##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061999_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 308378 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.070196317506436 32.0 32.0 32.0 32.0 32.0 2 31.410389197672984 32.0 32.0 32.0 32.0 32.0 3 31.568818138777733 32.0 32.0 32.0 32.0 32.0 4 31.67307979168423 32.0 32.0 32.0 32.0 32.0 5 31.658805102828346 32.0 32.0 32.0 32.0 32.0 6 35.292021480131524 36.0 36.0 36.0 36.0 36.0 7 35.29848108490229 36.0 36.0 36.0 36.0 36.0 8 35.26153940942609 36.0 36.0 36.0 36.0 36.0 9 35.28356108412403 36.0 36.0 36.0 36.0 36.0 10 35.2178916783947 36.0 36.0 36.0 36.0 36.0 11 35.32537340536614 36.0 36.0 36.0 36.0 36.0 12 35.26104650785724 36.0 36.0 36.0 36.0 36.0 13 35.27074240056035 36.0 36.0 36.0 36.0 36.0 14 35.24107102322474 36.0 36.0 36.0 36.0 36.0 15 35.21909150458204 36.0 36.0 36.0 36.0 36.0 16 35.23453683466395 36.0 36.0 36.0 36.0 36.0 17 35.223089844282015 36.0 36.0 36.0 36.0 36.0 18 35.20055581137435 36.0 36.0 36.0 36.0 36.0 19 35.184789446717986 36.0 36.0 36.0 36.0 36.0 20 35.15230009922887 36.0 36.0 36.0 36.0 36.0 21 35.12710050652122 36.0 36.0 36.0 36.0 36.0 22 35.12344914358352 36.0 36.0 36.0 36.0 36.0 23 35.104641057403576 36.0 36.0 36.0 36.0 36.0 24 35.101923613227925 36.0 36.0 36.0 36.0 36.0 25 35.0904279812438 36.0 36.0 36.0 36.0 36.0 26 35.03107225547867 36.0 36.0 36.0 36.0 36.0 27 35.02880879959012 36.0 36.0 36.0 36.0 36.0 28 34.99793435329369 36.0 36.0 36.0 36.0 36.0 29 34.95593719396325 36.0 36.0 36.0 36.0 36.0 30 34.937210177120285 36.0 36.0 36.0 36.0 36.0 31 34.917581669250076 36.0 36.0 36.0 36.0 36.0 32 34.876080654261976 36.0 36.0 36.0 32.0 36.0 33 34.831576831032045 36.0 36.0 36.0 32.0 36.0 34 34.796214386240266 36.0 36.0 36.0 32.0 36.0 35 34.764217940319995 36.0 36.0 36.0 32.0 36.0 36 34.70754074544877 36.0 36.0 36.0 32.0 36.0 37 34.675566998942855 36.0 36.0 36.0 32.0 36.0 38 34.64556485871236 36.0 36.0 36.0 32.0 36.0 39 34.5935605004248 36.0 36.0 36.0 32.0 36.0 40 34.57260894097504 36.0 36.0 36.0 32.0 36.0 41 34.5346230924385 36.0 36.0 36.0 32.0 36.0 42 34.497927867746725 36.0 36.0 36.0 32.0 36.0 43 34.44550519168034 36.0 36.0 36.0 32.0 36.0 44 34.390543423979665 36.0 36.0 36.0 32.0 36.0 45 34.344609537645354 36.0 36.0 36.0 32.0 36.0 46 34.228485819351576 36.0 36.0 36.0 32.0 36.0 47 34.154946202387976 36.0 36.0 36.0 32.0 36.0 48 34.12585852427865 36.0 36.0 36.0 32.0 36.0 49 34.038903553431176 36.0 36.0 36.0 32.0 36.0 50 33.649997730058566 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 6.0 19 18.0 20 38.0 21 49.0 22 88.0 23 172.0 24 306.0 25 571.0 26 1118.0 27 1935.0 28 3335.0 29 4891.0 30 6799.0 31 9636.0 32 13862.0 33 22227.0 34 46322.0 35 197005.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.09976774059609 18.362117063929727 12.247790940585709 25.290324254888475 2 14.79611360820864 20.915299748993053 39.483652118641324 24.804934524156984 3 18.48802443754094 25.95775314711166 28.89959724753387 26.654625167813528 4 11.840663082321047 16.396111266043622 36.71532988734605 35.04789576428928 5 13.068701398932477 38.295533403809614 33.62593959361563 15.009825603642282 6 32.283536061379415 36.56984794585848 17.57005224125016 13.576563751511946 7 28.318816517390992 31.714000350219536 21.17206804635869 18.79511508603078 8 27.24772843717775 34.01215391500042 19.66774542931078 19.07237221851105 9 27.72247047454747 14.004241547710928 19.30909468250005 38.96419329524156 10 15.370746291888526 28.19040268761066 32.728988449240866 23.709862571259947 11 35.153934457062434 21.985031357619544 23.638521554715318 19.2225126306027 12 24.685288833833802 24.49720797203432 30.245996796139803 20.571506397992074 13 29.91523390125106 21.188606191103126 25.781021992489737 23.115137915156076 14 22.734436308686092 20.385695477628104 27.815862350751352 29.06400586293445 15 23.81460415464138 28.411235561551084 24.786139089040073 22.988021194767462 16 22.81979525061856 26.86160122188101 26.865168284275416 23.453435243225012 