##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061996_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 813752 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.145990424601106 32.0 32.0 32.0 32.0 32.0 2 31.43779185796164 32.0 32.0 32.0 32.0 32.0 3 31.57483115248872 32.0 32.0 32.0 32.0 32.0 4 31.664600517110863 32.0 32.0 32.0 32.0 32.0 5 31.644045114482054 32.0 32.0 32.0 32.0 32.0 6 35.2867138882608 36.0 36.0 36.0 36.0 36.0 7 35.300782056449634 36.0 36.0 36.0 36.0 36.0 8 35.260948052969454 36.0 36.0 36.0 36.0 36.0 9 35.32755679863153 36.0 36.0 36.0 36.0 36.0 10 35.22257518261092 36.0 36.0 36.0 36.0 36.0 11 35.33200778615598 36.0 36.0 36.0 36.0 36.0 12 35.26297692663121 36.0 36.0 36.0 36.0 36.0 13 35.266431296021395 36.0 36.0 36.0 36.0 36.0 14 35.242362537972255 36.0 36.0 36.0 36.0 36.0 15 35.2018305331354 36.0 36.0 36.0 36.0 36.0 16 35.21889347122956 36.0 36.0 36.0 36.0 36.0 17 35.1950434530422 36.0 36.0 36.0 36.0 36.0 18 35.18458080594579 36.0 36.0 36.0 36.0 36.0 19 35.16135628545306 36.0 36.0 36.0 36.0 36.0 20 35.14511054965149 36.0 36.0 36.0 36.0 36.0 21 35.11954993659002 36.0 36.0 36.0 36.0 36.0 22 35.062727956428986 36.0 36.0 36.0 36.0 36.0 23 35.04576824388757 36.0 36.0 36.0 36.0 36.0 24 35.02100025560613 36.0 36.0 36.0 36.0 36.0 25 34.96469317433321 36.0 36.0 36.0 36.0 36.0 26 34.907573806270214 36.0 36.0 36.0 36.0 36.0 27 34.839017292737836 36.0 36.0 36.0 32.0 36.0 28 34.784541236150574 36.0 36.0 36.0 32.0 36.0 29 34.724391460789036 36.0 36.0 36.0 32.0 36.0 30 34.694068954669234 36.0 36.0 36.0 32.0 36.0 31 34.6508211346946 36.0 36.0 36.0 32.0 36.0 32 34.6359984368702 36.0 36.0 36.0 32.0 36.0 33 34.6378798454566 36.0 36.0 36.0 32.0 36.0 34 34.595025265682914 36.0 36.0 36.0 32.0 36.0 35 34.55215962602857 36.0 36.0 36.0 32.0 36.0 36 34.45712084271375 36.0 36.0 36.0 32.0 36.0 37 34.373675272073065 36.0 36.0 36.0 32.0 36.0 38 34.33944862808325 36.0 36.0 36.0 32.0 36.0 39 34.18186499080801 36.0 36.0 36.0 32.0 36.0 40 34.164902820515344 36.0 36.0 36.0 32.0 36.0 41 34.123211985961326 36.0 36.0 36.0 32.0 36.0 42 34.07995064835478 36.0 36.0 36.0 32.0 36.0 43 34.0517258329319 36.0 36.0 36.0 32.0 36.0 44 34.02657566433017 36.0 36.0 36.0 32.0 36.0 45 33.923652414986385 36.0 36.0 36.0 32.0 36.0 46 33.84464554311387 36.0 36.0 36.0 32.0 36.0 47 33.81652763987062 36.0 36.0 36.0 32.0 36.0 48 33.77443250523501 36.0 36.0 36.0 32.0 36.0 49 33.7614334588425 36.0 36.0 36.0 32.0 36.0 50 33.39511915178089 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 21.0 21 40.0 22 128.0 23 369.0 24 913.0 25 2285.0 26 4473.0 27 7655.0 28 11589.0 29 15597.0 30 20687.0 31 28297.0 32 39976.0 33 60751.0 34 130906.0 35 490057.