##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061987_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1505164 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.286154199808127 32.0 32.0 32.0 32.0 32.0 2 31.462699081296126 32.0 32.0 32.0 32.0 32.0 3 31.584126380912643 32.0 32.0 32.0 32.0 32.0 4 31.658920223975592 32.0 32.0 32.0 32.0 32.0 5 31.639685110725477 32.0 32.0 32.0 32.0 32.0 6 35.282488154114766 36.0 36.0 36.0 36.0 36.0 7 35.28698334533645 36.0 36.0 36.0 36.0 36.0 8 35.24136838244869 36.0 36.0 36.0 36.0 36.0 9 35.317400628768695 36.0 36.0 36.0 36.0 36.0 10 35.208102904401116 36.0 36.0 36.0 36.0 36.0 11 35.32903324820418 36.0 36.0 36.0 36.0 36.0 12 35.25411184429072 36.0 36.0 36.0 36.0 36.0 13 35.28019338756441 36.0 36.0 36.0 36.0 36.0 14 35.24156570313932 36.0 36.0 36.0 36.0 36.0 15 35.22679189775998 36.0 36.0 36.0 36.0 36.0 16 35.23535508423002 36.0 36.0 36.0 36.0 36.0 17 35.218432011395436 36.0 36.0 36.0 36.0 36.0 18 35.21444839233465 36.0 36.0 36.0 36.0 36.0 19 35.20871546223535 36.0 36.0 36.0 36.0 36.0 20 35.20718672516749 36.0 36.0 36.0 36.0 36.0 21 35.19592416507437 36.0 36.0 36.0 36.0 36.0 22 35.17502876762931 36.0 36.0 36.0 36.0 36.0 23 35.14939966674728 36.0 36.0 36.0 36.0 36.0 24 35.13419600787688 36.0 36.0 36.0 36.0 36.0 25 35.11336173333936 36.0 36.0 36.0 36.0 36.0 26 35.07655179103406 36.0 36.0 36.0 36.0 36.0 27 35.06261909001278 36.0 36.0 36.0 36.0 36.0 28 35.039689362753826 36.0 36.0 36.0 36.0 36.0 29 35.02064426202062 36.0 36.0 36.0 36.0 36.0 30 35.00347869069417 36.0 36.0 36.0 36.0 36.0 31 34.99633196116835 36.0 36.0 36.0 36.0 36.0 32 34.971672854253754 36.0 36.0 36.0 36.0 36.0 33 34.94384665059754 36.0 36.0 36.0 36.0 36.0 34 34.94273979446758 36.0 36.0 36.0 36.0 36.0 35 34.916797106494705 36.0 36.0 36.0 36.0 36.0 36 34.89989396504301 36.0 36.0 36.0 32.0 36.0 37 34.87934271614256 36.0 36.0 36.0 32.0 36.0 38 34.87434326093369 36.0 36.0 36.0 32.0 36.0 39 34.85528487261189 36.0 36.0 36.0 32.0 36.0 40 34.84609650509845 36.0 36.0 36.0 32.0 36.0 41 34.811096996739224 36.0 36.0 36.0 32.0 36.0 42 34.78232205925733 36.0 36.0 36.0 32.0 36.0 43 34.778558349787794 36.0 36.0 36.0 32.0 36.0 44 34.741437477909386 36.0 36.0 36.0 32.0 36.0 45 34.714987204052186 36.0 36.0 36.0 32.0 36.0 46 34.696003890605944 36.0 36.0 36.0 32.0 36.0 47 34.66989909405221 36.0 36.0 36.0 32.0 36.0 48 34.64611696798488 36.0 36.0 36.0 32.0 36.0 49 34.627707013986516 36.0 36.0 36.0 32.0 36.0 50 34.22673608988788 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 8.0 20 19.0 21 33.0 22 107.0 23 284.0 24 692.0 25 1631.0 26 3628.0 27 6826.0 28 11564.0 29 18451.0 30 27559.0 31 40598.0 32 61459.0 33 103433.0 34 237771.0 35 991100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.91566144950653 18.180972319143986 12.263449971754229 25.639916259595253 2 15.841762429705856 20.08439283929881 37.69759431906367 26.376250411931668 3 18.715560002498083 23.67192991547709 28.631023802215587 28.981486279809243 4 12.494585307647538 16.062236407461246 35.696973884573374 35.746204400317836 5 14.398431001538704 36.92840115761472 33.2779019429112 15.395265897935376 6 33.94518330917203 35.898926494290976 16.642527515310647 13.51336268122634 7 30.291383530299687 30.52982930763691 20.065255347590032 19.113531814473372 8 28.424676646531537 33.22993374808327 18.934481558155788 19.410908047229405 9 27.213180756382695 14.236521734508663 18.61717394250726 39.93312356660138 10 15.963387354060657 27.046970992510445 31.346505328658758 25.643136324770143 11 37.1358868535256 21.646544828337642 21.641229792899644 19.576338525237116 12 24.283748670409782 24.066297138582332 28.89461141417906 22.755342776828822 13 29.36404272225485 20.052765014310733 25.157192173078812 25.426000090355604 14 23.304570133221365 19.863549752717976 25.274920208030487 31.556959906030173 15 25.485063421660364 27.047883154260933 22.095133819304742 25.371919604773964 16 25.621816340862384 