17 21.793383444992834 26.602416514796772 27.70106816958408 23.90313187062631 18 21.985426928726852 25.55313787993268 30.108600835989712 22.352834355350755 19 24.128180350089824 24.614920649332962 29.062708753542733 22.194190247034484 20 24.68188185851039 24.889744986639688 28.742833424131582 21.685539730718347 21 24.549740902399 24.362308595295385 28.180025812476895 22.907924689828715 22 24.203736972157547 25.190837219256885 28.226397473230907 22.37902833535466 23 23.036088943079413 25.355652334642336 28.820891311608843 22.787367410669408 24 23.521361978111067 24.91803810295906 29.068828536684233 22.49177138224564 25 23.146343598906533 25.080339973474025 29.250884469334615 22.522431958284827 26 22.392217267936765 25.61102553708958 29.546493717065264 22.45026347790839 27 22.706872734112032 25.76091679691807 28.91224406410315 22.619966404866755 28 22.388795387404215 25.821326769853393 28.815428069253795 22.9744497734886 29 22.738327636861257 25.64579833840287 28.651849353715246 22.96402467102063 30 22.63373284561704 25.549653669546267 28.98150310011155 22.83511038472514 31 23.14310081491162 25.211024168469116 29.00475716412054 22.641117852498727 32 22.395784353465746 26.005674908796106 28.99002837454398 22.608512363194162 33 22.319037025987587 25.878953751564637 29.433357762226876 22.3686514602209 34 22.5336766394054 25.713257278499484 29.44087374421968 22.312192337875437 35 22.525277419271152 25.894843341613218 29.10940469164467 22.47047454747096 36 22.28149310746262 26.029178570386247 29.14354831910292 22.545780003048215 37 22.45567042403331 26.085377401320482 28.45329666766114 23.00565550698507 38 22.798967500924192 26.55150497117174 28.442366186952377 22.20716134095169 39 23.105085317370243 25.966832912853704 28.387887592500118 22.54019417727594 40 23.401474813378385 26.04465947635694 28.68719558463963 21.866670125625046 41 23.023267126064045 25.80624239967572 28.882042967166598 22.288447507093636 42 22.538623185585866 26.796253778002622 28.484518296558615 22.180604739852903 43 22.259479898690827 26.685756721785687 28.71323732094966 22.341526058573823 44 22.18017194132851 26.83932144467037 28.35313155684409 22.627375057157035 45 22.21580848731702 27.01075994110894 28.034543367297303 22.738888204276737 46 22.644978645990406 26.47054054667562 27.8260418389418 23.058438968392174 47 23.095182504475055 26.701170000259424 27.564077619529403 22.639569875736115 48 22.61710186662516 27.1766483765939 27.11470859114553 23.09154116563542 49 22.94862939289872 27.148495137287714 26.994457902434437 22.90841756737913 50 22.623900276613064 27.783236534975504 26.778933304796464 22.81392988361497 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 86.0 1 145.0 2 204.0 3 388.5 4 573.0 5 550.5 6 528.0 7 437.5 8 347.0 9 454.5 10 562.0 11 774.0 12 986.0 13 1731.0 14 2476.0 15 2912.0 16 3348.0 17 3173.5 18 2999.0 19 2726.5 20 2454.0 21 2489.0 22 2524.0 23 2622.0 24 2720.0 25 3057.5 26 3395.0 27 3970.5 28 4546.0 29 5271.0 30 5996.0 31 7176.5 32 8357.0 33 9761.5 34 11166.0 35 12563.0 36 13960.0 37 14461.0 38 14962.0 39 15244.0 40 15526.0 41 15990.0 42 16454.0 43 16803.0 44 17152.0 45 17690.0 46 18228.0 47 18709.5 48 19191.0 49 19653.0 50 20115.0 51 19969.5 52 19824.0 53 19352.0 54 18880.0 55 18346.0 56 17812.0 57 16822.5 58 15833.0 59 14598.0 60 13363.0 61 11850.5 62 10338.0 63 8920.5 64 7503.0 65 6291.5 66 5080.0 67 4336.0 68 3592.0 69 3017.5 70 2443.0 71 2022.5 72 1602.0 73 1381.0 74 1160.0 75 951.0 76 742.0 77 636.5 78 531.0 79 440.5 80 350.0 81 275.5 82 201.0 83 171.0 84 141.0 85 109.5 86 78.0 87 52.5 88 27.0 89 19.5 90 12.0 91 7.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 2.