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.12918262682487 18.350084328640758 12.315177680200225 26.20555536433415 2 14.354657343172978 20.688324536231974 39.87833578095525 25.0786823396398 3 18.42398577448329 26.056683326185347 28.60562655069315 26.913704348638216 4 12.089186877574495 17.355041830926375 36.74927987888202 33.80649141261711 5 13.080921658986174 37.89960061443932 34.70734254992319 14.312135176651305 6 32.37222734254993 35.97665130568357 18.241720430107527 13.409400921658987 7 28.417994671595277 30.631076789980238 22.355951198891063 18.59497733953342 8 26.39809180192491 35.54313845004375 20.09678624445777 17.96198350357357 9 27.32822776472439 14.616369606464868 19.28179592799772 38.773606700813026 10 15.446597980711568 27.93135992292492 33.33214542022631 23.2898966761372 11 34.38652070901208 21.334264001808904 24.83361023997483 19.44560504920418 12 25.456650183348245 23.590725429860697 30.800170076386905 20.152454310404153 13 30.33811284027566 21.139241439652377 25.12743440261898 23.395211317452983 14 22.15060608145971 21.29002447920251 26.692038852131855 29.86733058720593 15 24.21511713642486 30.01516432524897 22.927624141015936 22.842094397310237 16 22.677536534652003 26.083627855306556 28.38593766129072 22.85289794875072 17 22.73444489230134 27.49977880238697 27.429610004030714 22.33616630128098 18 23.114715821812595 24.89536098310292 30.125345622119816 21.86457757296467 19 24.91864843342935 25.42150434038872 27.008351438767587 22.651495787414348 20 25.359324999877114 25.352074598032807 27.54280194851477 21.745798453575308 21 23.711155241400327 25.13714252007983 26.442454212094102 24.709248026425744 22 24.48313491088194 27.171669009722866 25.63815511359726 22.707040965797933 23 21.97023413796112 27.247524119786025 27.51824575330783 23.263995988945023 24 23.92346496752668 26.13349390779667 27.74149149917972 22.20154962549693 25 23.489003392929778 25.91198044610698 27.404083067179023 23.19493309378422 26 22.318539591641116 26.529809706972085 28.035441077978973 23.116209623407823 27 23.037362734592357 26.985740127213205 26.625802455785053 23.351094682409382 28 22.54338598720479 26.6858537472565 26.67147572572142 24.09928453981729 29 23.67305357432522 25.82654581025084 26.698437354070304 23.801963261353638 30 22.80636860331653 26.08910440901416 27.73225420342074 23.372272784248572 31 24.90678955453149 24.817695852534563 26.905683563748077 23.369831029185868 32 22.530276683727703 26.65884275786641 27.47482319399812 23.33605736440777 33 22.15968579953499 27.380098015601884 27.993924409030807 22.46629177583232 34 22.546934120801673 26.690236646033718 28.062776268299604 22.700052964865 35 22.33462365591398 27.3673732718894 27.866666666666667 22.431336405529954 36 22.74352748025187 26.50083318177126 28.144216637091578 22.611422700885285 37 22.858038194017745 26.73863887728267 26.32302701108462 24.080295917614965 38 23.441171265938518 27.68251260826394 26.326448352815106 22.54986777298243 39 24.31133471295782 26.015302034536493 26.38568696943034 23.28767628307535 40 24.270937915898106 26.042364310458606 27.447585317867507 22.239112455775782 41 24.092555247922864 25.93589360742546 27.22893402200454 22.742617122647133 42 23.435145836764086 27.197505769812146 27.323470784719028 22.043877608704733 43 22.53270150567023 27.16473890410016 27.26944271030472 23.03311687992489 44 22.141385938091425 27.495465248317597 27.156280569633633 