##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061992_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7247471 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330693975871032 32.0 32.0 32.0 32.0 32.0 2 31.47497892713196 32.0 32.0 32.0 32.0 32.0 3 31.58385359527482 32.0 32.0 32.0 32.0 32.0 4 31.659549103404483 32.0 32.0 32.0 32.0 32.0 5 31.631481381574346 32.0 32.0 32.0 32.0 32.0 6 35.288650620333634 36.0 36.0 36.0 36.0 36.0 7 35.287667104842505 36.0 36.0 36.0 36.0 36.0 8 35.24369424865584 36.0 36.0 36.0 36.0 36.0 9 35.32254727200702 36.0 36.0 36.0 36.0 36.0 10 35.206495479595574 36.0 36.0 36.0 36.0 36.0 11 35.32564545618741 36.0 36.0 36.0 36.0 36.0 12 35.243452371178854 36.0 36.0 36.0 36.0 36.0 13 35.283358981360536 36.0 36.0 36.0 36.0 36.0 14 35.242710733164714 36.0 36.0 36.0 36.0 36.0 15 35.21906827912799 36.0 36.0 36.0 36.0 36.0 16 35.23031427100571 36.0 36.0 36.0 36.0 36.0 17 35.20903153665603 36.0 36.0 36.0 36.0 36.0 18 35.208688934388285 36.0 36.0 36.0 36.0 36.0 19 35.200979348520335 36.0 36.0 36.0 36.0 36.0 20 35.20017451604843 36.0 36.0 36.0 36.0 36.0 21 35.19063063515535 36.0 36.0 36.0 36.0 36.0 22 35.179666396733424 36.0 36.0 36.0 36.0 36.0 23 35.144637763986914 36.0 36.0 36.0 36.0 36.0 24 35.12796891494978 36.0 36.0 36.0 36.0 36.0 25 35.11203025165606 36.0 36.0 36.0 36.0 36.0 26 35.07041504546896 36.0 36.0 36.0 36.0 36.0 27 35.058481641389115 36.0 36.0 36.0 36.0 36.0 28 35.0367006642731 36.0 36.0 36.0 36.0 36.0 29 35.01821863102315 36.0 36.0 36.0 36.0 36.0 30 34.998764672531976 36.0 36.0 36.0 36.0 36.0 31 35.00578215490617 36.0 36.0 36.0 36.0 36.0 32 34.982543979824136 36.0 36.0 36.0 36.0 36.0 33 34.959271723888236 36.0 36.0 36.0 36.0 36.0 34 34.950500802279855 36.0 36.0 36.0 36.0 36.0 35 34.936388155261334 36.0 36.0 36.0 36.0 36.0 36 34.91932496176942 36.0 36.0 36.0 32.0 36.0 37 34.908544925533334 36.0 36.0 36.0 32.0 36.0 38 34.88677609058387 36.0 36.0 36.0 32.0 36.0 39 34.88272943762038 36.0 36.0 36.0 32.0 36.0 40 34.86530791223587 36.0 36.0 36.0 32.0 36.0 41 34.843884163179126 36.0 36.0 36.0 32.0 36.0 42 34.81002807738037 36.0 36.0 36.0 32.0 36.0 43 34.81831814159725 36.0 36.0 36.0 32.0 36.0 44 34.76816326688303 36.0 36.0 36.0 32.0 36.0 45 34.76366845759024 36.0 36.0 36.0 32.0 36.0 46 34.75485683212806 36.0 36.0 36.0 32.0 36.0 47 34.73482763849624 36.0 36.0 36.0 32.0 36.0 48 34.710288871800934 36.0 36.0 36.0 32.0 36.0 49 34.704091399606845 36.0 36.0 36.0 32.0 36.0 50 34.2927895813588 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 18.0 20 52.0 21 190.0 22 456.0 23 1294.0 24 3244.0 25 7774.0 26 16124.0 27 30828.0 28 52830.0 29 84780.0 30 127511.0 31 189866.0 32 290119.0 33 500918.0 34 1176072.0 35 4765392.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.840353671564664 17.69176303011398 12.346124436518826 26.12175886180253 2 16.746116695020486 19.83305628048024 36.18427089518267 27.236556129316597 3 18.786804303966605 23.494222936772 27.50972962367198 30.209243135589407 4 13.055992374717299 15.856652853568603 34.37044021850939 36.71691455320471 5 15.734373512411917 35.88270113570667 31.898979919889285 16.48394543199213 6 35.61268852986957 33.90836705664702 16.4349187763601 14.0440256371233 7 31.81079303387347 29.216067232280057 19.894939903864397 19.078199829982072 8 29.142786497524447 31.646418454106268 18.803524705376535 20.40727034299275 9 27.444883877424274 14.584039039273147 18.388662748702274 39.5824143346003 10 17.444294997532932 25.88795197878872 