##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061998_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1427867 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266623572083393 32.0 32.0 32.0 32.0 32.0 2 30.82948131723753 32.0 32.0 32.0 32.0 32.0 3 30.848407449713452 32.0 32.0 32.0 32.0 32.0 4 30.861522116555673 32.0 32.0 32.0 32.0 32.0 5 30.789270989524933 32.0 32.0 32.0 32.0 32.0 6 34.43738317364292 36.0 36.0 36.0 32.0 36.0 7 34.37348786686715 36.0 36.0 36.0 32.0 36.0 8 34.334150169448556 36.0 36.0 36.0 32.0 36.0 9 34.45971508550866 36.0 36.0 36.0 32.0 36.0 10 34.16653581881226 36.0 36.0 36.0 32.0 36.0 11 34.43419870338064 36.0 36.0 36.0 32.0 36.0 12 34.2646941206709 36.0 36.0 36.0 32.0 36.0 13 34.360569997065554 36.0 36.0 36.0 32.0 36.0 14 34.26885697337357 36.0 36.0 36.0 32.0 36.0 15 34.21320403090764 36.0 36.0 36.0 32.0 36.0 16 34.22681804397749 36.0 36.0 36.0 32.0 36.0 17 34.15054413331214 36.0 36.0 36.0 32.0 36.0 18 34.158835521795794 36.0 36.0 36.0 32.0 36.0 19 34.159245223819866 36.0 36.0 36.0 32.0 36.0 20 34.14134859899416 36.0 36.0 36.0 32.0 36.0 21 34.11487834651267 36.0 36.0 36.0 32.0 36.0 22 34.09515592138484 36.0 36.0 36.0 32.0 36.0 23 34.060460112881664 36.0 36.0 36.0 32.0 36.0 24 34.03294494515246 36.0 36.0 36.0 32.0 36.0 25 33.696813498736226 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 21.0 5 114.0 6 292.0 7 59.0 8 234.0 9 202.0 10 112.0 11 32.0 12 56.0 13 66.0 14 244.0 15 350.0 16 534.0 17 693.0 18 997.0 19 1357.0 20 1950.0 21 2843.0 22 4055.0 23 6093.0 24 8449.0 25 11832.0 26 15848.0 27 20825.0 28 27163.0 29 36080.0 30 47508.0 31 64407.0 32 91473.0 33 131198.0 34 292060.0 35 660717.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.58295175837305 17.19895731636428 11.609380230751883 25.608710694510783 2 16.933381703885377 18.96998737976813 37.3878921411393 26.7087387752072 3 19.47018429742516 22.510969251079416 27.69013660350666 30.328709847988765 4 12.730036211835738 15.032254449433008 35.012572581266504 37.22513675746475 5 15.209188341667987 36.04584362612742 32.89537290156609 15.849595130638502 6 35.44069612699819 34.77446441122902 16.04569367076366 13.73914579100913 7 31.464238666422688 29.76620892776643 19.460879063405496 19.308673342405385 8 28.65465095327137 32.781415397472756 18.577521263073173 19.9864123861827 9 26.998362044303338 14.32559137492918 18.384930807590692 40.29111577317679 10 16.66067061774732 26.009387498343195 30.05970101105307 27.270240872856412 11 37.812231741596676 21.154612221081393 21.515937003809622 19.517219033512312 12 24.90680067546719 23.332370250270692 27.964285513921695 23.796543560340428 13 29.316886914508306 18.969948353663455 25.1617585700311 26.551406161797136 14 23.73799876175057 19.582360765302653 24.241221645946208 32.43841882700057 15 25.379106637942645 27.237051748126206 21.523593532606256 25.860248081324894 16 26.13583775309009 25.71877725828301 23.19474789857044 24.95063709005646 17 24.014374868522545 26.103148446812984 24.61328097608863 25.269195708575836 18 25.09594903658333 24.88995833911762 25.722054185789865 24.292038438509184 19 25.871172714705132 24.656003499552742 24.878581222992736 24.59424256274939 20 25.951717181205325 24.189006647492242 24.468421432642177 25.390854738660252 21 27.05332194916098 23.837363358386924 24.118602887261645 24.990711805190454 22 26.21634070369303 24.007966971141816 24.74675561855847 25.02893670660668 23 24.62515104702574 24.082292942914737 25.240413595493962 26.05214241456556 24 24.87179055806507 24.79888852437872 25.156178587551135 25.173142330005078 25 25.009270247517364 24.256785505748958 25.18009514883917 25.553849097894517 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 567.0 1 567.0 2 510.0 3 453.0 4 453.0 5 453.0 6 1030.0 7 1607.0 8 1607.0 9 1607.0 10 1884.0 11 2161.0 12 2161.0 13 2161.0 14 2661.5 15 3162.0 16 3162.0 17 3162.0 18 5619.5 19 8077.0 20 8077.0 21 8077.0 22 12887.0 23 17697.0 24 17697.0 25 17697.0 26 27074.0 27 36451.0 28 36451.0 29 36451.0 30 46373.5 31 56296.0 32 56296.0 33 56296.0 34 69555.5 35 82815.0 36 82815.0 37 82815.0 38 95984.0 39 109153.0 40 109153.0 41 109153.0 42 126223.5 43 143294.0 44 143294.0 45 143294.0 46 161986.0 47 180678.0 48 180678.0 49 180678.0 50 188388.0 51 196098.0 52 196098.0 53 196098.0 54 182901.5 55 169705.0 56 169705.0 57 169705.0 58 157891.0 59 146077.0 60 146077.0 61 146077.0 62 130632.0 63 115187.0 64 115187.0 65 115187.0 66 95321.5 67 75456.0 68 75456.0 69 75456.0 70 57409.0 71 39362.0 72 39362.0 73 39362.0 74 30217.5 75 21073.0 76 21073.0 77 21073.0 78 17163.0 79 13253.0 80 13253.0 81 13253.0 82 9199.5 83 5146.0 84 5146.0 85 5146.0 86 3822.5 87 2499.0 88 2499.0 89 2499.0 90 1653.0 91 807.0 92 807.0 93 807.0 94 482.5 95 158.0 96 158.0 97 158.0 98 396.5 99 635.0 100 635.