##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062002_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 852016 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28419771459691 32.0 32.0 32.0 32.0 32.0 2 31.460204972676568 32.0 32.0 32.0 32.0 32.0 3 31.580559520009015 32.0 32.0 32.0 32.0 32.0 4 31.652472488779555 32.0 32.0 32.0 32.0 32.0 5 31.632207611124674 32.0 32.0 32.0 32.0 32.0 6 35.27527534694184 36.0 36.0 36.0 36.0 36.0 7 35.27541032093294 36.0 36.0 36.0 36.0 36.0 8 35.2307480141218 36.0 36.0 36.0 36.0 36.0 9 35.309664372500045 36.0 36.0 36.0 36.0 36.0 10 35.202433991849915 36.0 36.0 36.0 36.0 36.0 11 35.31625345063942 36.0 36.0 36.0 36.0 36.0 12 35.23666809074008 36.0 36.0 36.0 36.0 36.0 13 35.271581754333255 36.0 36.0 36.0 36.0 36.0 14 35.23758708756643 36.0 36.0 36.0 36.0 36.0 15 35.21592904358604 36.0 36.0 36.0 36.0 36.0 16 35.23125504685358 36.0 36.0 36.0 36.0 36.0 17 35.21004065651349 36.0 36.0 36.0 36.0 36.0 18 35.2077695724024 36.0 36.0 36.0 36.0 36.0 19 35.1979552027192 36.0 36.0 36.0 36.0 36.0 20 35.20043285572102 36.0 36.0 36.0 36.0 36.0 21 35.1921372368594 36.0 36.0 36.0 36.0 36.0 22 35.167291459315315 36.0 36.0 36.0 36.0 36.0 23 35.138147640419895 36.0 36.0 36.0 36.0 36.0 24 35.12202470376143 36.0 36.0 36.0 36.0 36.0 25 35.12012802576477 36.0 36.0 36.0 36.0 36.0 26 35.06946231056694 36.0 36.0 36.0 36.0 36.0 27 35.06293778520591 36.0 36.0 36.0 36.0 36.0 28 35.042165874819254 36.0 36.0 36.0 36.0 36.0 29 35.01588233084825 36.0 36.0 36.0 36.0 36.0 30 35.001497624457755 36.0 36.0 36.0 36.0 36.0 31 35.007808538806785 36.0 36.0 36.0 36.0 36.0 32 34.9807198456367 36.0 36.0 36.0 36.0 36.0 33 34.962396246079884 36.0 36.0 36.0 36.0 36.0 34 34.95404663762183 36.0 36.0 36.0 36.0 36.0 35 34.942381363730256 36.0 36.0 36.0 36.0 36.0 36 34.918738615237274 36.0 36.0 36.0 36.0 36.0 37 34.90583510168823 36.0 36.0 36.0 36.0 36.0 38 34.893615847589714 36.0 36.0 36.0 32.0 36.0 39 34.886449315505814 36.0 36.0 36.0 32.0 36.0 40 34.86678536553304 36.0 36.0 36.0 32.0 36.0 41 34.83755234643481 36.0 36.0 36.0 32.0 36.0 42 34.80974066214719 36.0 36.0 36.0 32.0 36.0 43 34.80496962498357 36.0 36.0 36.0 32.0 36.0 44 34.769486723254026 36.0 36.0 36.0 32.0 36.0 45 34.750167837223714 36.0 36.0 36.0 32.0 36.0 46 34.73499676062421 36.0 36.0 36.0 32.0 36.0 47 34.71121903814013 36.0 36.0 36.0 32.0 36.0 48 34.69745990685621 36.0 36.0 36.0 32.0 36.0 49 34.67196742784173 36.0 36.0 36.0 32.0 36.0 50 34.27674362922762 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 3.0 21 29.0 22 61.0 23 166.0 24 429.0 25 954.0 26 1893.0 27 3632.0 28 6440.0 29 10225.0 30 15265.0 31 22503.0 32 34754.0 33 58845.0 34 136191.0 35 560624.