##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061993_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 59308 Sequences flagged as poor quality 0 Sequence length 25 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.429587913940782 32.0 32.0 32.0 32.0 32.0 2 31.23715181763 32.0 32.0 32.0 32.0 32.0 3 31.22142038173602 32.0 32.0 32.0 32.0 32.0 4 31.207341336750524 32.0 32.0 32.0 32.0 32.0 5 31.248718553989345 32.0 32.0 32.0 32.0 32.0 6 34.82474539691104 36.0 36.0 36.0 36.0 36.0 7 34.8071086531328 36.0 36.0 36.0 32.0 36.0 8 34.76996357995549 36.0 36.0 36.0 32.0 36.0 9 34.84216294597693 36.0 36.0 36.0 32.0 36.0 10 34.727726444998986 36.0 36.0 36.0 32.0 36.0 11 34.820867336615635 36.0 36.0 36.0 36.0 36.0 12 34.75209078033318 36.0 36.0 36.0 32.0 36.0 13 34.745110271801444 36.0 36.0 36.0 32.0 36.0 14 34.75020233358063 36.0 36.0 36.0 32.0 36.0 15 34.7294968638295 36.0 36.0 36.0 32.0 36.0 16 34.74517771632832 36.0 36.0 36.0 32.0 36.0 17 34.66264247656303 36.0 36.0 36.0 32.0 36.0 18 34.68860861941054 36.0 36.0 36.0 32.0 36.0 19 34.59336008632899 36.0 36.0 36.0 32.0 36.0 20 34.603594793282525 36.0 36.0 36.0 32.0 36.0 21 34.605837323801175 36.0 36.0 36.0 32.0 36.0 22 34.551982869090175 36.0 36.0 36.0 32.0 36.0 23 34.55328117623255 36.0 36.0 36.0 32.0 36.0 24 34.476411276724896 36.0 36.0 36.0 32.0 36.0 25 34.02043569164362 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 2.0 5 4.0 6 8.0 7 1.0 8 9.0 9 6.0 10 1.0 11 0.0 12 0.0 13 4.0 14 6.0 15 10.0 16 31.0 17 34.0 18 50.0 19 58.0 20 60.0 21 89.0 22 110.0 23 130.0 24 191.0 25 283.0 26 347.0 27 482.0 28 683.0 29 1001.0 30 1320.0 31 2050.0 32 3101.0 33 4967.0 34 13259.0 35 31011.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.370472786133405 19.07499831388683 13.0707493086936 26.483779591286165 2 14.315100829567681 20.115330140959063 42.103932015916904 23.46563701355635 3 17.697443852431373 24.477304916706007 29.94536993322992 27.879881297632696 4 11.911908535968433 17.29621260665745 37.67326565714478 33.11861320022933 5 12.428320852728868 38.15691830263779 35.54442420562639 13.87033663900695 6 31.230071027280548 37.22099438192769 18.65773623740995 12.89119835338181 7 29.013533124093012 31.434983632007018 21.491006040970607 18.060477202929366 8 25.46620538351194 37.54788625432453 19.65572525525272 17.33018310691081 9 27.088607594936708 15.689451476793248 19.826160337552743 37.3957805907173 10 16.341171108822984 28.621102915112335 33.69680806171193 21.34091791435275 11 33.47286690859988 21.563001097138997 25.94986918727319 19.01426280698793 12 26.316144822347876 23.52941176470588 30.71989197400625 19.434551438939994 13 29.17060491493384 22.886848501215233 25.038819875776397 22.903726708074533 14 20.993384189563223 23.059137244312428 26.60500911361642 29.34246945250793 15 21.576735472328647 33.78284865567351 22.21134533916184 22.429070532835997 16 20.47560378727785 27.731177532868646 29.290644883630655 22.50257379622285 17 20.87594936708861 29.741772151898733 27.851476793248946 21.530801687763713 18 20.751628472105033 26.86725842924162 31.934928617233115 20.44618448142023 19 23.926908281028545 26.397043936019436 27.26429101707498 22.411756765877033 20 24.991985421904264 27.96497207552264 27.497595626571282 19.545446876001822 21 22.836027401883037 26.365875881618468 25.82424999156346 24.97384672493504 22 24.168944686308258 29.39826533022848 26.46890081333738 19.96388917012588 23 21.325774830861636 29.10023451603651 28.0052639570785 21.56872669602335 24 23.26550583788891 26.950462306809747 28.70857798474725 21.075453870554092 25 22.297958495022776 28.621562341825545 27.884258478150837 21.196220685000846 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.0 2 7.5 3 13.0 4 13.0 5 13.0 6 35.5 7 58.0 8 58.0 9 58.0 10 73.5 11 89.0 12 89.0 13 89.0 14 141.0 15 193.0 16 193.0 17 193.0 18 365.0 19 537.0 20 537.0 21 537.0 22 951.5 23 1366.0 24 1366.0 25 1366.0 26 2143.0 27 2920.0 28 2920.0 29 2920.0 30 3952.5 31 4985.0 32 4985.0 33 4985.0 34 5451.5 35 5918.0 36 5918.0 37 5918.0 38 6508.0 39 7098.0 40 7098.0 41 7098.0 42 7402.0 43 7706.0 44 7706.0 45 7706.0 46 7940.5 47 8175.0 48 8175.0 49 8175.0 50 7486.0 51 6797.0 52 6797.0 53 6797.0 54 5812.5 55 4828.0 56 4828.0 57 4828.0 58 4061.0 59 3294.0 60 3294.0 61 3294.0 62 2753.0 63 2212.0 64 2212.0 65 2212.0 66 1697.0 67 1182.0 68 1182.0 69 1182.0 70 945.5 71 709.0 72 709.0 73 709.0 74 617.0 75 525.0 76 525.0 77 525.0 78 448.0 79 371.0 80 371.0 81 371.0 82 272.5 83 174.0 84 174.0 85 174.0 86 139.0 87 104.0 88 104.0 89 104.0 90 56.5 91 9.0 92 9.0 93 9.0 94 5.5 95 2.0 96 2.0 97 2.0 98 21.5 99 41.0 100 41.