26.424130001920076 23.56414356870126 24.38991008851627 17 23.634434520092164 26.205051409680273 25.263027816237965 24.897486253989598 18 24.259812910255388 25.961426027797707 25.761314411756892 24.017446650190013 19 25.899702623767247 25.121315683872318 25.158454493995343 23.820527198365095 20 25.6206819345996 24.999750856886216 25.278857582487962 24.10070962602622 21 26.23415122870332 24.256758731938845 25.084774815236084 24.424315224121756 22 25.51642213074456 24.94711539739191 25.202170660472877 24.334291811390653 23 24.60643797382742 24.66377395670768 25.462159247868836 25.267628821596066 24 24.858850902171618 25.52297252226694 24.99910307704369 24.61907349851775 25 24.8212814584496 24.84865396369821 25.21419649738234 25.11586808046985 26 24.565942290405584 25.456015551866017 25.720174041644828 24.25786811608357 27 24.93435896345628 25.28727919232292 25.199182011698458 24.579179832522343 28 24.57122014320234 25.136681365159326 25.486083382110536 24.8060151095278 29 24.751504328119925 25.20793511906067 25.419208760282153 24.621351792537258 30 24.69547723736365 25.34259226039802 25.638178989092058 24.32375151314627 31 24.9869282912968 25.13854018080482 24.834585581988346 25.039945945910034 32 24.7349433611268 24.92050626183437 24.926352855197155 25.41819752184168 33 24.656498540687675 24.619293218466332 25.519529140072063 25.204679100773937 34 25.0121084518655 25.126582320530815 25.64380754836571 24.217501679237973 35 25.044646416327833 24.782946663477638 25.558279518456512 24.61412740173802 36 24.342578634445086 25.17511415722305 25.28460410547443 25.19770310285743 37 25.37134542748657 24.85617569188146 24.755453829722914 25.01702505090905 38 24.706211416164617 25.095139134340176 25.339962954203 24.858686495292208 39 25.41087239752025 24.61261361816854 25.21388219520832 24.762631789102887 40 25.36856497838771 24.965419004731718 25.30498378247657 24.361032234404004 41 24.67134439360408 25.37240548597579 25.497509545579266 24.458740574840864 42 25.430548763634043 25.29985595220377 25.068967533433973 24.200627750728213 43 24.92497121432686 24.749234098448664 25.31398475438994 25.011809932834538 44 24.78187495847452 25.154009700352137 25.079529599362164 24.984585741811173 45 24.98840628625112 25.142546205433963 25.00621210450155 24.862835403813367 46 24.835594722554053 25.142878783248136 24.845760011480795 25.175766482717016 47 24.84247438132494 25.23107300790884 25.22801683816651 24.698435772599712 48 25.361706425139264 25.516780414168473 24.62148392652124 24.500029234171024 49 25.04310330508503 25.491909202348005 24.865972805883974 24.599014686682988 50 24.97604877147804 25.689536269667578 24.84529698858978 24.489117970264598 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 186.0 1 113.0 2 40.0 3 122.5 4 205.0 5 213.5 6 222.0 7 195.0 8 168.0 9 223.0 10 278.0 11 489.5 12 701.0 13 1292.5 14 1884.0 15 2523.5 16 3163.0 17 3037.5 18 2912.0 19 2923.0 20 2934.0 21 3449.5 22 3965.0 23 4985.5 24 6006.0 25 7770.0 26 9534.0 27 12391.0 28 15248.0 29 17762.0 30 20276.0 31 23144.5 32 26013.0 33 30057.0 34 34101.0 35 39313.0 36 44525.0 37 50422.0 38 56319.0 39 62403.0 40 68487.0 41 75628.0 42 82769.0 43 84908.5 44 87048.0 45 93575.0 46 100102.0 47 104452.0 48 108802.0 49 112646.0 50 116490.0 51 114730.0 52 112970.0 53 111245.0 54 109520.0 55 106955.5 56 104391.0 57 101321.5 58 98252.0 59 89554.5 60 80857.0 61 71024.5 62 61192.0 63 53175.0 64 45158.0 65 38096.5 66 31035.0 67 26665.0 68 22295.0 69 19861.0 70 17427.0 71 14019.5 72 10612.0 73 9103.5 74 7595.0 75 5917.0 76 4239.0 77 3639.0 78 3039.0 79 2636.0 80 2233.0 81 1571.5 82 910.0 83 713.0 84 516.0 85 417.0 86 318.0 87 216.5 88 115.0 89 73.5 90 32.0 91 29.5 92 27.0 93 20.0 94 13.0 95 13.0 96 13.0 97 18.0 98 23.0 99 13.