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.89929191092472 17.929998861140103 12.044323957502915 26.126385270432262 2 16.368438041022333 19.65221984213152 37.20977728219725 26.769564834648907 3 18.885297390177602 22.877494683173477 28.301009844931762 29.93619808171716 4 12.949052599951175 15.77892903419654 34.730568440029295 36.54144992582299 5 15.04267525492479 36.21598655424311 32.92344275224878 15.817895438583312 6 35.47891119415598 34.348885466939585 16.24312219488836 13.929081144016076 7 31.151058196090215 29.913405382058556 19.74387804923851 19.19165837261272 8 28.1921935738296 33.39796435747686 18.739436818087924 19.670405250605622 9 26.84010628908377 14.683761807290004 18.648593453644065 39.82753844998216 10 16.90695949371843 26.530839796435746 30.512689902537044 26.049510807308785 11 37.50504685358022 21.223897203808377 21.602528591012376 19.66852735159903 12 24.62770652194325 23.519041895926836 28.147828209798874 23.705423372331037 13 29.594984131753392 19.254098514581884 24.951409363204448 26.199507990460276 14 23.600026290586094 19.437545773788287 24.800238493173836 32.16218944245178 15 25.27100430038873 27.078247356857148 21.8382049163396 25.812543426414525 16 26.01254917794199 25.77640116055248 23.352597628191283 24.85845203331424 17 24.28827627650185 26.054675029576906 24.80587219019361 24.85117650372763 18 25.099000720645435 25.188318501808656 25.53209219566815 24.180588581877764 19 25.650252636397248 25.145214579555525 25.02937154862297 24.17516123542426 20 25.9123676371515 24.4749499421371 24.739382216724138 24.87330020398726 21 26.422860603556742 24.36362697414133 24.598833824716905 24.614678597585023 22 26.065707686240636 24.235460366941467 24.840261215751816 24.85857073106608 23 24.59543013276746 24.399893898706125 25.417245685527035 25.587430282999378 24 24.88201415712745 24.835183665900242 25.211470770848663 25.071331406123644 25 24.99322191849636 24.399567611216288 25.233124924443462 25.374085545843894 26 24.736593158053495 25.35736124853141 25.342924781310995 24.563120812104096 27 25.385615729319 24.755461764712784 24.826939463436045 25.031983042532165 28 25.07367949098651 24.661708143535044 25.303491427826962 24.961120937651483 29 24.74803729059836 24.948973663485567 25.36739549137276 24.93559355454331 30 24.776203839657843 24.97573365352 25.4162250602404 24.831837446581762 31 25.3625238112564 24.73272121434767 24.69739311489379 25.207361859502143 32 25.09301534019554 24.858980528397552 24.662034483163342 25.385969648243567 33 24.72776141125104 24.621542000680744 25.174469783218505 25.47622680484971 34 25.3575364637311 24.684775196564363 25.296269649100772 24.66141869060376 35 25.779358344630083 24.490413901163713 25.294742463454284 24.435485290751924 36 24.635364400861487 24.985710345475137 25.175613105403073 25.2033121482603 37 25.52681801216429 24.779049814437055 24.957335780901925 24.736796392496732 38 24.864820455038938 24.652382880583087 25.31223041847855 25.17056624589943 39 25.488608141669367 24.57911390919377 24.81878189509068 25.113496054046188 40 25.73358450262026 24.683485619384633 24.978433478283833 24.604496399711273 41 24.773445101590255 25.14797517843289 25.37356176811999 24.705017951856863 42 25.65086392568866 25.108130091797605 24.980662759702952 24.260343222810786 43 25.316289294814837 24.32672252810776 25.111474443918873 