##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061993_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 59308 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.165070479530588 32.0 32.0 32.0 32.0 32.0 2 31.53478451473663 32.0 32.0 32.0 32.0 32.0 3 31.608450799217643 32.0 32.0 32.0 32.0 32.0 4 31.644196398462263 32.0 32.0 32.0 32.0 32.0 5 31.62399676266271 32.0 32.0 32.0 32.0 32.0 6 35.26325284953126 36.0 36.0 36.0 36.0 36.0 7 35.2741114183584 36.0 36.0 36.0 36.0 36.0 8 35.22504552505564 36.0 36.0 36.0 36.0 36.0 9 35.3316584609159 36.0 36.0 36.0 36.0 36.0 10 35.207864031833815 36.0 36.0 36.0 36.0 36.0 11 35.308811627436434 36.0 36.0 36.0 36.0 36.0 12 35.26256154313077 36.0 36.0 36.0 36.0 36.0 13 35.27947325824509 36.0 36.0 36.0 36.0 36.0 14 35.246830107236796 36.0 36.0 36.0 36.0 36.0 15 35.2062622243205 36.0 36.0 36.0 36.0 36.0 16 35.26792338301747 36.0 36.0 36.0 36.0 36.0 17 35.24881972077966 36.0 36.0 36.0 36.0 36.0 18 35.215148040736494 36.0 36.0 36.0 36.0 36.0 19 35.205031361705 36.0 36.0 36.0 36.0 36.0 20 35.21270317663721 36.0 36.0 36.0 36.0 36.0 21 35.18650097794564 36.0 36.0 36.0 36.0 36.0 22 35.16380589465165 36.0 36.0 36.0 36.0 36.0 23 35.14122883927969 36.0 36.0 36.0 36.0 36.0 24 35.13360760774263 36.0 36.0 36.0 36.0 36.0 25 35.06854050043839 36.0 36.0 36.0 36.0 36.0 26 35.05815404329939 36.0 36.0 36.0 36.0 36.0 27 34.99371079786875 36.0 36.0 36.0 36.0 36.0 28 34.981250421528294 36.0 36.0 36.0 36.0 36.0 29 34.90690969177851 36.0 36.0 36.0 36.0 36.0 30 34.86202535914211 36.0 36.0 36.0 32.0 36.0 31 34.87190598232954 36.0 36.0 36.0 32.0 36.0 32 34.7741114183584 36.0 36.0 36.0 32.0 36.0 33 34.79662102920348 36.0 36.0 36.0 32.0 36.0 34 34.8026235920955 36.0 36.0 36.0 32.0 36.0 35 34.75328792068524 36.0 36.0 36.0 32.0 36.0 36 34.699028798812975 36.0 36.0 36.0 32.0 36.0 37 34.638851419707294 36.0 36.0 36.0 32.0 36.0 38 34.63446752546031 36.0 36.0 36.0 32.0 36.0 39 34.47460713563094 36.0 36.0 36.0 32.0 36.0 40 34.575453564443244 36.0 36.0 36.0 32.0 36.0 41 34.55363525999865 36.0 36.0 36.0 32.0 36.0 42 34.541680717609765 36.0 36.0 36.0 32.0 36.0 43 34.579921764348825 36.0 36.0 36.0 32.0 36.0 44 34.469666824037226 36.0 36.0 36.0 32.0 36.0 45 34.44181223443717 36.0 36.0 36.0 32.0 36.0 46 34.35956363391111 36.0 36.0 36.0 32.0 36.0 47 34.35474135023943 36.0 36.0 36.0 32.0 36.0 48 34.34674917380455 36.0 36.0 36.0 32.0 36.0 49 34.25129830714238 36.0 36.0 36.0 32.0 36.0 50 33.87232751062251 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 2.0 22 6.0 23 13.0 24 31.0 25 69.0 26 149.0 27 264.0 28 493.0 29 858.0 30 1301.0 31 1875.0 32 2762.0 33 4623.0 34 10171.0 35 36691.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.601639316614104 20.06476312549542 13.556406321150893 26.777191236739583 2 13.702510834190512 20.442473399322125 41.734819486366625 24.120196280120737 3 17.316382275578338 24.517771632831995 30.32980373642679 27.836042355162878 4 11.661158696971741 17.97733863896945 37.912254670533486 32.449247993525326 5 12.522762527820866 38.39954137721724 35.01888446752546 14.058811627436432 6 31.371821676670937 37.21420381736022 18.838942469818573 12.575032036150265 7 28.991029877925406 31.558980238753627 21.612598637620557 17.837391245700413 8 25.17704188305119 38.10447157213192 19.49484049369394 17.22364605112295 9 26.81088554663789 15.62015242463074 19.874215957375057 37.69474607135631 10 16.136103055237065 28.716193430903083 33.87569973696635 21.272003776893506 11 33.634585553382344 21.54684022391583 25.95939839482026 18.859175827881565 12 25.925676131381937 23.88885141970729 30.845754367033116 19.339718081877656 13 29.483374924124906 22.784447292102247 24.967963849733593 22.764213934039255 14 21.0511229513725 