##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061990_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2761735 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.253402299641348 32.0 32.0 32.0 32.0 32.0 2 30.762431225298588 32.0 32.0 32.0 32.0 32.0 3 30.793089851126194 32.0 32.0 32.0 32.0 32.0 4 30.802026262476307 32.0 32.0 32.0 32.0 32.0 5 30.703018573469215 32.0 32.0 32.0 32.0 32.0 6 34.36032856157452 36.0 36.0 36.0 32.0 36.0 7 34.29648065437126 36.0 36.0 36.0 32.0 36.0 8 34.24615214711042 36.0 36.0 36.0 32.0 36.0 9 34.394020787657034 36.0 36.0 36.0 32.0 36.0 10 34.06423027553331 36.0 36.0 36.0 32.0 36.0 11 34.37981341439349 36.0 36.0 36.0 32.0 36.0 12 34.19138295310738 36.0 36.0 36.0 32.0 36.0 13 34.28651735231657 36.0 36.0 36.0 32.0 36.0 14 34.184151267228756 36.0 36.0 36.0 32.0 36.0 15 34.1331800480495 36.0 36.0 36.0 32.0 36.0 16 34.13964229008214 36.0 36.0 36.0 32.0 36.0 17 34.07207968903606 36.0 36.0 36.0 32.0 36.0 18 34.073394080170615 36.0 36.0 36.0 32.0 36.0 19 34.08635911845271 36.0 36.0 36.0 32.0 36.0 20 34.07412695280322 36.0 36.0 36.0 32.0 36.0 21 34.045065873445495 36.0 36.0 36.0 32.0 36.0 22 34.018184945333275 36.0 36.0 36.0 32.0 36.0 23 33.98828707316234 36.0 36.0 36.0 32.0 36.0 24 33.96077176122981 36.0 36.0 36.0 32.0 36.0 25 33.59513494234603 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 39.0 5 226.0 6 554.0 7 145.0 8 501.0 9 386.0 10 195.0 11 53.0 12 123.0 13 99.0 14 294.0 15 491.0 16 808.0 17 1161.0 18 1598.0 19 2323.0 20 3575.0 21 5278.0 22 7909.0 23 11719.0 24 16764.0 25 23471.0 26 32701.0 27 42379.0 28 56281.0 29 75599.0 30 98873.0 31 133811.0 32 189125.0 33 267228.0 34 576807.0 35 1211217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.800894809222996 17.581270417633156 11.980565635878692 25.637269137265157 2 16.70258015902357 19.48938509173058 37.65018218659398 26.157852562651872 3 19.218442729649706 23.061812633227806 28.13094172936619 29.588802907756296 4 13.014237111367418 15.813206491528891 35.31415617548059 35.8584002216231 5 15.18045040339552 36.20240262473314 33.20017212314919 15.41697484872215 6 34.59655916674487 34.68873404829254 16.861698909155205 13.853007875807391 7 30.79969580690553 30.119429862685383 20.13963448981323 18.94123984059586 8 28.15510331025628 33.18412210840572 19.01901201604072 19.64176256529728 9 26.891319889038893 15.129145271754657 18.694633641284724 39.28490119792173 10 16.573196049724338 26.868741583837487 30.900595557934018 25.65746680850416 11 36.600894106504484 21.58089836346383 21.978202482597776 19.840005047433912 12 24.49933830061094 23.831910226428093 28.418411558891243 23.250339914069723 13 29.2353619796142 19.76101028426572 24.96938213918238 26.034245596937705 14 23.462923248027586 19.730089887868544 25.145910094730993 31.661076769372876 15 25.17665605648643 27.14134623716889 22.006981036916393 25.675016669428285 16 25.703351974344862 26.066529052353616 23.4307581765596 24.799360796741922 17 24.14090888821456 26.25797911969468 24.89351203806122 24.70759995402954 18 24.657557585461525 25.53868048700827 25.6326761131123 24.171085814417907 19 25.43715592489671 25.416532712438116 25.078841200176726 24.06747016248844 20 25.616838860984153 24.86016724479548 24.805151078813374 24.71784281540699 21 26.28215629281163 24.576069701867947 24.578534202190504 24.563239803129918 22 25.688908736084816 24.59860173927164 24.86639389660062 24.846095628042928 23 24.456222771276185 24.70018054034544 25.28072175551025 25.56287493286813 24 24.49800230213658 25.318428400363008 25.184729064039406 24.998840233461003 25 24.74553088964706 24.859111490921162 25.107292715402675 25.2880649040291 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 307.0 1 307.0 2 528.5 3 750.0 4 750.0 5 750.0 6 1616.5 7 2483.0 8 2483.0 9 2483.0 10 3122.5 11 3762.0 12 3762.0 13 3762.0 14 5626.5 15 7491.0 16 7491.0 17 