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 9.104489423734845E-4 2 7.003453402872958E-5 3 8.404144083447548E-4 4 0.010995421842510542 5 0.03452702527616368 6 0.06205059714945439 7 0.1056120773153242 8 0.10981414935704796 9 0.11898867331481154 10 0.1350265816073906 11 0.14027917165954532 12 0.1324353038483276 13 0.12760292100034526 14 0.11625732648769109 15 0.13187502757609776 16 0.11870853517869662 17 0.12375102162876514 18 0.11128487457165129 19 0.09797831310619266 20 0.09202537771375065 21 0.09279575758806669 22 0.1035110412944623 23 0.08117002493929758 24 0.09069472156720479 25 0.08824351287619925 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1427867.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.391546643508015 #Duplication Level Percentage of deduplicated Percentage of total 1 70.87697185848414 30.045844584895352 2 15.100050261712502 12.80228969977402 3 5.572599410625142 7.08693323523303 4 2.6463869076503626 4.487377361297171 5 1.4649435746699233 3.1050611937863715 6 0.8903587548294216 2.264621081088429 7 0.6175278132487192 1.832457136929761 8 0.44286787310626646 1.5019083279756384 9 0.3070518780765892 1.171476361031442 >10 1.8083116431849025 14.22361758915221 >50 0.1441581166923358 4.277386377971923 >100 0.10888437329141151 9.599335649748173 >500 0.01441846246059472 4.165786745309243 >1k 0.00546907196781179 3.4359046558073003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3005 0.21045377475633234 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2396 0.16780274353283606 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2020 0.14146975873803372 No Hit GAATAGGACCGCGGTTCTATTTTGT 1891 0.1324353038483276 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1868 0.13082450956566682 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1830 0.1281631972725751 No Hit TATCAACGCAGAGTACTTTTTTTTT 1785 0.12501164324128228 No Hit TCGTAGTTCCGACCATAAACGATGC 1779 0.1245914360371099 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1751 0.12263046908430547 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1743 0.12207019281207562 No Hit GAACTACGACGGTATCTGATCGTCT 1735 0.1215099165398458 No Hit ATCAGATACCGTCGTAGTTCCGACC 1716 0.12017926039329994 No Hit GTATCTGATCGTCTTCGAACCTCCG 1592 0.11149497817373748 No Hit GAATAACGCCGCCGCATCGCCAGTC 1554 0.10883366588064573 No Hit ACCATACTCCCCCCGGAACCCAAAG 1469 0.10288073048820374 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.003453402872956E-5 2 0.0 0.0 0.0 0.0 7.003453402872956E-5 3 0.0 0.0 0.0 0.0 7.003453402872956E-5 4 0.0 0.0 0.0 0.0 7.003453402872956E-5 5 0.0 0.0 0.0 0.0 7.003453402872956E-5 6 0.0 0.0 0.0 0.0 7.003453402872956E-5 7 0.0 0.0 0.0 0.0 7.003453402872956E-5 8 0.0 0.0 0.0 0.0 7.003453402872956E-5 9 0.0 0.0 0.0 2.101036020861887E-4 7.003453402872956E-5 10 0.0 0.0 0.0 2.101036020861887E-4 7.003453402872956E-5 11 0.0 0.0 0.0 2.8013813611491825E-4 7.003453402872956E-5 12 0.0 0.0 0.0 2.8013813611491825E-4 7.703798743160253E-4 13 0.0 0.0 0.0 2.8013813611491825E-4 9.104489423734844E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 785 0.0 13.911367 1 TTAGAAC 70 7.264027E-6 13.570977 3 TCCAACG 70 7.279834E-6 13.568123 18 GACCGTC 50 0.0014970438 13.302824 7 TCTATAC 60 4.0928047E-4 12.666245 3 TAGGACG 260 0.0 12.423535 4 CGTTATT 140 5.2750693E-11 12.21131 2 TAGACTC 55 0.0030649663 12.0926285 5 ACGCCCC 205 0.0 12.045845 17 AGGCCCG 390 0.0 11.937594 10 TGTAGGA 335 0.0 11.907546 2 GACGTGA 160 3.6379788E-12 11.877522 7 TTAGGAC 200 0.0 11.874605 3 CCTATTC 305 0.0 11.835672 3 CTATTCC 315 0.0 11.76234 4 TACCACG 65 8.015505E-4 11.69356 13 AGAATTT 390 0.0 11.689459 17 CGGACCA 415 0.0 11.6775875 9 TCTAGAT 205 0.0 11.582543 2 GTCCTAT 305 0.0 11.519763 1 >>END_MODULE