##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061994_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3334066 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.240543528532427 32.0 32.0 32.0 32.0 32.0 2 31.3763947684299 32.0 32.0 32.0 32.0 32.0 3 31.531385701422828 32.0 32.0 32.0 32.0 32.0 4 31.621010801825758 32.0 32.0 32.0 32.0 32.0 5 31.586131468303268 32.0 32.0 32.0 32.0 32.0 6 35.21935198643338 36.0 36.0 36.0 36.0 36.0 7 35.23078007453962 36.0 36.0 36.0 36.0 36.0 8 35.17471519759957 36.0 36.0 36.0 36.0 36.0 9 35.27783583168419 36.0 36.0 36.0 36.0 36.0 10 35.14014329650343 36.0 36.0 36.0 36.0 36.0 11 35.26985878503905 36.0 36.0 36.0 36.0 36.0 12 35.19522708908582 36.0 36.0 36.0 36.0 36.0 13 35.230412055430214 36.0 36.0 36.0 36.0 36.0 14 35.19272803837716 36.0 36.0 36.0 36.0 36.0 15 35.160779060762444 36.0 36.0 36.0 36.0 36.0 16 35.181425922582214 36.0 36.0 36.0 36.0 36.0 17 35.16685632497977 36.0 36.0 36.0 36.0 36.0 18 35.163609838557484 36.0 36.0 36.0 36.0 36.0 19 35.15242349731529 36.0 36.0 36.0 36.0 36.0 20 35.15241719869972 36.0 36.0 36.0 36.0 36.0 21 35.142652245036544 36.0 36.0 36.0 36.0 36.0 22 35.12598040950599 36.0 36.0 36.0 36.0 36.0 23 35.0926013462241 36.0 36.0 36.0 36.0 36.0 24 35.082320805886866 36.0 36.0 36.0 36.0 36.0 25 35.06952891754393 36.0 36.0 36.0 36.0 36.0 26 35.02698146947301 36.0 36.0 36.0 36.0 36.0 27 35.0138293603066 36.0 36.0 36.0 36.0 36.0 28 34.99510267643172 36.0 36.0 36.0 36.0 36.0 29 34.97654125623188 36.0 36.0 36.0 36.0 36.0 30 34.95664452953241 36.0 36.0 36.0 36.0 36.0 31 34.95828306938135 36.0 36.0 36.0 36.0 36.0 32 34.93759031764818 36.0 36.0 36.0 36.0 36.0 33 34.918332750461445 36.0 36.0 36.0 32.0 36.0 34 34.906658416480056 36.0 36.0 36.0 32.0 36.0 35 34.89816638302901 36.0 36.0 36.0 32.0 36.0 36 34.874712738140154 36.0 36.0 36.0 32.0 36.0 37 34.86313648260112 36.0 36.0 36.0 32.0 36.0 38 34.852549709573836 36.0 36.0 36.0 32.0 36.0 39 34.83573510542383 36.0 36.0 36.0 32.0 36.0 40 34.82245102526465 36.0 36.0 36.0 32.0 36.0 41 34.80131317136493 36.0 36.0 36.0 32.0 36.0 42 34.77599183699423 36.0 36.0 36.0 32.0 36.0 43 34.76618549242876 36.0 36.0 36.0 32.0 36.0 44 34.731462124625004 36.0 36.0 36.0 32.0 36.0 45 34.718113858573886 36.0 36.0 36.0 32.0 36.0 46 34.70626646263151 36.0 36.0 36.0 32.0 36.0 47 34.68020849017386 36.0 36.0 36.0 32.0 36.0 48 34.65183952567226 36.0 36.0 36.0 32.0 36.0 49 34.63990214950754 36.0 36.0 36.0 32.0 36.0 50 34.219542144636605 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 4.0 19 5.0 20 34.0 21 70.0 22 237.0 23 602.0 24 1474.0 25 3613.0 26 7564.0 27 14609.0 28 25562.0 29 41069.0 30 62352.0 31 93359.0 32 143477.0 33 248397.0 34 568594.0 35 2123043.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.886298326031685 17.777445081634234 12.58110468587517 25.755151906458913 2 16.463348243650966 19.361876798363976 37.179751362729846 26.995023595255212 3 19.308404975193916 22.434772489165617 27.997838071948895 30.258984463691576 4 13.298125050988824 15.833979191761166 34.12403001262123 36.74386574462878 5 15.427902832070059 35.79968344929295 32.681206083988215 16.091207634648775 6 35.80510374585228 33.77388716043288 16.265299285166048 