7491.0 18 12671.5 19 17852.0 20 17852.0 21 17852.0 22 28038.0 23 38224.0 24 38224.0 25 38224.0 26 56775.0 27 75326.0 28 75326.0 29 75326.0 30 95276.5 31 115227.0 32 115227.0 33 115227.0 34 143108.5 35 170990.0 36 170990.0 37 170990.0 38 199781.5 39 228573.0 40 228573.0 41 228573.0 42 260532.5 43 292492.0 44 292492.0 45 292492.0 46 323718.0 47 354944.0 48 354944.0 49 354944.0 50 367014.0 51 379084.0 52 379084.0 53 379084.0 54 357224.5 55 335365.0 56 335365.0 57 335365.0 58 307544.5 59 279724.0 60 279724.0 61 279724.0 62 242872.0 63 206020.0 64 206020.0 65 206020.0 66 166413.0 67 126806.0 68 126806.0 69 126806.0 70 95484.5 71 64163.0 72 64163.0 73 64163.0 74 47872.0 75 31581.0 76 31581.0 77 31581.0 78 24808.5 79 18036.0 80 18036.0 81 18036.0 82 12494.0 83 6952.0 84 6952.0 85 6952.0 86 5071.5 87 3191.0 88 3191.0 89 3191.0 90 2145.5 91 1100.0 92 1100.0 93 1100.0 94 697.5 95 295.0 96 295.0 97 295.0 98 646.0 99 997.0 100 997.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010500645427602576 2 2.1725473298488088E-4 3 6.517641989546427E-4 4 0.010500645427602576 5 0.03334860151317922 6 0.06387289149755498 7 0.1072152107280387 8 0.10884462122542533 9 0.11916422104220716 10 0.13212708677697171 11 0.14114315819584428 12 0.133430615174881 13 0.12821650158324388 14 0.11539847233713589 15 0.13368407903003005 16 0.11952631226384863 17 0.12463179848899333 18 0.11210344222019854 19 0.09805430282050957 20 0.09218842502991778 21 0.09251430712939511 22 0.10424606271057868 23 0.081144642769853 24 0.09265914361805169 25 0.08911064964596531 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2761735.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.70070000598154 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25056964118028 36.63154456638758 2 15.506181254675896 15.72348488063394 3 5.4541776528557016 8.295918748702961 4 2.3848733224984304 4.836589875050455 5 1.2532111924104454 3.1769342355270203 6 0.7228400345595796 2.198909744671114 7 0.4960745893366465 1.7605930254183457 8 0.3346415931861825 1.357325042052508 9 0.2339149522261964 1.0673686637760498 >10 1.2045430691731065 10.95238823473578 >50 0.0878893647391608 3.0954222907577646 >100 0.061203542572541805 6.292405195607756 >500 0.006872897798857287 2.3698596423345033 >1k 0.0030068927869648923 2.241255854344151 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3477 0.12589911776473847 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4483648865658725E-4 2 0.0 0.0 0.0 0.0 1.4483648865658725E-4 3 0.0 0.0 0.0 0.0 1.4483648865658725E-4 4 0.0 0.0 0.0 0.0 1.4483648865658725E-4 5 3.620912216414681E-5 0.0 0.0 0.0 1.4483648865658725E-4 6 3.620912216414681E-5 0.0 0.0 0.0 2.1725473298488088E-4 7 7.241824432829362E-5 0.0 0.0 3.620912216414681E-5 2.1725473298488088E-4 8 7.241824432829362E-5 0.0 0.0 3.620912216414681E-5 2.1725473298488088E-4 9 7.241824432829362E-5 0.0 0.0 3.620912216414681E-5 2.1725473298488088E-4 10 7.241824432829362E-5 0.0 0.0 3.620912216414681E-5 2.1725473298488088E-4 11 1.0862736649244044E-4 0.0 0.0 3.620912216414681E-5 2.1725473298488088E-4 12 1.0862736649244044E-4 0.0 0.0 3.620912216414681E-5 2.534638551490277E-4 13 1.0862736649244044E-4 0.0 0.0 3.620912216414681E-5 4.3450946596976177E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1155 0.0 13.237182 1 AACCGCG 210 0.0 13.120274 7 CGTCGTA 380 0.0 12.251813 10 GTATCAA 2820 0.0 12.190207 1 CGTTATT 185 0.0 11.809346 2 CCGTCGT 395 0.0 11.545803 9 GCGTTAT 200 0.0 11.395487 1 ACCGTCG 395 0.0 11.305265 8 CGCGGTC 230 0.0 11.153825 10 GACCCGT 60 0.0058735237 11.084371 6 CGACCAT 420 0.0 10.858749 10 TACCGTC 445 0.0 10.675156 7 ATACCGT 455 0.0 10.649348 6 CGGTCCA 340 0.0 10.619219 10 CGCCGGT 360 0.0 10.556543 7 AGAACCG 295 0.0 10.305861 5 ACGAACG 130 3.8472717E-7 10.230242 15 TCTTGCG 370 0.0 10.012272 2 ACTCTAA 295 0.0 9.984528 10 TAGAACC 325 0.0 9.93867 4 >>END_MODULE