22.76590004721117 26.57820192891347 29.604775072502864 15 21.730626559654684 33.55871046064612 22.110002023335806 22.60066095636339 16 20.398597153840967 27.43306130707493 29.515411074391313 22.65293046469279 17 20.865650502461726 29.545761111485803 28.33681796722196 21.251770418830514 18 21.039320159169083 26.738382680245497 31.606191407567273 20.616105753018143 19 23.860187495784718 26.134754164699537 27.716328319956833 22.288730019558916 20 25.185472448910772 27.601672624266545 27.67923383017468 19.53362109664801 21 23.416739731570782 26.256154313077495 25.82450934106697 24.502596614284748 22 24.677952384164026 29.169757874148512 26.148243070074862 20.0040466716126 23 21.65812369326229 29.272610777635393 27.635394887704862 21.43387064139745 24 23.612328859513052 26.900249544749443 28.222162271531666 21.26525932420584 25 22.87718351655763 28.227220611047414 28.001281446010655 20.8943144263843 26 20.12038848047481 29.001146556956904 28.84265191879679 22.035813043771498 27 21.261887097862008 29.464827679233828 27.240844405476494 22.032440817427666 28 21.216719780127136 28.440150403830916 27.376195052860542 22.966934763181413 29 22.616217309929688 27.52288937224948 26.27008616183587 23.59080715598496 30 20.74256424091185 27.458353004653674 28.097389896809872 23.701692857624604 31 23.291967356848993 26.227490389154923 27.39428070412086 23.08626154987523 32 21.71376542793552 28.63357388547919 27.88325352397653 21.769407162608754 33 21.125311930936803 28.66392392257368 29.84251702974304 20.368247116746478 34 22.228029945369933 28.083900991434547 29.34342753085587 20.34464153233965 35 21.100376009577285 29.30514104574502 28.074257676159643 21.52022526851805 36 20.879139407837055 27.834356241990964 29.080393876036958 22.206110474135023 37 21.061239630403993 28.992715991097324 26.453429554191676 23.492614824307008 38 22.115060362851555 29.680650165239093 27.082349767316384 21.121939704592975 39 23.528419916704603 27.49253882341039 27.033908307619676 21.945132952265332 40 24.293518580967156 26.266270992108993 28.80387131584272 20.636339111081135 41 23.117001365774698 26.68319085436795 28.64923196250021 21.550575817357142 42 22.03524154793019 27.972346345164826 28.68223589916533 21.31017620773965 43 20.95199554858617 29.1331546023235 28.344040332507127 21.570809516583203 44 20.42794995447341 28.238289549118136 28.19613529828348 23.13762519812498 45 21.30909826667566 28.78195184460781 27.12281648344237 22.78613340527416 46 21.728940446482767 27.07560531462872 27.965873069400416 23.229581169488096 47 23.177311661158697 26.90193565792136 27.900114655695692 22.020638025224255 48 20.589822277678483 28.548544835261186 27.449161973493407 23.412470913566924 49 22.669252170980524 26.857769159430067 27.925132788129165 22.547845881460248 50 21.798806191616364 29.474252183590195 26.707247158803494 22.01969446598995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.5 4 5.0 5 3.5 6 2.0 7 4.5 8 7.0 9 8.5 10 10.0 11 13.0 12 16.0 13 32.5 14 49.0 15 74.5 16 100.0 17 107.0 18 114.0 19 116.0 20 118.0 21 175.0 22 232.0 23 269.5 24 307.0 25 399.0 26 491.0 27 671.5 28 852.0 29 1182.5 30 1513.0 31 2039.0 32 2565.0 33 3188.5 34 3812.0 35 4503.5 36 5195.0 37 5070.0 38 4945.0 39 4561.0 40 4177.0 41 4077.5 42 3978.0 43 3889.0 44 3800.0 45 3828.5 46 3857.0 47 3876.5 48 3896.0 49 3725.5 50 3555.0 51 3348.0 52 3141.0 53 3073.5 54 3006.0 55 2691.0 56 2376.0 57 2085.5 58 1795.0 59 1517.5 60 1240.0 61 1010.0 62 780.0 63 656.5 64 533.0 65 531.5 66 530.0 67 438.0 68 346.0 69 359.5 70 373.0 71 326.5 72 280.0 73 283.5 74 287.0 75 285.0 76 283.0 77 263.5 78 244.0 79 221.0 80 198.0 81 186.0 82 174.0 83 118.5 84 63.0 85 49.5 86 36.0 87 24.0 88 12.0 89 7.5 90 3.0 91 2.0 92 1.0 93 2.0 94 3.0 