##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061992_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7247471 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29082406814736 32.0 32.0 32.0 32.0 32.0 2 30.812631330294387 32.0 32.0 32.0 32.0 32.0 3 30.83078856058893 32.0 32.0 32.0 32.0 32.0 4 30.844663331526267 32.0 32.0 32.0 32.0 32.0 5 30.74765018031807 32.0 32.0 32.0 32.0 32.0 6 34.42061858543484 36.0 36.0 36.0 32.0 36.0 7 34.35192041472122 36.0 36.0 36.0 32.0 36.0 8 34.3145199201211 36.0 36.0 36.0 32.0 36.0 9 34.45416670173637 36.0 36.0 36.0 32.0 36.0 10 34.12839002736265 36.0 36.0 36.0 32.0 36.0 11 34.43060910488638 36.0 36.0 36.0 32.0 36.0 12 34.241485340196604 36.0 36.0 36.0 32.0 36.0 13 34.33871815423615 36.0 36.0 36.0 32.0 36.0 14 34.23814693428922 36.0 36.0 36.0 32.0 36.0 15 34.18002859204266 36.0 36.0 36.0 32.0 36.0 16 34.18840227163379 36.0 36.0 36.0 32.0 36.0 17 34.11211303915531 36.0 36.0 36.0 32.0 36.0 18 34.12832241757159 36.0 36.0 36.0 32.0 36.0 19 34.13078893313268 36.0 36.0 36.0 32.0 36.0 20 34.11580301597619 36.0 36.0 36.0 32.0 36.0 21 34.09693533095889 36.0 36.0 36.0 32.0 36.0 22 34.065847245197666 36.0 36.0 36.0 32.0 36.0 23 34.035303487244036 36.0 36.0 36.0 32.0 36.0 24 34.00925674624983 36.0 36.0 36.0 32.0 36.0 25 33.6591488258456 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 104.0 5 560.0 6 1539.0 7 321.0 8 1299.0 9 1047.0 10 509.0 11 143.0 12 303.0 13 305.0 14 799.0 15 1196.0 16 1968.0 17 2763.0 18 4066.0 19 5650.0 20 8643.0 21 13061.0 22 20245.0 23 29687.0 24 42885.0 25 60645.0 26 83074.0 27 107332.0 28 143097.0 29 189356.0 30 248999.0 31 339220.0 32 482030.0 33 687644.0 34 1512694.0 35 3256282.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.25192875906221 17.149722259246964 11.930599720782856 25.667749260907975 2 17.379531093069826 19.321027489527008 36.4664486865796 26.83299273082357 3 19.516146057191268 23.062904324081554 27.1978844929275 30.223065125799682 4 13.385619998683543 15.455177841221065 34.228423712420394 36.930778447674996 5 16.078293183425252 35.52176108868867 32.074902142492455 16.325043585393622 6 35.53486563726085 33.738948881644006 16.57075787756121 14.155427603533926 7 31.79589522922337 29.18251013595271 19.911248946070874 19.110345688753043 8 29.05243063373424 31.564327222849187 18.931952200920783 20.45128994249579 9 27.30566486681831 14.861582608508256 18.443605933504063 39.38914659116937 10 17.437108252090358 25.865966154693847 29.29143488435777 27.405490708858025 11 37.51072061163757 21.15680494753032 21.548115044615844 19.78435939621626 12 25.779112445779113 23.035305837238205 27.282202837758398 23.90337887922429 13 29.302364843627927 19.195131686218847 24.803924426576778 26.698579043576448 14 24.511280127376462 19.417989798058134 23.98064156251114 32.090088512054265 15 25.7799661610536 26.652536249204523 21.295020844691507 26.272476745050373 16 26.805335828050204 25.31222181024274 22.710506931846375 25.171935429860675 17 24.894390256908878 25.6528960237576 24.12807894295485 25.324634776378673 18 25.734504619554144 24.458006156642842 25.0760049092907 24.731484314512315 19 26.31989004904342 24.51190341199055 24.227288880503746 24.940917658462286 20 26.62633332131785 23.723821270964425 23.656645065041733 25.993200342675994 21 27.610469457820503 23.69419385293554 23.486494575083793 25.208842114160163 22 26.92082710915805 23.5334807107542 24.028597020821376 25.517095159266372 23 24.99160383351286 23.789239649791476 24.78190681359958 26.43724970309609 24 25.42236505648959 24.363933672296177 24.44987822335225 25.763823047861983 25 25.4918016033304 23.953131421828804 24.281169485458218 26.273897489382573 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 362.0 1 362.0 2 986.5 3 1611.0 4 1611.0 5 1611.0 6 3063.5 7 4516.0 8 4516.0 9 4516.0 10 5405.5 11 6295.0 12 6295.0 13 6295.0 14 8446.5 15 10598.0 16 10598.0 17 10598.0 18 18336.5 19 26075.0 20 26075.0 21 26075.0 22 46475.5 23 66876.0 24 66876.0 25 66876.0 26 105533.5 27 144191.0 28 144191.0 29 144191.0 30 189278.5 31 234366.0 32 234366.0 33 234366.0 34 314339.5 35 394313.0 36 394313.0 37 394313.0 38 475094.0 39 555875.0 40 555875.0 41 555875.0 42 653534.5 43 751194.0 44 751194.0 45 751194.0 46 845920.0 47 940646.0 48 940646.0 49 940646.0 50 978440.5 51 1016235.0 52 1016235.0 53 1016235.0 54 960422.0 55 904609.0 56 904609.0 57 904609.0 58 843548.5 59 782488.0 60 782488.0 61 782488.0 62 692199.5 63 601911.0 64 601911.0 65 601911.0 66 493157.5 67 384404.0 68 384404.0 69 384404.0 70 292902.0 71 201400.0 72 201400.0 73 201400.0 74 153367.5 75 105335.0 76 105335.0 77 105335.0 78 86056.0 79 66777.0 80 66777.0 81 66777.0 82 46730.5 83 26684.0 84 26684.0 85 26684.0 86 19613.0 87 12542.0 88 12542.0 89 12542.0 90 8488.0 91 4434.0 92 4434.0 93 4434.0 94 2695.5 95 957.0 96 957.0 97 957.0 98 1867.0 99 2777.0 100 2777.