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03307628948887405 2 0.006485546958602754 3 0.0 4 0.0 5 0.0 6 3.242773479301377E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.242773479301377E-4 17 0.0 18 3.242773479301377E-4 19 0.0 20 6.485546958602754E-4 21 0.0 22 0.0 23 3.242773479301377E-4 24 9.728320437904131E-4 25 3.242773479301377E-4 26 9.728320437904131E-4 27 0.0 28 0.0016213867396506884 29 0.0 30 6.485546958602754E-4 31 3.242773479301377E-4 32 9.728320437904131E-4 33 0.0 34 0.0012971093917205508 35 0.0 36 3.242773479301377E-4 37 0.0019456640875808262 38 0.0 39 0.0 40 0.0 41 9.728320437904131E-4 42 0.004539882871021928 43 0.004864160218952065 44 0.005512714914812341 45 0.0038913281751616524 46 0.0016213867396506884 47 6.485546958602754E-4 48 0.004539882871021928 49 0.0035670508272315146 50 0.0016213867396506884 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 308378.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 75.55863210802222 #Duplication Level Percentage of deduplicated Percentage of total 1 83.16668106084319 62.8396065792147 2 11.819335714540093 17.861056780322862 3 2.881136156197168 6.530841206376692 4 0.9477000195434475 2.864276685017953 5 0.42172074584531183 1.5932321343823326 6 0.21433203446378654 0.9716781204607913 7 0.13048556725840865 0.6901517680319282 8 0.08111134251698641 0.4902929671223007 9 0.06120280053220948 0.41619599004544944 >10 0.24868809209396947 3.3285565468901277 >50 0.019842147556452642 1.0876048532831666 >100 0.006470265507530164 0.6505421897365974 >500 0.001294053101506033 0.6759641791150817 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 959 0.31098197666500205 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 583 0.18905369384327028 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 532 0.17251554909883327 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.485546958602754E-4 7 0.0 0.0 0.0 0.0 6.485546958602754E-4 8 0.0 0.0 0.0 0.0 6.485546958602754E-4 9 0.0 0.0 0.0 0.0 6.485546958602754E-4 10 0.0 0.0 0.0 0.0 6.485546958602754E-4 11 0.0 0.0 0.0 0.0 6.485546958602754E-4 12 0.0 0.0 0.0 0.0 0.0012971093917205508 13 0.0 0.0 0.0 0.0 0.0012971093917205508 14 0.0 0.0 0.0 0.0 0.0012971093917205508 15 0.0 0.0 0.0 0.0 0.0016213867396506884 16 0.0 0.0 0.0 0.0 0.0016213867396506884 17 0.0 0.0 0.0 0.0 0.0016213867396506884 18 0.0 0.0 0.0 0.0 0.0016213867396506884 19 0.0 0.0 0.0 0.0 0.0016213867396506884 20 0.0 0.0 0.0 0.0 0.0016213867396506884 21 0.0 0.0 0.0 3.242773479301377E-4 0.0016213867396506884 22 0.0 0.0 0.0 6.485546958602754E-4 0.0019456640875808262 23 0.0 0.0 0.0 0.0025942187834411016 0.0019456640875808262 24 0.0 0.0 0.0 0.00421560552309179 0.0019456640875808262 25 0.0 0.0 0.0 0.006161269610672616 0.0019456640875808262 26 0.0 0.0 0.0 0.008106933698253441 0.0025942187834411016 27 0.0 0.0 0.0 0.00843121104618358 0.0025942187834411016 28 0.0 0.0 0.0 0.01264681656927537 0.0025942187834411016 29 0.0 0.0 0.0 0.0171866994402973 0.0025942187834411016 30 0.0 0.0 0.0 0.02950923866164253 0.0025942187834411016 31 0.0 0.0 0.0 0.04766877014573024 0.0025942187834411016 32 0.0 0.0 0.0 0.06388263754223712 0.0025942187834411016 33 0.0 0.0 0.0 0.0843121104618358 0.0025942187834411016 34 0.0 0.0 0.0 0.10182308725006324 0.002918496131371239 35 0.0 0.0 0.0 0.12517105630103315 0.002918496131371239 36 0.0 0.0 0.0 0.14819474800407292 0.002918496131371239 37 0.0 0.0 0.0 0.18613519771189904 0.002918496131371239 38 0.0 0.0 0.0 0.23283113581383885 0.002918496131371239 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAG 25 0.0023464311 35.211163 1 TAGAACG 25 0.002350169 35.19974 4 GTGCGGC 30 0.005738671 29.333118 11 ATCCCGT 40 7.02048E-4 27.499796 20 TAGACTG 45 0.0013959155 24.444265 5 ATACATG 110 5.1968527E-9 22.006975 1 GCTATTC 50 0.0025762308 21.99984 3 CCCGTTT 50 0.0025762308 21.99984 22 ATTATGC 50 0.0025762308 21.99984 3 GTCCTAC 195 0.0 21.442696 1 GTCCTAA 135 1.10958354E-10 21.191902 1 GTATAAT 75 5.4424047E-5 20.539843 1 TAATACT 75 5.4560194E-5 20.533182 4 GTATTAT 55 0.0044679656 20.00634 1 GGGAACG 55 0.0044763633 19.999853 7 TCCCGTT 55 0.0044763633 19.999853 21 CACACCG 55 0.0044763633 19.999853 5 CACCGTC 55 0.0044763633 19.999853 7 TAAGCCA 55 0.0044763633 19.999853 4 TTTCTCG 100 1.1179654E-6 19.799856 41 >>END_MODULE