29.271618320560126 27.396134703118225 11 37.81049969016778 21.00320235845028 21.501307145623624 19.68499080575831 12 25.76658809673057 22.995759486309087 27.291188885060734 23.94646353189961 13 29.43247375532789 19.040490124072246 24.861927698641363 26.6651084219585 14 24.58188518450091 19.250094274264775 23.959433573449278 32.20858696778504 15 25.841234825223864 26.609751180791203 21.262437614445094 26.286576379539845 16 26.946902367917534 25.21399675443258 22.63132702479212 25.207773852857766 17 25.0315454866946 25.641661760357508 23.997433035606488 25.329359717341397 18 25.88723497611577 24.31377337715558 25.08528505159049 24.713706595138156 19 26.453452032226423 24.352277415429107 24.23985197593091 24.954418576413563 20 26.81336564079306 23.544311936517246 23.68844541024021 25.95387701244948 21 27.793730473355595 23.603067498460497 23.450766053638862 25.152435974545046 22 26.99468545648544 23.460252548785636 24.05098274970676 25.49407924502216 23 25.06240108617214 23.636648375226113 24.82867814561495 26.472272392986795 24 25.572746541071332 24.246119610017548 24.451393140411813 25.729740708499303 25 25.686179276849096 23.732912955591274 24.37215848332862 26.208749284231004 26 25.497310427758237 24.918443559686978 24.601503842393896 24.98274217016089 27 26.1415636002179 23.995519513957227 24.1037786094598 25.75913827636508 28 25.52396422083339 24.045422972768236 24.67597103822558 25.754641768172792 29 25.352200516762206 24.211631316683945 24.763095462476787 25.673072704077054 30 25.218386087865518 24.36558029111522 25.027406489884402 25.38862713113486 31 26.20649859902236 24.097891682841347 23.77223181871555 25.923377899420746 32 25.99042415210972 23.970182410243673 23.671620167232387 26.36777327041422 33 25.243620136238242 23.806825323827645 24.49186617474199 26.457688365192123 34 26.19738011848895 24.01081100920368 24.40765529614855 25.38415357615882 35 26.60541660934765 23.612170296058654 24.66213974047972 25.12027335411398 36 25.207959035585013 24.532853643503564 24.14867772313642 26.110509597775 37 26.428428519587104 24.160930102920094 24.143213331180828 25.267428046311974 38 25.513768871927876 23.85241693274799 24.495413641530956 26.13840055379318 39 26.470065534937063 23.717421563941546 23.885011960098417 25.927500941022974 40 26.419755437178498 24.1120099543799 24.283242287680533 25.184992320761072 41 25.27758966402792 24.812332387889263 24.637552177418954 25.272525770663854 42 26.873082086391957 24.48104650487303 24.057748077757093 24.58812333097792 43 26.192487151907944 23.558264346777406 24.302042793167278 25.94720570814737 44 25.57751540395239 24.289329097746624 23.93163065396874 26.20152484433225 45 25.747567692795297 24.480260818559977 24.070137762325665 25.702033726319062 46 25.520554279145557 24.361643602748213 24.16092121187368 25.95688090623255 47 25.750044084933382 24.012531987448142 24.70723878745598 25.53018514016249 48 26.556878857356065 24.724348409701303 23.501433382750175 25.217339350192457 49 25.667303925593178 24.79208133916824 23.606338185102217 25.934276550136364 50 25.940195252030705 24.823745945242614 23.78030262367588 25.4557561790508 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 65.0 1 63.0 2 61.0 3 173.0 4 285.0 5 326.5 6 368.0 7 337.0 8 306.0 9 426.5 10 547.0 11 887.0 12 1227.0 13 2168.5 14 3110.0 15 4263.0 16 5416.0 17 5467.5 18 5519.0 19 5747.0 20 5975.0 21 6914.0 22 7853.0 23 9940.0 24 12027.0 25 16140.0 26 20253.0 27 26659.0 28 33065.0 29 42113.5 30 51162.0 31 