##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061988_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3613079 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.222558100722402 32.0 32.0 32.0 32.0 32.0 2 30.72053475719739 32.0 32.0 32.0 32.0 32.0 3 30.74700746925268 32.0 32.0 32.0 32.0 32.0 4 30.75450910428474 32.0 32.0 32.0 32.0 32.0 5 30.66506793790006 32.0 32.0 32.0 32.0 32.0 6 34.329215884845034 36.0 36.0 36.0 32.0 36.0 7 34.26290512883887 36.0 36.0 36.0 32.0 36.0 8 34.2177098812398 36.0 36.0 36.0 32.0 36.0 9 34.35015564287413 36.0 36.0 36.0 32.0 36.0 10 34.02081604083387 36.0 36.0 36.0 32.0 36.0 11 34.34764670243856 36.0 36.0 36.0 32.0 36.0 12 34.161401397533794 36.0 36.0 36.0 32.0 36.0 13 34.24251171922894 36.0 36.0 36.0 32.0 36.0 14 34.14339791629245 36.0 36.0 36.0 32.0 36.0 15 34.09607678105018 36.0 36.0 36.0 32.0 36.0 16 34.1025889552927 36.0 36.0 36.0 32.0 36.0 17 34.044270828288006 36.0 36.0 36.0 32.0 36.0 18 34.04556667595699 36.0 36.0 36.0 32.0 36.0 19 34.042687691024746 36.0 36.0 36.0 32.0 36.0 20 34.026846908135695 36.0 36.0 36.0 32.0 36.0 21 34.01548872858855 36.0 36.0 36.0 32.0 36.0 22 33.981666883010305 36.0 36.0 36.0 32.0 36.0 23 33.94979877273649 36.0 36.0 36.0 32.0 36.0 24 33.920781416625545 36.0 36.0 36.0 32.0 36.0 25 33.561036999190996 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 50.0 5 270.0 6 742.0 7 162.0 8 654.0 9 489.0 10 276.0 11 75.0 12 139.0 13 156.0 14 481.0 15 745.0 16 1258.0 17 1755.0 18 2611.0 19 3446.0 20 5166.0 21 7475.0 22 11283.0 23 16649.0 24 23519.0 25 32491.0 26 44887.0 27 57146.0 28 75572.0 29 99513.0 30 129985.0 31 174676.0 32 245881.0 33 345534.0 34 744363.0 35 1585625.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.038031664176614 17.199910767713188 11.855799074574833 25.90625849353537 2 16.35282913224187 19.884203706046026 37.719124655521384 26.043842506190725 3 19.02582636507861 24.061153838915132 28.153732633795475 28.759287162210782 4 13.232027866108046 16.099049354721558 35.35227353251194 35.31664924665846 5 14.96766509241986 36.3087317816786 33.55255398426196 15.171049141639575 6 33.78038182183752 34.75897544972103 17.457074538176368 14.003568190265078 7 29.954945781718813 30.163717403850764 21.061191558145598 18.820145256284828 8 27.716677985205823 33.285177590234525 19.572621936132407 19.425522488427244 9 27.186121658832423 15.180433232623876 18.59817204441118 39.03527306413251 10 16.071689383695563 27.237376300255555 31.752162346500352 24.93877196954853 11 35.8023042077512 21.578776987190714 23.108845656661515 19.510073148396568 12 24.819884885961272 23.36474654735484 29.169447332888428 22.64592123379546 13 29.368844326942796 20.365751594863184 25.13945007011301 25.12595400808101 14 23.403786615695942 19.52631142887148 25.64659454250071 31.423307412931862 15 24.76953720093463 27.478554204312687 22.399905994069755 25.352002600682926 16 25.230188340449306 26.07756518539209 23.957127941156912 24.7351185330017 17 23.934256323852175 26.16755714190702 25.447436096393023 24.450750437847784 18 24.148801196545246 25.897845337438564 26.024360380010624 23.92899308600557 19 25.30169047508891 25.284264610506995 25.44475432993949 23.969290584464606 20 25.59529053258536 25.022369970219543 25.272830528429946 24.10950896876515 21 25.48145833437218 24.775345299773228 25.05683200166659 24.686364364187998 22 25.42355553646951 24.86551032932203 25.004896956129645 24.706037178078812 23 24.632120345204683 25.032657940893284 25.29259188265966 25.042629831242376 24 24.669122576455845 25.0769849598149 25.470497501797883 24.783394961931364 25 24.827738469405677 25.028158534348982 25.36329080051126 24.780812195734086 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 497.0 1 497.0 2 904.0 3 1311.0 4 1311.0 5 1311.0 6 2825.0 7 4339.0 8 4339.0 9 4339.0 10 4877.5 11 5416.0 12 5416.0 13 5416.0 14 7610.5 