95 3.5 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025291697578741484 2 0.008430565859580495 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.001686113171916099 29 0.001686113171916099 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.001686113171916099 36 0.0 37 0.0 38 0.0 39 0.001686113171916099 40 0.0 41 0.001686113171916099 42 0.005058339515748297 43 0.001686113171916099 44 0.003372226343832198 45 0.0 46 0.0 47 0.0 48 0.003372226343832198 49 0.005058339515748297 50 0.003372226343832198 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 59308.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.972617522088086 #Duplication Level Percentage of deduplicated Percentage of total 1 67.18973803991469 35.59216294597694 2 15.781264920266096 16.719498212720037 3 6.830696756533087 10.855196600795844 4 3.501289110990865 7.418897956430835 5 2.0912244962918165 5.5388817697443855 6 1.2922939809657192 4.107371686787617 7 0.8594073272432122 3.186753894921427 8 0.6238660597765541 2.6438254535644434 9 0.4074227329153007 1.942402374047346 >10 1.3941496641945443 10.907466109125243 >50 0.025463920807206292 0.9138733391785256 >100 0.0031829901009007865 0.17366965670735818 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 103 0.17366965670735818 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 97 0.1635529776758616 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 92 0.1551224118162811 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 65 0.10959735617454643 No Hit CCCCAGAACCATGCAATGCAAGAATTGTCCATGAAACCACAGCCTTGGAA 61 0.10285290348688203 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 61 0.10285290348688203 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.001686113171916099 0.0 8 0.0 0.0 0.0 0.001686113171916099 0.0 9 0.0 0.0 0.0 0.001686113171916099 0.0 10 0.0 0.0 0.0 0.001686113171916099 0.0 11 0.0 0.0 0.0 0.001686113171916099 0.0 12 0.0 0.0 0.0 0.001686113171916099 0.0 13 0.0 0.0 0.0 0.001686113171916099 0.0 14 0.0 0.0 0.0 0.001686113171916099 0.0 15 0.0 0.0 0.0 0.001686113171916099 0.0 16 0.0 0.0 0.0 0.001686113171916099 0.0 17 0.0 0.0 0.0 0.001686113171916099 0.0 18 0.0 0.0 0.0 0.001686113171916099 0.0 19 0.0 0.0 0.0 0.001686113171916099 0.0 20 0.0 0.0 0.0 0.001686113171916099 0.0 21 0.0 0.0 0.0 0.001686113171916099 0.0 22 0.0 0.0 0.0 0.001686113171916099 0.0 23 0.0 0.0 0.0 0.001686113171916099 0.0 24 0.0 0.0 0.0 0.001686113171916099 0.0 25 0.0 0.0 0.0 0.001686113171916099 0.0 26 0.0 0.0 0.0 0.001686113171916099 0.0 27 0.0 0.0 0.0 0.001686113171916099 0.0 28 0.0 0.0 0.0 0.001686113171916099 0.0 29 0.0 0.0 0.0 0.003372226343832198 0.0 30 0.0 0.0 0.0 0.005058339515748297 0.0 31 0.0 0.0 0.0 0.013488905375328791 0.0 32 0.0 0.0 0.0 0.021919471234909286 0.0 33 0.0 0.0 0.0 0.03372226343832198 0.0 34 0.0 0.0 0.0 0.042152829297902476 0.0 35 0.0 0.0 0.0 0.053955621501315165 0.0 36 0.0 0.0 0.0 0.07250286639239226 0.0 37 0.0 0.0 0.0 0.09105011128346935 0.0 38 0.0 0.0 0.0 0.12645848789370742 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 35 1.4152647E-7 44.0 1 GTGGAAA 55 4.857475E-6 28.0 39 AAATTTA 65 5.7729085E-7 27.076921 44 GAAATGT 65 5.7729085E-7 27.076921 6 ATTTAGA 65 5.7729085E-7 27.076921 1 AAATGTC 60 9.550553E-6 25.666666 7 ATGTCCA 70 1.1022075E-6 25.142859 9 TTTAGAA 80 1.2665623E-7 24.75 2 AATGTCC 65 1.7759758E-5 23.692307 8 GTATCAA 95 2.5778718E-8 23.157894 1 TTAGAAA 80 3.5205449E-6 22.0 3 TAGAAAT 80 3.5205449E-6 22.0 4 ATGGGAG 60 2.8284267E-4 22.0 5 GGCGAGG 100 4.4397893E-8 22.0 19 AGGTGGA 90 3.948262E-7 22.0 37 GCGAGGA 100 4.4397893E-8 22.0 20 CGAGGAA 105 7.438939E-8 20.952381 21 AAAAGGT 95 6.642713E-7 20.842106 34 GGTGGAA 95 6.642713E-7 20.842106 38 TCTCGCC 65 4.8565376E-4 20.307692 43 >>END_MODULE