543.0 55 120561.5 56 118580.0 57 113628.0 58 108676.0 59 100802.0 60 92928.0 61 81360.0 62 69792.0 63 60715.0 64 51638.0 65 43634.0 66 35630.0 67 30916.0 68 26202.0 69 22265.5 70 18329.0 71 14270.5 72 10212.0 73 8635.5 74 7059.0 75 5468.0 76 3877.0 77 3284.5 78 2692.0 79 2234.0 80 1776.0 81 1384.5 82 993.0 83 810.0 84 627.0 85 492.5 86 358.0 87 237.0 88 116.0 89 81.5 90 47.0 91 30.0 92 13.0 93 10.0 94 7.0 95 7.5 96 8.0 97 8.5 98 9.0 99 9.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03167250755675193 2 0.005332288290487648 3 1.927333117043728E-4 4 6.424443723479094E-5 5 0.0 6 2.5697774893916375E-4 7 0.0 8 0.0 9 0.0 10 1.2848887446958188E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.424443723479093E-4 17 0.0 18 6.424443723479094E-5 19 0.0 20 1.927333117043728E-4 21 0.0 22 0.0 23 6.424443723479094E-5 24 0.0014133776191654005 25 2.5697774893916375E-4 26 2.5697774893916375E-4 27 5.139554978783275E-4 28 0.0019273331170437278 29 3.854666234087456E-4 30 0.0014776220564001914 31 7.709332468174912E-4 32 0.001027910995756655 33 1.2848887446958188E-4 34 0.0011563998702262368 35 3.854666234087456E-4 36 4.497110606435365E-4 37 0.002184310865982892 38 6.424443723479094E-5 39 0.001092155432991446 40 6.424443723479094E-5 41 0.0016061109308697734 42 0.005460777164957229 43 0.004946821667078902 44 0.0045613550436701565 45 0.0023770441776872647 46 0.0030194885500351735 47 0.0012848887446958186 48 0.004625599480904947 49 0.003212221861739547 50 0.0019273331170437278 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1556555.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.099951917896796 #Duplication Level Percentage of deduplicated Percentage of total 1 74.90116083355682 42.019515213571914 2 14.509923184561933 16.280119859726007 3 4.696965549143452 7.9049862440089615 4 1.9767206094500172 4.435757245810464 5 1.0741345645317102 3.012944871178997 6 0.6363277505363184 2.141877372546653 7 0.41967785990304424 1.6480735433096625 8 0.30128934012750247 1.3521853995622193 9 0.2198972969274265 1.110260500605369 >10 1.1493053868487184 11.27343197362342 >50 0.06822970012559558 2.6314573507227537 >100 0.04267709272721041 4.579922351227914 >500 0.0031141391290018484 1.242203428748138 >1k 5.766924312966386E-4 0.3672646453575597 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.424443723479094E-5 7 0.0 0.0 0.0 0.0 6.424443723479094E-5 8 0.0 0.0 0.0 0.0 6.424443723479094E-5 9 0.0 0.0 0.0 0.0 6.424443723479094E-5 10 0.0 0.0 0.0 0.0 6.424443723479094E-5 11 0.0 0.0 0.0 0.0 6.424443723479094E-5 12 0.0 0.0 0.0 0.0 1.2848887446958188E-4 13 0.0 0.0 0.0 6.424443723479094E-5 1.927333117043728E-4 14 0.0 0.0 0.0 1.2848887446958188E-4 1.927333117043728E-4 15 0.0 0.0 0.0 1.2848887446958188E-4 3.854666234087456E-4 16 0.0 0.0 0.0 1.2848887446958188E-4 3.854666234087456E-4 17 0.0 0.0 0.0 1.2848887446958188E-4 3.854666234087456E-4 18 0.0 0.0 0.0 1.927333117043728E-4 3.854666234087456E-4 19 0.0 0.0 0.0 3.854666234087456E-4 3.854666234087456E-4 20 0.0 0.0 0.0 7.066888095827003E-4 4.497110606435365E-4 21 0.0 0.0 0.0 0.001027910995756655 4.497110606435365E-4 22 0.0 0.0 0.0 0.0012848887446958186 4.497110606435365E-4 23 0.0 0.0 0.0 0.0017345998053393552 4.497110606435365E-4 24 0.0 0.0 0.0 0.0021200664287481007 4.497110606435365E-4 25 0.0 0.0 0.0 0.0026982663638612193 4.497110606435365E-4 26 0.0 0.0 0.0 0.0030837329872699646 5.139554978783275E-4 27 0.0 0.0 0.0 0.0036619329223830832 5.781999351131184E-4 28 0.0 0.0 0.0 0.004497110606435365 5.781999351131184E-4 29 0.0 0.0 0.0 0.006745665909653048 5.781999351131184E-4 30 0.0 0.0 0.0 0.010086376645862176 5.781999351131184E-4 31 0.0 6.424443723479094E-5 0.0 0.01644657593210648 5.781999351131184E-4 32 0.0 6.424443723479094E-5 0.0 0.024477130586455346 5.781999351131184E-4 33 0.0 6.424443723479094E-5 0.0 0.03334286292485649 5.781999351131184E-4 34 0.0 1.2848887446958188E-4 0.0 0.042851039635605555 6.424443723479093E-4 35 0.0 1.2848887446958188E-4 0.0 0.0517167719740067 6.424443723479093E-4 36 0.0 1.2848887446958188E-4 0.0 0.065143859356078 6.424443723479093E-4 37 0.0 1.2848887446958188E-4 0.0 0.08602330145738506 6.424443723479093E-4 38 0.0 1.2848887446958188E-4 0.0 0.10960100992255332 6.424443723479093E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 945 0.0 33.531277 1 GTATCAA 2310 0.0 25.815271 1 ATACCGT 315 0.0 21.65005 6 TAGGACG 170 0.0 20.705172 4 CGCAATA 235 0.0 20.5957 36 ACCGTCG 310 0.0 19.870285 8 GTGTTAT 135 2.59206E-9 19.559912 1 TACCGTC 360 0.0 18.943794 7 TATGCGC 85 1.4315438E-4 18.117025 10 GTCCTAA 300 0.0 17.60392 1 TATCAAC 3350 0.0 17.599396 2 CGTCGTA 325 0.0 17.599396 10 TACACCG 90 2.2164677E-4 17.110523 5 TCAACGC 3440 0.0 16.819191 4 ATCAACG 3480 0.0 16.56265 3 CGCAACT 120 6.41101E-6 16.499434 15 CCGTCGT 365 0.0 16.273415 9 CAACGCA 3575 0.0 16.122522 5 ACGCAAC 110 5.6245637E-5 15.999451 14 AACGCAG 3635 0.0 15.856402 6 >>END_MODULE