15 9805.0 16 9805.0 17 9805.0 18 16650.0 19 23495.0 20 23495.0 21 23495.0 22 36762.5 23 50030.0 24 50030.0 25 50030.0 26 74338.5 27 98647.0 28 98647.0 29 98647.0 30 129061.0 31 159475.0 32 159475.0 33 159475.0 34 195980.0 35 232485.0 36 232485.0 37 232485.0 38 273360.0 39 314235.0 40 314235.0 41 314235.0 42 357001.0 43 399767.0 44 399767.0 45 399767.0 46 434651.0 47 469535.0 48 469535.0 49 469535.0 50 483094.5 51 496654.0 52 496654.0 53 496654.0 54 471120.5 55 445587.0 56 445587.0 57 445587.0 58 400998.0 59 356409.0 60 356409.0 61 356409.0 62 303920.5 63 251432.0 64 251432.0 65 251432.0 66 202837.0 67 154242.0 68 154242.0 69 154242.0 70 115719.5 71 77197.0 72 77197.0 73 77197.0 74 56024.5 75 34852.0 76 34852.0 77 34852.0 78 25631.0 79 16410.0 80 16410.0 81 16410.0 82 11231.0 83 6052.0 84 6052.0 85 6052.0 86 4319.0 87 2586.0 88 2586.0 89 2586.0 90 1715.0 91 844.0 92 844.0 93 844.0 94 594.0 95 344.0 96 344.0 97 344.0 98 888.5 99 1433.0 100 1433.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00102405732063982 2 2.7677224882157294E-4 3 7.47285071818247E-4 4 0.010378959330808986 5 0.033018929284413655 6 0.06324245885572942 7 0.10716621474371306 8 0.10949110163381427 9 0.12034057378761992 10 0.13412383177893425 11 0.14035120737741963 12 0.1337086734057019 13 0.12784110173068455 14 0.11652111675388221 15 0.1327399705348264 16 0.11887368086886559 17 0.1250733792424688 18 0.11131779847603665 19 0.09692564153731485 20 0.09213748163270163 21 0.09180535493411575 22 0.10223966871468905 23 0.08112194612960304 24 0.09086432928812241 25 0.08748770785249921 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3613079.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.25669464610055 #Duplication Level Percentage of deduplicated Percentage of total 1 68.39789512318217 33.00656339395412 2 15.931094723185426 15.375639468697258 3 6.23978481579735 9.033341715399224 4 3.0546977257702763 5.896384615545362 5 1.7423239313289867 4.2039396964368185 6 1.0516648892701772 3.044992285892165 7 0.7129698617208613 2.4083898236255297 8 0.4910958635227852 1.8958930502385691 9 0.3651612029640617 1.5859325401235524 >10 1.8713011915438615 15.887748214514383 >50 0.0992367764854211 3.2767860549795365 >100 0.04104137170206174 3.3980629599671888 >500 0.0010972649050333067 0.3499741256844262 >1k 5.775078377250794E-4 0.4616436800434313 >5k 5.775078377250789E-5 0.17470837489841648 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6269 0.1735085227862441 No Hit TATCAACGCAGAGTACTTTTTTTTT 3745 0.10365120718367907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.8748114835020214E-4 2 0.0 0.0 0.0 0.0 3.8748114835020214E-4 3 0.0 0.0 0.0 0.0 3.8748114835020214E-4 4 0.0 0.0 0.0 0.0 3.8748114835020214E-4 5 0.0 0.0 0.0 0.0 4.428355981145167E-4 6 0.0 0.0 0.0 0.0 4.981900478788314E-4 7 0.0 0.0 0.0 0.0 4.981900478788314E-4 8 0.0 0.0 0.0 0.0 4.981900478788314E-4 9 0.0 0.0 0.0 0.0 4.981900478788314E-4 10 0.0 0.0 0.0 0.0 5.812217225253032E-4 11 0.0 0.0 0.0 2.7677224882157295E-5 5.812217225253032E-4 12 0.0 0.0 0.0 2.7677224882157295E-5 9.410256459933481E-4 13 0.0 0.0 0.0 2.7677224882157295E-5 9.963800957576627E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3765 0.0 13.315696 1 GGTATCA 1255 0.0 11.272947 1 GACTTAT 120 1.2863711E-7 11.077498 1 CGTCGTA 195 1.8189894E-12 10.719286 10 CCGTCGT 160 5.4387783E-10 10.688833 9 CGTTATT 80 3.7829563E-4 10.684538 2 GCGTTAT 90 9.573126E-5 10.549998 1 CGCCGGT 115 1.0261603E-5 9.914006 7 CGTCTTA 115 1.0264985E-5 9.913731 15 CTTAGAC 250 0.0 9.87822 3 CGCGTAA 80 0.004513245 9.501184 10 ACCGTCG 200 2.6557245E-10 9.500922 8 ATAATAC 295 0.0 9.3373 3 GTGCTAG 295 0.0 9.334065 1 ATTATAC 275 0.0 9.325592 3 ATACCGT 205 4.2382453E-10 9.269193 6 TTACCGC 175 2.6708221E-8 9.229083 16 TAGGACG 670 0.0 9.216418 4 TATCAAC 5415 0.0 9.2079735 2 TAATACT 465 0.0 9.193548 4 >>END_MODULE