63863.5 32 76565.0 33 92208.0 34 107851.0 35 129179.5 36 150508.0 37 186674.0 38 222840.0 39 253048.5 40 283257.0 41 317901.0 42 352545.0 43 368723.5 44 384902.0 45 427736.0 46 470570.0 47 510481.0 48 550392.0 49 579078.0 50 607764.0 51 588911.0 52 570058.0 53 571449.0 54 572840.0 55 577750.5 56 582661.0 57 565559.5 58 548458.0 59 506250.0 60 464042.0 61 406628.5 62 349215.0 63 298657.0 64 248099.0 65 209500.5 66 170902.0 67 149230.5 68 127559.0 69 115096.5 70 102634.0 71 78555.0 72 54476.0 73 47967.0 74 41458.0 75 30011.5 76 18565.0 77 17011.5 78 15458.0 79 13243.5 80 11029.0 81 8736.5 82 6444.0 83 5625.0 84 4806.0 85 3781.0 86 2756.0 87 1839.0 88 922.0 89 593.5 90 265.0 91 197.5 92 130.0 93 110.0 94 90.0 95 75.5 96 61.0 97 67.0 98 73.0 99 55.0 100 37.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032162943459863445 2 0.00493965412210687 3 2.3456458121736535E-4 4 2.7595833084395925E-5 5 1.3797916542197962E-5 6 1.6557499850637555E-4 7 0.0 8 0.0 9 0.0 10 9.658541579538574E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.622999940255022E-4 17 0.0 18 1.5177708196417757E-4 19 1.3797916542197962E-5 20 3.0355416392835514E-4 21 2.7595833084395925E-5 22 0.0 23 1.3797916542197962E-5 24 9.382583248694614E-4 25 2.897562473861572E-4 26 4.967249955191266E-4 27 5.933104113145123E-4 28 0.0017247395677747453 29 5.105229120613246E-4 30 0.001379791654219796 31 4.415333293503348E-4 32 9.796520744960553E-4 33 2.759583308439592E-4 34 6.071083278567103E-4 35 3.0355416392835514E-4 36 1.379791654219796E-4 37 0.001393589570761994 38 0.0 39 5.381187451457205E-4 40 1.103833323375837E-4 41 0.0011452270730024307 42 0.004663695791262911 43 0.003946204131068617 44 0.004208364545370378 45 0.001848920816654527 46 0.0020420916482452984 47 0.0013383979045932023 48 0.003849618715273231 49 0.003946204131068617 50 0.0016557499850637554 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 7247471.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.285636488030484 #Duplication Level Percentage of deduplicated Percentage of total 1 65.06616748514922 23.609673010354328 2 16.65652854961249 12.087854802074807 3 7.058991193270353 7.684199652336497 4 3.5653887960558834 5.174896071687217 5 2.0184482605769793 3.6620339926596843 6 1.2454380436027246 2.7114907271119395 7 0.8498527972079369 2.1586214767476157 8 0.5831991639782579 1.6929402291390676 9 0.44438428311657674 1.4512289902345912 >10 2.2564373553394015 14.773541089098313 >50 0.1492533690602753 3.718627071434391 >100 0.08019428845509753 5.843959747989723 >500 0.011710254924080477 2.983802410801638 >1k 0.01281984558239537 9.421068922153296 >5k 0.001109777676799163 2.738263504958046 >10k+ 7.653639150339055E-5 0.2877983012188788 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 10522 0.14518167785700695 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 10204 0.140793940396588 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 9893 0.13650278835196444 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 9869 0.1361716383549517 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 9598 0.13243240297201603 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 9308 0.12843100717477862 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 9298 0.12829302800935666 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 7959 0.10981761775935357 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 7586 0.10467099488911374 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 7517 