14.155709808548794 7 31.78773305627423 29.390539959316943 19.24398017315794 19.577746811250886 8 28.624358366031146 33.2424733043677 18.19622047074053 19.936947858860623 9 26.841340273407905 15.163017168826293 18.501703325609032 39.49393923215677 10 17.343463515836383 26.50351837982666 30.148650460414217 26.004367643922745 11 36.98151146378026 21.465291928834045 21.443156794136648 20.11003981324905 12 24.757495729687335 23.18230148482408 28.02167924140651 24.038523544082075 13 29.883721558001554 19.39124780373274 24.75505883806739 25.969971800198316 14 23.92640097706524 18.936757700657395 24.747260552130644 32.38958077014672 15 25.610140891032152 26.6771263676244 21.746960018188002 25.96577272315545 16 26.169552142826717 25.768418867840776 23.040268693908377 25.021760295424126 17 24.557552250015448 25.84789863188071 24.64696259762104 24.947586520482798 18 25.218892018869465 25.30641283430672 25.08374164383167 24.390953502992144 19 25.886987806176542 24.879718901701075 24.834218888953874 24.399074403168505 20 26.202355747153845 24.28415333981792 24.716089307357787 24.797401605670448 21 26.52883896119633 24.15204138130439 24.49573583726297 24.823383820236312 22 26.26246750964138 23.87511225032738 24.73226384840612 25.130156391625118 23 25.21940190710196 24.326677592271775 24.880596173318807 25.573324327307457 24 25.077076506624874 24.458784802153552 24.995883354204 25.46825533701757 25 25.363430772091682 24.20037431839859 25.04163092445847 25.39456398505126 26 25.114365342832084 24.755732664037634 25.099878466202686 25.030023526927593 27 25.484050348314696 24.70862799462756 24.729683442439747 25.077638214618 28 25.457908582949635 24.269612302516755 25.016789056564498 25.25569005796911 29 25.12998428041272 24.63467181274945 25.001012280233958 25.23433162660386 30 25.271158327909465 24.674223087374738 24.89161765191075 25.163000932805048 31 25.500171562805185 24.413027255690967 24.6263710027666 25.460430178737248 32 25.61594867974148 24.610173111092713 24.43051141496633 25.34336679419948 33 25.313521652279803 24.46902575238598 24.677060400832616 25.5403921945016 34 25.666369529303225 24.43242964383108 24.8661082243863 25.0350926024794 35 25.66402444584147 24.501119354637463 24.93119508203802 24.903661117483047 36 25.153341479552573 24.686853453834992 24.858475937160136 25.3013291294523 37 25.939273200412476 24.455056277508135 24.61114440431264 24.994526117766753 38 25.34829844400201 24.330682116070886 24.900376897158004 25.4206425427691 39 25.729384495225617 24.521871936903054 24.538518387879705 25.210225179991625 40 25.808338297248223 24.475549644847636 24.542824938468453 25.173287119435688 41 25.10716026424517 24.734517587600575 25.02842660148019 25.129895546674064 42 25.820236622638365 24.544769574278416 24.693093647230462 24.941900155852757 43 25.651499163448737 24.078488844683417 24.774125160546454 25.49588683132139 44 25.155702596343044 24.671227863895954 24.74006574842828 25.433003791332727 45 25.44532910217322 24.670282948834657 24.606605588790625 25.2777823602015 46 25.40438819947408 24.548865967383797 24.62898025697161 25.417765576170513 47 25.44455315531811 24.711864528788354 24.741888325871876 