##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062000_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1337774 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3103917403089 32.0 32.0 32.0 32.0 32.0 2 30.946517124716134 32.0 32.0 32.0 32.0 32.0 3 30.96460837181766 32.0 32.0 32.0 32.0 32.0 4 30.970002406983543 32.0 32.0 32.0 32.0 32.0 5 30.922410661292567 32.0 32.0 32.0 32.0 32.0 6 34.550708116617606 36.0 36.0 36.0 32.0 36.0 7 34.49367082930301 36.0 36.0 36.0 32.0 36.0 8 34.47574104445145 36.0 36.0 36.0 32.0 36.0 9 34.581404631873546 36.0 36.0 36.0 32.0 36.0 10 34.35069899699052 36.0 36.0 36.0 32.0 36.0 11 34.53120706487045 36.0 36.0 36.0 32.0 36.0 12 34.41105747308589 36.0 36.0 36.0 32.0 36.0 13 34.4819416433568 36.0 36.0 36.0 32.0 36.0 14 34.406343672399075 36.0 36.0 36.0 32.0 36.0 15 34.369293318602395 36.0 36.0 36.0 32.0 36.0 16 34.371529869768736 36.0 36.0 36.0 32.0 36.0 17 34.31031026167349 36.0 36.0 36.0 32.0 36.0 18 34.31576783522478 36.0 36.0 36.0 32.0 36.0 19 34.30648525087197 36.0 36.0 36.0 32.0 36.0 20 34.30261837948712 36.0 36.0 36.0 32.0 36.0 21 34.27684721036588 36.0 36.0 36.0 32.0 36.0 22 34.251894565150764 36.0 36.0 36.0 32.0 36.0 23 34.230719837580935 36.0 36.0 36.0 32.0 36.0 24 34.20409650658482 36.0 36.0 36.0 32.0 36.0 25 33.867390904592256 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 22.0 5 88.0 6 267.0 7 57.0 8 199.0 9 206.0 10 107.0 11 29.0 12 51.0 13 65.0 14 154.0 15 278.0 16 435.0 17 582.0 18 786.0 19 1033.0 20 1563.0 21 2126.0 22 3129.0 23 4455.0 24 6312.0 25 9177.0 26 12481.0 27 16880.0 28 22799.0 29 30860.0 30 41646.0 31 57759.0 32 83800.0 33 121718.0 34 278085.0 35 640625.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.338917801276466 17.295430115162834 11.64889314808807 25.716758935472633 2 16.861867137101296 19.25517839389432 37.36247635991239 26.520478109091993 3 19.408655039304392 22.66797432133022 28.06802993652094 29.855340702844448 4 12.87950827270471 15.337995233438892 35.13634338377994 36.64615311007646 5 15.112069900211988 36.16139561142122 33.03502862035316 15.691505868013625 6 35.131437820404464 34.7407070551436 16.351005473521706 13.77684965093023 7 31.14418717416665 29.87658459675796 19.876217934855404 19.103010294219985 8 28.43063890925962 32.962195249711904 18.781672328898335 19.825493512130148 9 26.802567543194638 14.509672441418658 18.626138380011064 40.06162163537564 10 16.588623805966687 26.342459457881557 30.397868890987993 26.671047845163763 11 37.45377731068534 21.203376838802207 21.790311424901418 19.552534425611036 12 24.771560305983442 23.57210221403871 28.113127048996272 23.543210430981574 13 29.29243863774828 19.27157165503315 25.149728834008688 26.286260873209876 14 23.61410871602063 19.761691656962906 24.59378919545116 32.0304104315653 15 25.22526231326694 27.343154705321414 21.732143311591784 25.699439669819863 16 25.95453895725333 25.80725793113564 23.381012572022144 24.857190539588885 17 24.13167015552813 26.223939252647703 24.755099887213852 24.88929070461031 18 24.884682964209066 25.01040173132702 25.842689902687688 24.262225401776227 19 25.656379583059607 24.921024947287613 25.01747103250435 24.40512443714843 20 25.949150209043488 24.358728800117316 24.464298005931628 25.227822984907565 21 26.931217683354298 24.159664337087445 24.12801637613639 24.78110160342187 22 26.128803677240303 24.139409489560677 24.870607443523337 24.861179389675684 23 24.37462314302087 24.381580502635565 25.43303952827606 25.810756826067504 24 24.90427017134854 24.879954271143983 25.11929754731126 25.096478010196215 25 24.770707408513022 24.630427252207262 25.050519560290912 25.5483457789888 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 160.0 1 160.0 2 256.0 3 352.0 4 352.0 5 352.0 6 794.0 7 1236.0 8 1236.0 9 1236.0 10 1500.5 11 1765.0 12 1765.0 13 1765.0 14 2505.0 15 3245.0 16 3245.0 17 3245.0 18 5529.5 19 7814.0 20 7814.0 21 7814.0 22 12603.0 23 17392.0 24 17392.0 25 17392.0 26 26099.5 27 34807.0 28 34807.0 29 34807.0 30 44016.0 31 53225.0 32 53225.0 33 53225.0 34 66946.5 35 80668.0 36 80668.0 37 80668.0 38 94098.5 39 107529.0 40 107529.0 41 107529.0 42 