##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062000_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1337774 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30237469109132 32.0 32.0 32.0 32.0 32.0 2 31.433110525395172 32.0 32.0 32.0 32.0 32.0 3 31.5629560747929 32.0 32.0 32.0 32.0 32.0 4 31.642023241593872 32.0 32.0 32.0 32.0 32.0 5 31.61500148754573 32.0 32.0 32.0 32.0 32.0 6 35.25901235933723 36.0 36.0 36.0 36.0 36.0 7 35.26212349769094 36.0 36.0 36.0 36.0 36.0 8 35.211910232969096 36.0 36.0 36.0 36.0 36.0 9 35.30460899972641 36.0 36.0 36.0 36.0 36.0 10 35.16830346530879 36.0 36.0 36.0 36.0 36.0 11 35.29826413131067 36.0 36.0 36.0 36.0 36.0 12 35.213846284947984 36.0 36.0 36.0 36.0 36.0 13 35.25526359459819 36.0 36.0 36.0 36.0 36.0 14 35.22092371357195 36.0 36.0 36.0 36.0 36.0 15 35.20011526610623 36.0 36.0 36.0 36.0 36.0 16 35.207226332698944 36.0 36.0 36.0 36.0 36.0 17 35.18634238668116 36.0 36.0 36.0 36.0 36.0 18 35.19070485747219 36.0 36.0 36.0 36.0 36.0 19 35.18034660562995 36.0 36.0 36.0 36.0 36.0 20 35.16840363170461 36.0 36.0 36.0 36.0 36.0 21 35.16642945669448 36.0 36.0 36.0 36.0 36.0 22 35.1571393972375 36.0 36.0 36.0 36.0 36.0 23 35.11965698242005 36.0 36.0 36.0 36.0 36.0 24 35.10396374873484 36.0 36.0 36.0 36.0 36.0 25 35.08362174776906 36.0 36.0 36.0 36.0 36.0 26 35.05010338069061 36.0 36.0 36.0 36.0 36.0 27 35.03723274633832 36.0 36.0 36.0 36.0 36.0 28 35.009749030852745 36.0 36.0 36.0 36.0 36.0 29 34.98800694287675 36.0 36.0 36.0 36.0 36.0 30 34.96747058920266 36.0 36.0 36.0 36.0 36.0 31 34.975116873253626 36.0 36.0 36.0 36.0 36.0 32 34.954164903787934 36.0 36.0 36.0 36.0 36.0 33 34.92200775317804 36.0 36.0 36.0 32.0 36.0 34 34.91815284195985 36.0 36.0 36.0 32.0 36.0 35 34.909673831304836 36.0 36.0 36.0 32.0 36.0 36 34.88372176466279 36.0 36.0 36.0 32.0 36.0 37 34.86770859651929 36.0 36.0 36.0 32.0 36.0 38 34.855043527531556 36.0 36.0 36.0 32.0 36.0 39 34.83273931172231 36.0 36.0 36.0 32.0 36.0 40 34.829441295764454 36.0 36.0 36.0 32.0 36.0 41 34.80316929466412 36.0 36.0 36.0 32.0 36.0 42 34.76719759839853 36.0 36.0 36.0 32.0 36.0 43 34.766186964315345 36.0 36.0 36.0 32.0 36.0 44 34.71571057592688 36.0 36.0 36.0 32.0 36.0 45 34.70818314603214 36.0 36.0 36.0 32.0 36.0 46 34.6827192036921 36.0 36.0 36.0 32.0 36.0 47 34.67105729368339 36.0 36.0 36.0 32.0 36.0 48 34.64387407738527 36.0 36.0 36.0 32.0 36.0 49 34.628198783950054 36.0 36.0 36.0 32.0 36.0 50 34.21587951328102 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 5.0 21 23.0 22 78.0 23 236.0 24 577.0 25 1319.0 26 2786.0 27 5400.0 28 9605.0 29 15796.0 30 24579.0 31 37402.0 32 57323.0 33 99016.0 34 227745.0 35 855877.