25.245513733158525 44 24.908243474341624 24.866928095983134 24.940403740450222 25.28442468922502 45 25.050293545290014 25.03221838548917 24.93808670912373 24.97940136009709 46 24.97030516431925 24.91349765258216 24.960680751173708 25.155516431924884 47 25.046214517520436 24.820746357122317 25.31827864859948 24.814760476757765 48 25.61743972318794 25.26086109396164 24.449580157420428 24.672119025429996 49 24.992429488609023 25.335626005000062 24.61073486778014 25.061209638610784 50 25.116725078110147 25.425292428891012 24.65358062539759 24.80440186760125 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 295.0 1 165.0 2 35.0 3 87.0 4 139.0 5 131.0 6 123.0 7 101.0 8 79.0 9 121.5 10 164.0 11 277.0 12 390.0 13 722.5 14 1055.0 15 1306.0 16 1557.0 17 1517.5 18 1478.0 19 1449.0 20 1420.0 21 1721.5 22 2023.0 23 2488.5 24 2954.0 25 3821.5 26 4689.0 27 5862.0 28 7035.0 29 8318.5 30 9602.0 31 11272.0 32 12942.0 33 14954.0 34 16966.0 35 19633.5 36 22301.0 37 25843.0 38 29385.0 39 33179.0 40 36973.0 41 39766.0 42 42559.0 43 44994.0 44 47429.0 45 51406.5 46 55384.0 47 59408.5 48 63433.0 49 65745.5 50 68058.0 51 66619.5 52 65181.0 53 64447.5 54 63714.0 55 63833.0 56 63952.0 57 61455.0 58 58958.0 59 53925.5 60 48893.0 61 43176.0 62 37459.0 63 32049.5 64 26640.0 65 22524.0 66 18408.0 67 15955.0 68 13502.0 69 11847.0 70 10192.0 71 7966.0 72 5740.0 73 5005.5 74 4271.0 75 3237.0 76 2203.0 77 1966.0 78 1729.0 79 1471.0 80 1213.0 81 935.5 82 658.0 83 543.5 84 429.0 85 341.5 86 254.0 87 168.5 88 83.0 89 58.0 90 33.0 91 23.5 92 14.0 93 11.0 94 8.0 95 7.0 96 6.0 97 4.5 98 3.0 99 4.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03368481343073369 2 0.004812116204390528 3 4.6947475164785637E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.389495032957127E-4 17 0.0 18 2.3473737582392818E-4 19 1.1736868791196409E-4 20 2.3473737582392818E-4 21 0.0 22 0.0 23 0.0 24 8.215808153837487E-4 25 5.868434395598205E-4 26 8.215808153837487E-4 27 2.3473737582392818E-4 28 0.0017605303186794615 29 5.868434395598205E-4 30 0.0015257929428555332 31 3.521060637358923E-4 32 7.042121274717846E-4 33 7.042121274717846E-4 34 5.868434395598205E-4 35 1.1736868791196409E-4 36 1.1736868791196409E-4 37 0.0016431616307674974 38 1.1736868791196409E-4 39 4.6947475164785637E-4 40 1.1736868791196409E-4 41 0.0017605303186794615 42 0.003873166701094815 43 0.0031689545736230305 44 0.003873166701094815 45 0.002112636382415354 46 0.0018778990065914255 47 0.001291055567031605 48 0.003521060637358923 49 0.0030515858857110664 50 0.0016431616307674974 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 852016.