123774.5 43 140020.0 44 140020.0 45 140020.0 46 155451.5 47 170883.0 48 170883.0 49 170883.0 50 176695.5 51 182508.0 52 182508.0 53 182508.0 54 170538.0 55 158568.0 56 158568.0 57 158568.0 58 146876.0 59 135184.0 60 135184.0 61 135184.0 62 119334.0 63 103484.0 64 103484.0 65 103484.0 66 84988.5 67 66493.0 68 66493.0 69 66493.0 70 50712.5 71 34932.0 72 34932.0 73 34932.0 74 26442.0 75 17952.0 76 17952.0 77 17952.0 78 14749.5 79 11547.0 80 11547.0 81 11547.0 82 8015.0 83 4483.0 84 4483.0 85 4483.0 86 3296.0 87 2109.0 88 2109.0 89 2109.0 90 1420.0 91 731.0 92 731.0 93 731.0 94 448.0 95 165.0 96 165.0 97 165.0 98 343.5 99 522.0 100 522.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0011960166664922475 2 2.990041666230619E-4 3 7.475104165576547E-4 4 0.009119627082003388 5 0.03281570728688104 6 0.059202824991366254 7 0.1041282010264813 8 0.10719299373436769 9 0.11623786977471531 10 0.13126282914752416 11 0.13828942706316613 12 0.13111332706421264 13 0.12647876248155518 14 0.11377108540007505 15 0.1327578499806395 16 0.11608836769140378 17 0.12087243435737276 18 0.10898701873410606 19 0.09538232915275674 20 0.09044876040347623 21 0.08932749477863974 22 0.09994214269375844 23 0.0792361041551114 24 0.08970124998691856 25 0.08693546144565525 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1337774.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.24799462114949 #Duplication Level Percentage of deduplicated Percentage of total 1 78.33794268461727 41.71338350702418 2 12.901153351427649 13.739210885268886 3 3.84638107186203 6.144362358762018 4 1.5691250412449727 3.3421104702449314 5 0.8377446080511451 2.2304110191702184 6 0.5167172886613804 1.6508495644377679 7 0.3431768043453652 1.2791433642319694 8 0.2607208239940344 1.1106288826924806 9 0.1956448909066826 0.9375928288788974 >10 1.0148619925478677 9.70554238015991 >50 0.08430162183711637 3.1170026355954312 >100 0.0788325396931529 8.902217654543978 >500 0.009871680597905904 3.568844086797475 >1k 0.0035256002135378227 2.5587003621920035 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 2071 0.1548094072690903 No Hit GTATCAACGCAGAGTACTTTTTTTT 2003 0.14972633643649824 No Hit GAATAGGACCGCGGTTCTATTTTGT 1653 0.12356347185698033 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1628 0.1216946958155862 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1541 0.11519135519153459 No Hit TCGTAGTTCCGACCATAAACGATGC 1526 0.1140700895666981 No Hit GTATCTGATCGTCTTCGAACCTCCG 1506 0.1125750687335828 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1496 0.11182755831702514 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1492 0.11152855415040208 No Hit ATCAGATACCGTCGTAGTTCCGACC 1456 0.10883751665079454 No Hit GAACTACGACGGTATCTGATCGTCT 1444 0.10794050415092533 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1358 0.10151191456852951 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 7.475104165576547E-5 0.0 0.0 0.0 0.0 6 7.475104165576547E-5 0.0 0.0 0.0 0.0 7 7.475104165576547E-5 0.0 0.0 7.475104165576547E-5 0.0 8 7.475104165576547E-5 0.0 0.0 7.475104165576547E-5 0.0 9 7.475104165576547E-5 0.0 0.0 2.242531249672964E-4 0.0 10 7.475104165576547E-5 0.0 0.0 2.242531249672964E-4 0.0 11 7.475104165576547E-5 0.0 0.0 2.242531249672964E-4 0.0 12 7.475104165576547E-5 0.0 0.0 2.242531249672964E-4 1.4950208331153094E-4 13 7.475104165576547E-5 7.475104165576547E-5 0.0 2.242531249672964E-4 1.4950208331153094E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTA 130 0.0 14.616364 9 GGTATCA 525 0.0 13.928531 1 ACGTTCG 70 7.252891E-6 13.572846 7 GCGTAAC 135 1.8189894E-12 13.371767 11 ACTATAC 110 2.744855E-9 12.954443 3 CGCGTAA 140 3.6379788E-12 12.893721 10 GCGTTAT 170 0.0 12.84851 1 GTATCAA 1630 0.0 12.701142 1 GATATAC 115 5.347829E-9 12.387033 1 CGTTATT 170 0.0 12.29264 2 AACCGCG 95 1.0380882E-6 12.001252 7 CGGTTCT 390 0.0 11.449915 12 AAGACGG 425 0.0 11.401191 5 CAAGACG 410 0.0 11.354843 4 GGTCGCG 185 0.0 11.298477 7 TATACGC 160 4.5474735E-11 11.282429 7 GGGTCGC 195 0.0 11.2063 6 GGTTCTA 410 0.0 11.12228 13 ACAGCGC 120 1.2732198E-7 11.084075 8 TTAGAGT 155 3.110472E-10 11.033409 4 >>END_MODULE