23.206868243957352 45 23.004843111929834 27.228095702152917 26.55182965419861 23.215231531718636 46 22.85117390796758 26.145981185521084 27.41433021806853 23.588514688442796 47 24.41953631722921 26.21383085139589 26.656229339376168 22.710403491998733 48 22.577897938492733 27.23880918000553 26.398844818581217 23.784448062920518 49 23.586968142956685 26.52639883794236 26.489654418117087 23.396978600983864 50 22.647350142919993 28.65367647239543 25.766889259740804 22.932084124943778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 407.0 1 282.0 2 157.0 3 449.5 4 742.0 5 659.5 6 577.0 7 496.0 8 415.0 9 550.0 10 685.0 11 889.0 12 1093.0 13 1770.0 14 2447.0 15 3040.5 16 3634.0 17 3336.5 18 3039.0 19 2882.0 20 2725.0 21 3018.5 22 3312.0 23 3692.0 24 4072.0 25 4940.5 26 5809.0 27 7610.5 28 9412.0 29 12450.5 30 15489.0 31 19826.0 32 24163.0 33 29586.0 34 35009.0 35 40620.0 36 46231.0 37 46532.0 38 46833.0 39 46043.5 40 45254.0 41 45089.5 42 44925.0 43 46689.0 44 48453.0 45 50766.0 46 53079.0 47 54875.5 48 56672.0 49 56681.0 50 56690.0 51 55261.5 52 53833.0 53 52048.0 54 50263.0 55 48360.5 56 46458.0 57 43507.5 58 40557.0 59 37306.0 60 34055.0 61 29851.0 62 25647.0 63 21808.0 64 17969.0 65 15157.0 66 12345.0 67 10240.0 68 8135.0 69 6612.5 70 5090.0 71 4048.0 72 3006.0 73 2510.5 74 2015.0 75 1604.5 76 1194.0 77 967.0 78 740.0 79 620.0 80 500.0 81 407.0 82 314.0 83 235.0 84 156.0 85 116.5 86 77.0 87 52.0 88 27.0 89 19.5 90 12.0 91 12.0 92 12.0 93 8.5 94 5.0 95 10.0 96 15.0 97 9.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032933866829205946 2 0.00454683982343515 3 3.6866268838663374E-4 4 0.0 5 2.457751255910892E-4 6 2.457751255910892E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.915502511821784E-4 17 0.0 18 2.457751255910892E-4 19 0.0 20 4.915502511821784E-4 21 0.0 22 0.0 23 1.228875627955446E-4 24 8.60212939568812E-4 25 1.228875627955446E-4 26 8.60212939568812E-4 27 0.0 28 0.0012288756279554458 29 4.915502511821784E-4 30 0.0012288756279554458 31 2.457751255910892E-4 32 8.60212939568812E-4 33 4.915502511821784E-4 34 6.144378139777229E-4 35 2.457751255910892E-4 36 4.915502511821784E-4 37 0.001474650753546535 38 0.0 39 4.915502511821784E-4 40 1.228875627955446E-4 41 0.0013517631907509905 42 0.004178177135048516 43 0.003440851758275248 44 0.0044239522606396055 45 0.002334863693115347 46 0.002089088567524258 47 7.373253767732675E-4 48 0.003317964195479704 49 0.0028264139442975254 50 0.0012288756279554458 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 813752.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.03483619065571 #Duplication Level Percentage of deduplicated Percentage of total 1 75.426923656832 47.54523777073499 2 14.677020915201066 18.50327218313054 3 4.7625270499996155 9.006153373508777 4 1.984704061798295 5.004219816895382 5 1.0183605338472734 3.209609471704579 6 0.5957140668742958 2.253044317313434 7 0.3589432651553841 1.5838150944566114 8 0.24196026836874096 1.2201540705016545 9 0.16982662563053333 0.9634494174689232 >10 0.7246826042086993 