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.97048798669466 #Duplication Level Percentage of deduplicated Percentage of total 1 82.40295608717692 54.36163224617232 2 11.574312337718393 15.271260660594061 3 2.864958225783315 5.670080766492607 4 1.0972168895539682 2.8953573452447414 5 0.5583338901252475 1.841677959553607 6 0.3307361158782344 1.309129377558667 7 0.23033270081816185 1.063661247058724 8 0.16813837262611836 0.8873736393146986 9 0.11090133398440435 0.6584593609193904 >10 0.5592093200466745 6.730641152365309 >50 0.05575741305304878 2.5420305025214236 >100 0.0442790356679022 5.560397110498203 >500 0.0028682775676067357 1.2082986317063735 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 880 0.1032844453625284 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.1736868791196409E-4 0.0 0.0 0.0 6 0.0 1.1736868791196409E-4 0.0 0.0 0.0 7 0.0 1.1736868791196409E-4 0.0 0.0 0.0 8 0.0 1.1736868791196409E-4 0.0 0.0 0.0 9 0.0 1.1736868791196409E-4 0.0 0.0 0.0 10 0.0 1.1736868791196409E-4 0.0 0.0 0.0 11 0.0 1.1736868791196409E-4 0.0 0.0 0.0 12 0.0 1.1736868791196409E-4 0.0 0.0 0.0 13 0.0 1.1736868791196409E-4 0.0 0.0 0.0 14 0.0 1.1736868791196409E-4 0.0 0.0 0.0 15 0.0 1.1736868791196409E-4 0.0 0.0 0.0 16 0.0 1.1736868791196409E-4 0.0 0.0 0.0 17 0.0 1.1736868791196409E-4 0.0 0.0 0.0 18 0.0 1.1736868791196409E-4 0.0 2.3473737582392818E-4 0.0 19 0.0 1.1736868791196409E-4 0.0 2.3473737582392818E-4 0.0 20 0.0 1.1736868791196409E-4 0.0 2.3473737582392818E-4 0.0 21 0.0 1.1736868791196409E-4 0.0 3.521060637358923E-4 0.0 22 0.0 1.1736868791196409E-4 0.0 3.521060637358923E-4 0.0 23 0.0 1.1736868791196409E-4 0.0 5.868434395598205E-4 0.0 24 0.0 1.1736868791196409E-4 0.0 5.868434395598205E-4 0.0 25 0.0 1.1736868791196409E-4 0.0 5.868434395598205E-4 0.0 26 0.0 1.1736868791196409E-4 0.0 0.0010563181912076767 0.0 27 0.0 1.1736868791196409E-4 0.0 0.001291055567031605 2.3473737582392818E-4 28 0.0 1.1736868791196409E-4 0.0 0.002230005070327318 2.3473737582392818E-4 29 0.0 1.1736868791196409E-4 0.0 0.003521060637358923 2.3473737582392818E-4 30 0.0 1.1736868791196409E-4 0.0 0.006337909147246061 2.3473737582392818E-4 31 0.0 1.1736868791196409E-4 0.0 0.00974160109669302 2.3473737582392818E-4 32 0.0 1.1736868791196409E-4 0.0 0.015844772868115153 2.3473737582392818E-4 33 0.0 1.1736868791196409E-4 0.0 0.022769525454921034 2.3473737582392818E-4 34 0.0 1.1736868791196409E-4 0.0 0.02840322247469531 3.521060637358923E-4 35 0.0 1.1736868791196409E-4 0.0 0.03614955587688494 3.521060637358923E-4 36 0.0 1.1736868791196409E-4 0.0 0.048473268107641174 3.521060637358923E-4 37 0.0 1.1736868791196409E-4 0.0 0.06736962686146739 3.521060637358923E-4 38 0.0 1.1736868791196409E-4 0.0 0.08943494018891664 3.521060637358923E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 495 0.0 28.012556 1 GTATCAA 1040 0.0 24.761099 1 TAGCGGC 190 0.0 24.315271 30 CGCAATA 215 0.0 23.53438 36 CTAGCGG 205 0.0 22.536104 29 GCGCAAT 225 0.0 21.510653 35 TCTAGCG 220 0.0 20.999552 28 CAATACG 235 0.0 20.595304 38 CGACGGT 260 0.0 20.307259 7 ATACGAA 250 0.0 19.359589 40 GCAATAC 265 0.0 19.093933 37 TACGAAT 245 0.0 18.85674 41 GGCGTTA 175 9.094947E-12 18.856739 42 GACGGTA 280 0.0 18.856739 8 CACGTTT 70 8.1218034E-4 18.856739 28 AATACGA 260 0.0 18.614988 39 ACGGTAT 285 0.0 18.52592 9 GCCGGTC 250 0.0 18.479607 8 CGCCGGT 250 0.0 18.479607 7 TACGACG 290 0.0 18.206507 5 >>END_MODULE