25.101693990021662 48 25.694474647434866 24.811280884411545 24.251099980413464 25.24314448774012 49 25.439285313644106 24.841223802002315 24.41149175539557 25.30799912895801 50 25.469208061614466 24.92790989381594 24.37275458890193 25.230127455667663 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 16.5 2 28.0 3 104.0 4 180.0 5 215.0 6 250.0 7 228.0 8 206.0 9 276.0 10 346.0 11 589.5 12 833.0 13 1613.5 14 2394.0 15 3066.5 16 3739.0 17 3787.0 18 3835.0 19 3786.5 20 3738.0 21 4438.0 22 5138.0 23 6989.0 24 8840.0 25 11353.0 26 13866.0 27 17972.5 28 22079.0 29 26982.5 30 31886.0 31 38190.5 32 44495.0 33 52419.0 34 60343.0 35 70480.5 36 80618.0 37 93845.0 38 107072.0 39 122260.0 40 137448.0 41 151251.5 42 165055.0 43 174321.0 44 183587.0 45 200796.0 46 218005.0 47 231105.0 48 244205.0 49 255093.5 50 265982.0 51 267816.5 52 269651.0 53 270469.0 54 271287.0 55 267300.5 56 263314.0 57 250396.0 58 237478.0 59 218589.0 60 199700.0 61 176596.0 62 153492.0 63 133172.0 64 112852.0 65 94436.0 66 76020.0 67 64541.0 68 53062.0 69 44546.0 70 36030.0 71 28250.5 72 20471.0 73 17371.0 74 14271.0 75 11363.5 76 8456.0 77 7032.0 78 5608.0 79 4695.0 80 3782.0 81 2940.0 82 2098.0 83 1670.5 84 1243.0 85 928.5 86 614.0 87 415.0 88 216.0 89 149.0 90 82.0 91 61.5 92 41.0 93 34.5 94 28.0 95 36.0 96 44.0 97 42.0 98 40.0 99 26.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030833222857615895 2 0.00398912319072268 3 1.4996703724521351E-4 4 5.99868148980854E-5 5 8.99802223471281E-5 6 1.4996703724521351E-4 7 0.0 8 0.0 9 0.0 10 8.99802223471281E-5 11 0.0 12 2.99934074490427E-5 13 0.0 14 0.0 15 0.0 16 3.599208893885124E-4 17 0.0 18 5.99868148980854E-5 19 2.99934074490427E-5 20 2.099538521432989E-4 21 0.0 22 0.0 23 5.99868148980854E-5 24 0.0012297297054107508 25 1.799604446942562E-4 26 4.199077042865978E-4 27 3.599208893885124E-4 28 0.0014696769650030925 29 2.699406670413843E-4 30 0.0010797626681655372 31 2.9993407449042703E-4 32 6.598549638789394E-4 33 1.799604446942562E-4 34 8.998022234712811E-4 35 5.99868148980854E-5 36 1.199736297961708E-4 37 0.0015596571873502205 38 0.0 39 6.598549638789394E-4 40 1.199736297961708E-4 41 0.0012297297054107508 42 0.004499011117356405 43 0.004199077042865978 44 0.004379037487560234 45 0.0021295319288820317 46 0.002369479188474373 47 0.0013197099277578788 48 0.0042890572652131064 49 0.003839156153477466 50 0.0013197099277578788 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3334066.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.636897608932046 #Duplication Level Percentage of deduplicated Percentage of total 1 66.67295508313714 29.76073869330918 2 16.42964825405701 14.66737053734224 3 6.738223559432393 9.023201852654323 4 3.2476592214231035 5.798617285414681 5 1.9104160627012854 4.263752309062819 6 1.1415165558900249 3.057225457449828 7 0.7673198015508333 2.397554279059142 8 0.5293275334576414 1.8902031130029835 9 0.3930138167141048 1.5788625746006775 >10 1.9567085733611913 15.782608444046552 >50 0.1395018446417223 4.279103484345913 >100 0.0684406517207671 5.491634998586785 >500 0.0037829018879540514 1.115963879375554 >1k 0.0014861400248208 0.8931630917491811 