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.118845640494555 17.788935705660013 12.065815988903553 26.026402664941884 2 16.3465800909165 19.74073622778014 36.97166278815081 26.941020893152555 3 18.716427237648436 23.19329389444791 28.274750591658034 29.815528276245622 4 12.584188360664806 15.797287135196228 35.21147817194832 36.40704633219064 5 14.782691246802523 36.57852522174896 32.8475512306264 15.791232300822111 6 35.239338242989085 34.96844006303017 16.198574944011387 13.593646749969352 7 31.185760823577073 29.925682514385837 19.836459671065516 19.05209699097157 8 28.587265113539356 32.94689536498691 18.726855208727333 19.7389843127464 9 27.053448489804705 14.273860906251729 18.569504266041946 40.10318633790162 10 16.632268703285234 26.41950465437709 30.316055115479234 26.632171526858446 11 37.72692547470649 21.027169013600204 21.788209368697554 19.457696142995754 12 24.826764460962764 23.448205750747135 28.128517970897924 23.596511817392177 13 29.313620985308432 19.15271189304023 25.212330333823203 26.321336787828137 14 23.686213067379093 19.623419202346586 24.574629197457867 32.11573853281646 15 25.332156253597393 27.305509002267947 21.66838344892336 25.6939512952113 16 26.088812310084357 25.739498342384497 23.320463609079322 24.85122573845182 17 24.286015425624957 26.191419477430415 24.639587852656728 24.8829772442879 18 25.073461860754737 24.88164997095911 25.85797697509809 24.186911193188063 19 25.813926717068803 24.83035251096224 24.89613342761931 24.459587344349643 20 26.041098245587808 24.260672611883958 24.473788468869838 25.2244406736584 21 27.044104609597735 24.09001819440354 24.14496021002053 24.7209169859782 22 26.27671041595965 24.088149418362146 24.874231372414172 24.760908793264033 23 24.608303956130044 24.253609733198182 25.34744336105106 25.79064294962071 24 24.90667165015885 24.81435245748458 25.16456737058494 25.11440852177163 25 25.064865458834824 24.35360663911333 25.121601711506248 25.459926190545602 26 24.63534327778048 25.534679110307117 25.431521978822886 24.39845563308952 27 25.380634011278485 24.718934822779435 24.833977191859873 25.066453974082204 28 24.855410527952472 24.514764683764493 25.412688291485797 25.217136496797245 29 24.76817746561626 24.740519476830457 25.308928522039302 25.18237453551398 30 24.677969142447076 24.987067934457603 25.549724913287886 24.78523800980744 31 25.417934948361747 24.616076928137016 24.535644446570707 25.430343676930526 32 25.29401695218062 24.646069595287056 24.375543351101804 25.68437010143052 33 24.663227617839496 24.60551977054403 25.055670879887693 25.675581731728776 34 25.58649930331717 24.640445877013054 25.12954413620299 24.64351068346679 35 25.96718576320497 24.368035533681724 25.284782993826305 24.379995709287 36 24.47681667728133 25.172525662070967 24.865074168094413 25.48558349255329 37 25.745335648658607 24.787311260000912 24.798225083404784 24.669128007935694 38 24.89658193386925 24.518416414132734 25.21135857028168 25.373643081716345 39 25.87461045159583 24.394382579328088 24.37322792384623 25.35777904522985 40 25.768555132795623 24.67666340252809 25.011474319202854 24.543307145473435 41 24.784041334892162 25.0988969587877 25.398204156811854 24.71885754950828 42 26.044339920954524 25.13188573615676 24.78300619491056 24.04076814797815 43 25.46811411758022 24.33161796146842 24.958361615539417 25.241906305411945 44 24.797939173935273 24.958287110268547 24.731333108073763 25.512440607722414 45 25.07680830292148 25.19035751181465 24.70282101385465 25.03001317140922 46 24.96049301133705 24.800670983406317 