7.426244681630462 >50 0.025834024442863507 1.1083105628503018 >100 0.011741676229794658 1.3635747066202861 >500 0.0015655568102057003 0.6753728481308597 >1k 1.9569460127571254E-4 0.137541685053134 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1115 0.13701963251703222 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 856 0.10519175375298616 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.457751255910892E-4 2 0.0 0.0 0.0 0.0 2.457751255910892E-4 3 0.0 0.0 0.0 0.0 2.457751255910892E-4 4 0.0 0.0 0.0 0.0 2.457751255910892E-4 5 0.0 0.0 0.0 0.0 2.457751255910892E-4 6 0.0 0.0 0.0 0.0 2.457751255910892E-4 7 0.0 0.0 0.0 0.0 2.457751255910892E-4 8 0.0 0.0 0.0 0.0 2.457751255910892E-4 9 0.0 0.0 0.0 0.0 2.457751255910892E-4 10 0.0 0.0 0.0 0.0 2.457751255910892E-4 11 0.0 0.0 0.0 0.0 3.686626883866338E-4 12 0.0 0.0 0.0 0.0 9.831005023643567E-4 13 0.0 0.0 0.0 1.228875627955446E-4 9.831005023643567E-4 14 0.0 0.0 0.0 2.457751255910892E-4 9.831005023643567E-4 15 0.0 0.0 0.0 3.686626883866338E-4 9.831005023643567E-4 16 0.0 0.0 0.0 6.144378139777229E-4 9.831005023643567E-4 17 0.0 0.0 0.0 0.0011059880651599014 9.831005023643567E-4 18 0.0 0.0 0.0 0.0013517631907509905 9.831005023643567E-4 19 0.0 0.0 0.0 0.0019662010047287134 9.831005023643567E-4 20 0.0 0.0 0.0 0.0025806388187064365 0.0011059880651599014 21 0.0 0.0 0.0 0.0038095144466618823 0.0014746507535465352 22 0.0 0.0 0.0 0.005529940325799507 0.0014746507535465352 23 0.0 0.0 0.0 0.008479241832892576 0.0014746507535465352 24 0.0 0.0 0.0 0.011551430902781192 0.0014746507535465352 25 0.0 0.0 0.0 0.013763407033100994 0.0014746507535465352 26 0.0 0.0 0.0 0.015852495600625252 0.0014746507535465352 27 0.0 0.0 0.0 0.018801797107718322 0.0014746507535465352 28 0.0 0.0 0.0 0.023225749368357928 0.0014746507535465352 29 0.0 0.0 0.0 0.0283870270057708 0.0014746507535465352 30 0.0 0.0 0.0 0.035391618085116844 0.0014746507535465352 31 0.0 0.0 0.0 0.044362410169191596 0.0018433134419331687 32 0.0 0.0 0.0 0.05640539132315497 0.0018433134419331687 33 0.0 0.0 0.0 0.06758815953754953 0.0018433134419331687 34 0.0 0.0 0.0 0.07754205212398864 0.0019662010047287134 35 0.0 0.0 0.0 0.09351743528740943 0.0019662010047287134 36 0.0 0.0 0.0 0.10740372988330597 0.0019662010047287134 37 0.0 0.0 0.0 0.12460798867468222 0.0019662010047287134 38 0.0 0.0 0.0 0.15311790324324856 0.0019662010047287134 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTAGCG 30 0.0057471795 29.329931 7 TAGGACC 595 0.0 24.400532 4 GTCCGGC 50 0.0025750159 22.006916 40 TCCGAAT 65 4.934113E-4 20.305338 11 TTAGGAC 855 0.0 20.06785 3 GTATTAT 90 9.985863E-6 19.561703 1 ACGGAAA 755 0.0 19.23665 38 GTAGGAC 1545 0.0 19.221073 3 ATCACGG 665 0.0 19.186924 35 CTGTAGG 1540 0.0 19.148874 1 GTCCTAC 1370 0.0 19.115498 1 TAGGACG 1520 0.0 19.103048 4 TCCTACA 1405 0.0 19.102163 2 CACGGAA 720 0.0 18.946905 37 TGTAGGA 1570 0.0 18.916168 2 AACGCAT 105 1.7921539E-6 18.856117 23 ACGCATA 70 8.12318E-4 18.856115 24 CTTTAGG 920 0.0 18.658037 1 AGGACGT 1545 0.0 18.65156 5 GGACGTG 1530 0.0 18.54687 6 >>END_MODULE