0.10371893864770207 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 7340 0.10127670741973303 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3797916542197962E-4 2 0.0 0.0 0.0 0.0 1.3797916542197962E-4 3 0.0 0.0 0.0 0.0 1.3797916542197962E-4 4 0.0 0.0 0.0 1.379791654219796E-5 1.5177708196417757E-4 5 0.0 0.0 0.0 1.379791654219796E-5 1.793729150485735E-4 6 0.0 0.0 0.0 1.379791654219796E-5 2.483624977595633E-4 7 1.379791654219796E-5 0.0 0.0 1.379791654219796E-5 2.483624977595633E-4 8 1.379791654219796E-5 0.0 0.0 5.519166616879184E-5 2.6216041430176124E-4 9 1.379791654219796E-5 0.0 0.0 1.2418124887978165E-4 2.7595833084395925E-4 10 1.379791654219796E-5 0.0 0.0 1.793729150485735E-4 2.7595833084395925E-4 11 1.379791654219796E-5 0.0 0.0 1.793729150485735E-4 2.897562473861572E-4 12 1.379791654219796E-5 0.0 0.0 2.0696874813296942E-4 7.864812429052838E-4 13 1.379791654219796E-5 0.0 0.0 2.3456458121736535E-4 0.001007247907580451 14 2.759583308439592E-5 0.0 0.0 2.483624977595633E-4 0.0010210458241226492 15 2.759583308439592E-5 0.0 0.0 3.173520804705531E-4 0.0013521958211354002 16 2.759583308439592E-5 0.0 0.0 3.58745830097147E-4 0.001462579153472984 17 2.759583308439592E-5 0.0 0.0 3.7254374663934494E-4 0.0015039729030995777 18 2.759583308439592E-5 0.0 0.0 4.8292707897692864E-4 0.0016971437346903493 19 1.1038333233758369E-4 0.0 0.0 5.381187451457205E-4 0.0016971437346903493 20 1.1038333233758369E-4 0.0 0.0 6.760979105677001E-4 0.0019593041489921106 21 1.1038333233758369E-4 0.0 0.0 7.17491660194294E-4 0.002124879147498486 22 1.1038333233758369E-4 0.0 0.0 9.382583248694614E-4 0.002152474980582882 23 1.1038333233758369E-4 0.0 0.0 0.0012280145722556185 0.0021938687302094756 24 1.793729150485735E-4 0.0 0.0 0.001752335400859141 0.002207666646751674 25 1.793729150485735E-4 0.0 0.0 0.002138677064040684 0.002207666646751674 26 1.793729150485735E-4 0.0 0.0 0.002566412476848821 0.0023180499790892576 27 1.793729150485735E-4 0.0 0.0 0.0030217437227413537 0.002373241645258049 28 2.0696874813296942E-4 0.0 0.0 0.003573660384429272 0.0024008374783424454 29 2.483624977595633E-4 0.0 0.0 0.004373939543876754 0.0024008374783424454 30 2.7595833084395925E-4 0.0 0.0 0.005532964533421382 0.0024008374783424454 31 2.7595833084395925E-4 0.0 0.0 0.007575056181666681 0.002428433311426841 32 2.7595833084395925E-4 0.0 0.0 0.010113872825431105 0.002511220810680029 33 2.897562473861572E-4 0.0 0.0 0.012749274884990915 0.002525018727222227 34 2.897562473861572E-4 0.0 0.0 0.016212551937082605 0.0026905937257286025 35 3.173520804705531E-4 0.0 0.0 0.019275689409450552 0.0027043916422708003 36 3.4494791355494904E-4 0.0 0.0 0.023111510208181585 0.0027043916422708003 37 3.4494791355494904E-4 0.0 0.0 0.028796251823567143 0.0027181895588129982 38 3.7254374663934494E-4 0.0 0.0 0.03667486216916218 0.002787179141523988 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8445 0.0 28.63797 1 GGTATCA 3125 0.0 24.506056 1 TCAACGC 13210 0.0 18.10227 4 ATCAACG 13450 0.0 17.81197 3 CAACGCA 13700 0.0 17.486933 5 AACGCAG 13725 0.0 17.455082 6 TAGGACG 815 0.0 17.005495 4 TATCAAC 14535 0.0 16.694708 2 CGCAATA 1965 0.0 16.346342 36 ATACCGT 3210 0.0 15.968246 6 GTATTAC 650 0.0 15.912144 1 ACCGTCG 3170 0.0 15.892147 8 TACCGTC 3275 0.0 15.7184925 7 CCGTCGT 3220 0.0 15.577054 9 CGTCGTA 3225 0.0 15.484902 10 TACGAAT 2065 0.0 15.342838 41 GTCCTAT 2280 0.0 15.056844 1 ATACGAA 2175 0.0 14.667531 40 GTCGTAG 3390 0.0 14.666317 11 CAATACG 2205 0.0 14.567752 38 >>END_MODULE