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.968645752428675E-4 2 2.759583308439592E-4 3 4.967249955191266E-4 4 0.010403629072817264 5 0.03446719552241051 6 0.06418790775430491 7 0.1089345511006529 8 0.11039713025412588 9 0.12022124683217082 10 0.1340743550405376 11 0.14134585705827593 12 0.1340605571239954 13 0.1285689863402006 14 0.11668898019736816 15 0.1332464800480057 16 0.12013845933291764 17 0.12458138845950541 18 0.11225984898732262 19 0.09868269910979982 20 0.09399140748545251 21 0.09263921166431711 22 0.1042570573928478 23 0.08376715132768382 24 0.09321872415908942 25 0.09027976793560126 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 7247471.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.047544179388424 #Duplication Level Percentage of deduplicated Percentage of total 1 66.80495030275408 24.081543974403758 2 15.737223400829167 11.345765116045897 3 6.7151352749304225 7.261924064808722 4 3.3139588374330216 4.7784031040416615 5 1.9376256403199625 3.4923322936274817 6 1.1879001202481771 2.5692529239208195 7 0.7942259340304311 2.0040926111764596 8 0.566964073688007 1.6350129995515574 9 0.4231533313432472 1.3728274565625984 >10 2.2507863415436393 14.652664159544438 >50 0.15248968099376062 3.7883905874668264 >100 0.08738268731484816 6.2899447471234184 >500 0.01289351922706645 3.277544907673206 >1k 0.014006170929387057 10.17530657957221 >5k 0.0012663113439156917 3.1351612292430824 >10k+ 3.837307102774823E-5 0.13983324523791346 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGT 10109 0.1394831383250792 No Hit GCGCAAGACGGACCAGAGCGAAAGC 9725 0.13418473837287517 No Hit ATCAGATACCGTCGTAGTTCCGACC 9518 0.1313285696486402 No Hit GATTAAGAGGGACGGCCGGGGGCAT 9370 0.1292864780003949 No Hit GGGTAGGCACACGCTGAGCCAGTCA 9339 0.12885874258758676 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 9259 0.12775490926421093 No Hit TCGTAGTTCCGACCATAAACGATGC 9040 0.12473316554146958 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 8233 0.1135982468919158 No Hit GTATCTGATCGTCTTCGAACCTCCG 8139 0.1123012427369492 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 7740 0.10679587403661223 No Hit GAACTACGACGGTATCTGATCGTCT 7690 0.10610597820950231 No Hit GTACATGGGGAATAATTGCAATCCC 7456 0.102877265738628 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1038333233758369E-4 2 0.0 0.0 0.0 0.0 1.1038333233758369E-4 3 0.0 0.0 0.0 0.0 1.1038333233758369E-4 4 0.0 0.0 0.0 0.0 1.2418124887978165E-4 5 2.759583308439592E-5 0.0 0.0 0.0 1.3797916542197962E-4 6 2.759583308439592E-5 0.0 0.0 0.0 2.2076666467516737E-4 7 5.519166616879184E-5 0.0 0.0 0.0 2.2076666467516737E-4 8 5.519166616879184E-5 0.0 0.0 0.0 2.3456458121736535E-4 9 5.519166616879184E-5 0.0 0.0 0.0 2.6216041430176124E-4 10 5.519166616879184E-5 0.0 0.0 6.898958271098981E-5 3.0355416392835514E-4 11 5.519166616879184E-5 0.0 0.0 6.898958271098981E-5 3.0355416392835514E-4 12 6.898958271098981E-5 0.0 0.0 8.278749925318776E-5 6.760979105677001E-4 13 6.898958271098981E-5 0.0 0.0 1.1038333233758369E-4 8.002791594474818E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2345 0.0 13.848795 1 GTATCAA 7805 0.0 13.455844 1 CGAACGA 615 0.0 12.048535 16 TCGCGTA 1100 0.0 12.006623 9 GCGTAAC 1160 0.0 11.549573 11 CGCGTAA 1145 0.0 11.534668 10 ACGGTAT 1370 0.0 10.958101 9 CCGACCA 2100 0.0 10.949514 9 CGACCAT 2070 0.0 10.9245205 10 CGGTCCA 1420 0.0 10.639092 10 CGGACCA 1805 0.0 10.58078 9 CGGACAT 1220 0.0 10.435439 5 CGTCGTA 1785 0.0 10.379877 10 CGGTTCT 2025 0.0 10.36898 12 GGTTCTA 2080 0.0 10.322547 13 CCGTCGT 1765 0.0 10.282233 9 CGCATCG 1250 0.0 10.260429 13 ACGAACG 715 0.0 10.231055 15 GACCATA 2190 0.0 10.065808 11 TCCGATA 765 0.0 10.060148 8 >>END_MODULE