24.81711665512978 25.421719350126853 47 25.18846874053919 24.647039256067067 25.218818094494132 24.945673908899614 48 25.96646218847975 25.274909285542353 24.061047428673092 24.697581097304806 49 25.04696413233532 25.399727746327155 24.27393414032651 25.279373981011016 50 25.230348778624474 25.542663299829414 24.317026897321927 24.909961024224184 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 39.5 2 38.0 3 94.0 4 150.0 5 158.0 6 166.0 7 130.0 8 94.0 9 126.5 10 159.0 11 278.5 12 398.0 13 729.5 14 1061.0 15 1422.0 16 1783.0 17 1836.0 18 1889.0 19 1930.5 20 1972.0 21 2464.5 22 2957.0 23 3585.0 24 4213.0 25 5685.5 26 7158.0 27 9360.5 28 11563.0 29 13445.5 30 15328.0 31 17527.5 32 19727.0 33 22963.0 34 26199.0 35 30823.0 36 35447.0 37 42256.0 38 49065.0 39 53701.5 40 58338.0 41 63619.0 42 68900.0 43 70650.0 44 72400.0 45 79880.0 46 87360.0 47 93190.0 48 99020.0 49 103155.0 50 107290.0 51 103203.0 52 99116.0 53 98496.0 54 97876.0 55 98897.5 56 99919.0 57 96893.0 58 93867.0 59 85986.0 60 78105.0 61 67968.0 62 57831.0 63 50231.5 64 42632.0 65 35897.5 66 29163.0 67 25187.5 68 21212.0 69 19120.5 70 17029.0 71 13357.5 72 9686.0 73 8594.5 74 7503.0 75 5485.5 76 3468.0 77 3193.0 78 2918.0 79 2456.5 80 1995.0 81 1569.5 82 1144.0 83 976.0 84 808.0 85 633.5 86 459.0 87 314.0 88 169.0 89 118.0 90 67.0 91 47.0 92 27.0 93 24.0 94 21.0 95 18.5 96 16.0 97 17.0 98 18.0 99 13.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030573176037208077 2 0.004709315624313225 3 5.980083332461238E-4 4 0.0 5 0.0 6 1.4950208331153094E-4 7 0.0 8 0.0 9 0.0 10 7.475104165576547E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.727593749018893E-4 17 0.0 18 3.737552082788274E-4 19 0.0 20 2.990041666230619E-4 21 0.0 22 0.0 23 1.4950208331153094E-4 24 0.0017940249997383713 25 3.737552082788274E-4 26 6.727593749018893E-4 27 4.485062499345928E-4 28 0.0015697718747710748 29 3.737552082788274E-4 30 0.0010465145831807167 31 4.485062499345928E-4 32 8.222614582134202E-4 33 7.475104165576547E-5 34 4.485062499345928E-4 35 7.475104165576547E-5 36 1.4950208331153094E-4 37 0.0015697718747710748 38 0.0 39 5.232572915903584E-4 40 2.990041666230619E-4 41 0.0013455187498037785 42 0.004709315624313225 43 0.0049335687492805215 44 0.0043355604160343975 45 0.0020930291663614335 46 0.002691037499607557 47 0.001420269791459544 48 0.004485062499345928 49 0.0038123031244440392 50 0.0014950208331153095 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1337774.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.196026401907936 #Duplication Level Percentage of deduplicated Percentage of total 1 78.26930382846153 43.201545605747164 2 13.285895123217067 14.666572359881384 3 3.7708268167515415 6.244039696033217 4 1.5311590779429436 3.380555875666389 5 0.7963644117988311 2.1978075549594083 6 0.5094706059528474 1.687245181030164 7 0.33371543458365205 1.289383615660241 8 0.2278298512826048 1.006024198922993 9 0.17449178987843209 0.8668128096941499 >10 0.9476854996469988 9.3506254248595 >50 0.07238702434167749 2.771127392411757 >100 0.06941503906430482 7.978331043458711 >500 0.008591622808129513 