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.010116679031496593 5 0.026977810750657583 6 0.059013961017063465 7 0.07756120590814056 8 0.08936399811155324 9 0.09779456397113373 10 0.10959735617454643 11 0.10622512983071423 12 0.10622512983071423 13 0.10116679031496593 14 0.09442233762730154 15 0.09948067714304984 16 0.09610845079921763 17 0.09779456397113373 18 0.08430565859580494 19 0.06744452687664396 20 0.06913064004856005 21 0.07081675322047616 22 0.07756120590814056 23 0.06238618736089566 24 0.06744452687664396 25 0.06407230053281177 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 59308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.66641937006812 #Duplication Level Percentage of deduplicated Percentage of total 1 64.37212592854617 30.683887502529174 2 16.74566678457729 15.964119511701625 3 7.435443933498408 10.63262966210292 4 3.80969225327202 7.263775544614555 5 2.3735408560311284 5.656909691778512 6 1.3371064732932436 3.8241046739057127 7 0.9939865581888928 3.3165846091589666 8 0.5978068623983022 2.279625008430566 9 0.4633887513264945 1.9879274296890805 >10 1.7792713123452424 13.556349902205437 >50 0.056597099398655815 1.888446752546031 >100 0.035373187124159884 2.945639711337425 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 326 0.5496728940446483 No Hit CTTTAGGACGTGAAATATGGCGAGG 259 0.4367033115262696 No Hit GTCCTACAGTGGACATTTCTAAATT 230 0.38780602954070276 No Hit CTGTAGGACGTGGAATATGGCAAGA 202 0.34059486072705203 No Hit CTGTAGGACATGGAATATGGCAAGA 140 0.23605584406825386 No Hit GTCCTTCAGTGTGCATTTCTCATTT 134 0.22593916503675726 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 127 0.21413637283334458 No Hit GTATCAACGCAGAGTACTTTTTTTT 111 0.187158562082687 No Hit CTGAAGGACCTGGAATATGGCGAGA 110 0.1854724489107709 No Hit ATTTAGAAATGTCCACTGTAGGACG 108 0.1821002225669387 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 93 0.1568085249881972 No Hit GTCCTACAGTGTGCATTTCTCATTT 93 0.1568085249881972 No Hit TTTCTAAATTTTCCACCTTTTTCAG 90 0.15175018547244892 No Hit GAATATGGCAAGAAAACTGAAAATC 87 0.14669184595670062 No Hit GGAATATGGCGAGAAAACTGAAAAT 85 0.1433196196128684 No Hit TATCAACGCAGAGTACTTTTTTTTT 77 0.1298307142375396 No Hit GTCCTACAGTGGACATTTCTAAATA 73 0.12308626154987523 No Hit CCATATTCCAGGTCCTTCAGTGTGC 66 0.11128346934646254 No Hit GAAATATGGCGAGGAAAACTGAAAA 60 0.10116679031496593 No Hit CCATATTTCACGTCCTAAAGTGTGT 60 0.10116679031496593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.001686113171916099 0.0 8 0.0 0.0 0.0 0.001686113171916099 0.0 9 0.0 0.0 0.0 0.001686113171916099 0.0 10 0.0 0.0 0.0 0.001686113171916099 0.0 11 0.0 0.0 0.0 0.001686113171916099 0.0 12 0.0 0.0 0.0 0.001686113171916099 0.0 13 0.0 0.0 0.0 0.001686113171916099 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 25 0.005959111 19.003382 4 GGTATCA 30 7.637685E-4 18.98733 1 CCTTTTT 45 6.618391E-4 14.780408 16 TCCACCT 45 6.618391E-4 14.780408 12 GTATCAA 125 0.0 14.430372 1 GTCCTAC 100 6.1118044E-10 14.240499 1 CCTACAG 110 1.6916601E-10 13.820641 3 TTCCACC 50 0.001468058 13.302368 11 CTGTAGG 100 9.440555E-9 13.291132 1 TCCTACA 115 3.45608E-10 13.208578 2 GTCCTAA 65 5.3150503E-5 13.145076 1 TTTTCAG 60 4.0122427E-4 12.65822 19 TGTAGGA 120 6.8030204E-10 12.65822 2 GTGGAAT 70 1.0553614E-4 12.216459 10 GGACGTG 125 1.2787496E-9 12.162164 6 CCACCTT 55 0.0030048832 12.0930605 13 ACCTTTT 55 0.0030048832 12.0930605 15 GTAGGAC 110 3.5361154E-8 12.0930605 3 CTTTTTC 55 0.0030048832 12.0930605 17 GGCAAGA 120 9.304131E-9 11.867082 19 >>END_MODULE