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.799604446942562E-4 2 0.0 0.0 0.0 0.0 1.799604446942562E-4 3 0.0 0.0 0.0 2.99934074490427E-5 1.799604446942562E-4 4 0.0 0.0 0.0 2.99934074490427E-5 1.799604446942562E-4 5 0.0 0.0 0.0 2.99934074490427E-5 1.799604446942562E-4 6 0.0 0.0 0.0 2.99934074490427E-5 2.399472595923416E-4 7 0.0 0.0 0.0 2.99934074490427E-5 2.399472595923416E-4 8 0.0 0.0 0.0 2.99934074490427E-5 2.399472595923416E-4 9 0.0 0.0 0.0 2.99934074490427E-5 2.399472595923416E-4 10 0.0 0.0 0.0 2.99934074490427E-5 2.699406670413843E-4 11 0.0 0.0 0.0 8.99802223471281E-5 3.299274819394697E-4 12 0.0 0.0 0.0 8.99802223471281E-5 8.698088160222383E-4 13 0.0 0.0 0.0 8.99802223471281E-5 0.0010797626681655372 14 0.0 2.99934074490427E-5 0.0 1.4996703724521351E-4 0.0011397494830636225 15 0.0 2.99934074490427E-5 0.0 2.9993407449042703E-4 0.0014396835575540496 16 0.0 2.99934074490427E-5 0.0 4.199077042865978E-4 0.0014396835575540496 17 0.0 2.99934074490427E-5 0.0 5.398813340827686E-4 0.0014396835575540496 18 0.0 2.99934074490427E-5 0.0 6.898483713279821E-4 0.001499670372452135 19 0.0 5.99868148980854E-5 0.0 8.098220011241529E-4 0.001499670372452135 20 0.0 5.99868148980854E-5 0.0 9.597890383693664E-4 0.0018595912618406473 21 0.0 5.99868148980854E-5 0.0 0.0010497692607164945 0.002009558299085861 22 0.0 5.99868148980854E-5 0.0 0.0011997362979617081 0.0020395517065349036 23 0.0 5.99868148980854E-5 0.0 0.0014396835575540496 0.0020695451139839463 24 0.0 5.99868148980854E-5 0.0 0.0018595912618406473 0.002099538521432989 25 0.0 5.99868148980854E-5 0.0 0.0024894528182705443 0.0021295319288820317 26 0.0 5.99868148980854E-5 0.0 0.0030593275598023557 0.0022495055586782024 27 0.0 5.99868148980854E-5 0.0 0.0037191825236812946 0.002369479188474373 28 0.0 5.99868148980854E-5 0.0 0.004379037487560234 0.0024594594108215016 29 0.0 5.99868148980854E-5 0.0 0.00521885289613343 0.0024594594108215016 30 0.0 5.99868148980854E-5 0.0 0.00632860897174801 0.0024594594108215016 31 0.0 5.99868148980854E-5 0.0 0.007798285936751102 0.0025494396331686296 32 0.0 5.99868148980854E-5 0.0 0.010017798087980262 0.002609426448066715 33 0.0 5.99868148980854E-5 0.0 0.012237310239209423 0.0026394198555157577 34 0.0 5.99868148980854E-5 0.0 0.014786749872378052 0.002789386892760971 35 0.0 1.199736297961708E-4 0.0 0.017816084024731366 0.002789386892760971 36 0.0 1.199736297961708E-4 0.0 0.02099538521432989 0.002789386892760971 37 0.0 1.199736297961708E-4 0.0 0.026694132629648003 0.002879367115108099 38 0.0 1.199736297961708E-4 0.0 0.03422247789935772 0.0029393539300061845 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1990 0.0 26.874079 1 GTATCAA 3715 0.0 24.70345 1 TACCGTA 270 0.0 18.739954 7 TATGCGA 280 0.0 17.284988 12 GGCGTTA 795 0.0 16.327093 42 GTATAGG 560 0.0 15.719993 1 CGTACAC 350 0.0 15.713862 3 TATCAAC 5780 0.0 15.568456 2 TCAACGC 5750 0.0 15.495235 4 CGTCGTA 560 0.0 15.3207855 10 ATCAACG 5890 0.0 15.201628 3 ACCGTCG 550 0.0 15.199362 8 CAACGCA 5880 0.0 15.190067 5 GTCCTAA 290 0.0 15.177923 1 CGTTATT 790 0.0 15.037795 44 ATACCGT 665 0.0 14.886594 6 ACCGTAT 340 0.0 14.881729 8 CTAGCGG 355 0.0 14.873508 29 CCGTCGT 565 0.0 14.795839 9 AACGCAG 6100 0.0 14.750201 6 >>END_MODULE