3.217794219912921 >1k 0.002863874269376505 2.142135021761998 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1959 0.14643729060364455 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1741 0.1301415635226877 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1630 0.12184419789889771 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1602 0.11975116873253629 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1601 0.11967641769088053 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1563 0.11683587810796144 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1545 0.11549035935815766 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1523 0.11384583644173081 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1422 0.10629598123449849 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1373 0.102633180193366 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 2.990041666230619E-4 16 0.0 0.0 0.0 0.0 3.737552082788274E-4 17 0.0 0.0 0.0 0.0 4.485062499345928E-4 18 0.0 0.0 0.0 0.0 4.485062499345928E-4 19 0.0 7.475104165576547E-5 0.0 0.0 4.485062499345928E-4 20 0.0 7.475104165576547E-5 0.0 0.0 5.232572915903583E-4 21 0.0 7.475104165576547E-5 0.0 0.0 5.232572915903583E-4 22 0.0 7.475104165576547E-5 0.0 0.0 5.232572915903583E-4 23 0.0 7.475104165576547E-5 0.0 7.475104165576547E-5 5.232572915903583E-4 24 0.0 7.475104165576547E-5 0.0 7.475104165576547E-5 5.232572915903583E-4 25 0.0 7.475104165576547E-5 0.0 1.4950208331153094E-4 5.232572915903583E-4 26 0.0 7.475104165576547E-5 0.0 2.242531249672964E-4 5.232572915903583E-4 27 0.0 7.475104165576547E-5 0.0 2.990041666230619E-4 5.980083332461238E-4 28 0.0 7.475104165576547E-5 0.0 3.737552082788274E-4 6.727593749018893E-4 29 0.0 7.475104165576547E-5 0.0 4.485062499345928E-4 6.727593749018893E-4 30 0.0 7.475104165576547E-5 0.0 7.475104165576547E-4 6.727593749018893E-4 31 0.0 7.475104165576547E-5 0.0 0.0020182781247056678 6.727593749018893E-4 32 0.0 7.475104165576547E-5 0.0 0.0035132989578209772 6.727593749018893E-4 33 0.0 7.475104165576547E-5 0.0 0.0043355604160343975 6.727593749018893E-4 34 0.0 7.475104165576547E-5 0.0 0.006578091665707362 8.222614582134202E-4 35 0.0 7.475104165576547E-5 0.0 0.009343880206970684 8.222614582134202E-4 36 0.0 7.475104165576547E-5 0.0 0.012259170831545537 8.222614582134202E-4 37 0.0 7.475104165576547E-5 0.0 0.01779074791407218 8.222614582134202E-4 38 0.0 7.475104165576547E-5 0.0 0.02661137082945251 8.970124998691856E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 60 2.9468902E-7 29.332064 5 GGTATCA 675 0.0 29.019167 1 GTATCAA 1725 0.0 27.68658 1 TCGCGTC 90 4.0856503E-7 21.998224 17 CTCGGTA 55 0.004485951 19.998386 24 TAGGACG 260 0.0 19.460695 4 ATACCGT 455 0.0 19.33982 6 GTAAACG 400 0.0 19.249886 27 TAAACGC 415 0.0 18.5548 28 GTATAGG 155 7.185008E-10 18.459093 1 TCAACGC 2570 0.0 18.403872 4 ATCAACG 2585 0.0 18.382181 3 AACGCAG 2630 0.0 18.067657 6 TACCGTC 475 0.0 18.061699 7 CAACGCA 2650 0.0 17.9313 5 CGTCGTA 435 0.0 17.699722 10 CGCGGGA 425 0.0 17.60187 44 CCGTGCG 75 0.0012916669 17.59858 9 ACCGTCG 455 0.0 17.40519 8 GTCCTAC 370 0.0 17.250235 1 >>END_MODULE