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03414910268914218 2 0.003986276578499088 3 6.643794297498479E-4 4 0.0 5 0.0 6 1.3287588594996957E-4 7 0.0 8 0.0 9 0.0 10 6.643794297498479E-5 11 0.0 12 6.643794297498479E-5 13 0.0 14 0.0 15 0.0 16 0.0011294450305747413 17 0.0 18 2.6575177189993915E-4 19 0.0 20 3.3218971487492395E-4 21 0.0 22 0.0 23 6.643794297498479E-5 24 0.0011958829735497262 25 2.6575177189993915E-4 26 4.6506560082489355E-4 27 5.315035437998783E-4 28 0.0013951968024746805 29 4.6506560082489355E-4 30 0.0014616347454496652 31 3.3218971487492395E-4 32 9.301312016497871E-4 33 1.9931382892495435E-4 34 0.0011294450305747413 35 2.6575177189993915E-4 36 1.9931382892495435E-4 37 0.0019267003462745587 38 0.0 39 8.636932586748023E-4 40 1.3287588594996957E-4 41 0.0011294450305747413 42 0.007175297841298356 43 0.004982845723123859 44 0.004252028350399026 45 0.0025246418330494218 46 0.002790393604949361 47 7.972553156998174E-4 48 0.0050492836660988435 49 0.003919838635524102 50 0.0014616347454496652 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1505164.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.08746187662946 #Duplication Level Percentage of deduplicated Percentage of total 1 72.15303901150521 37.58268668794736 2 15.744408985357278 16.401726055897193 3 5.5559137301103 8.681803338208873 4 2.3297390274115797 4.8540077109118585 5 1.1892425805733993 3.0972313788840693 6 0.698480701613649 2.1829252150117404 7 0.44204464243467495 1.6117488422409103 8 0.3150778051070483 1.3129282529348374 9 0.2215877309904253 1.0387748241263342 >10 1.1811066066624505 11.169843976566671 >50 0.0976353074991341 3.5373457816098166 >100 0.06697656822438768 6.792239063283326 >500 0.004490691564091936 1.5942550429273532 >1k 2.5661094651953923E-4 0.14248382944963814 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.643794297498479E-5 2 0.0 0.0 0.0 0.0 6.643794297498479E-5 3 0.0 0.0 0.0 0.0 6.643794297498479E-5 4 0.0 0.0 0.0 6.643794297498479E-5 6.643794297498479E-5 5 0.0 0.0 0.0 6.643794297498479E-5 6.643794297498479E-5 6 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 7 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 8 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 9 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 10 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 11 0.0 0.0 0.0 6.643794297498479E-5 1.3287588594996957E-4 12 0.0 0.0 0.0 6.643794297498479E-5 5.979414867748631E-4 13 0.0 0.0 0.0 1.3287588594996957E-4 7.972553156998174E-4 14 0.0 0.0 0.0 1.3287588594996957E-4 7.972553156998174E-4 15 0.0 0.0 0.0 1.9931382892495435E-4 9.30131201649787E-4 16 0.0 0.0 0.0 1.9931382892495435E-4 9.30131201649787E-4 17 0.0 0.0 0.0 1.9931382892495435E-4 9.30131201649787E-4 18 0.0 0.0 0.0 1.9931382892495435E-4 9.965691446247717E-4 19 0.0 0.0 0.0 3.986276578499087E-4 9.965691446247717E-4 20 0.0 0.0 0.0 5.315035437998783E-4 0.0010630070875997566 21 0.0 0.0 0.0 7.308173727248327E-4 0.0010630070875997566 22 0.0 0.0 0.0 9.30131201649787E-4 0.0011294450305747413 23 0.0 0.0 0.0 0.00152807268842465 0.0011294450305747413 24 0.0 0.0 0.0 0.002192452118174498 0.0011294450305747413 25 0.0 0.0 0.0 0.0029232694908993308 0.0011294450305747413 26 0.0 0.0 0.0 0.0032554592057742545 0.0013951968024746805 27 0.0 0.0 0.0 0.0038534006925491178 0.0014616347454496654 28 0.0 0.0 0.0 0.0045842180652739505 0.0014616347454496654 29 0.0 0.0 0.0 0.0058465389817986615 0.0014616347454496654 30 0.0 0.0 0.0 0.007108859898323372 0.0014616347454496654 31 0.0 0.0 0.0 0.009832815560297749 0.0014616347454496654 32 0.0 0.0 0.0 0.013819092138796835 0.0014616347454496654 33 0.0 0.0 0.0 0.01694167545862112 0.0014616347454496654 34 0.0 0.0 0.0 0.02152589352389507 0.0014616347454496654 35 0.0 0.0 0.0 0.025512170102394156 0.0014616347454496654 36 0.0 0.0 0.0 0.03301965765856744 0.0014616347454496654 37 0.0 0.0 0.0 0.042254531732090324 0.0014616347454496654 38 0.0 0.0 0.0 0.055209930612212355 0.0014616347454496654 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 915 0.0 28.85989 1 GTATCAA 2435 0.0 27.29245 1 CTAGCGG 250 0.0 19.359196 29 TCAACGC 3420 0.0 19.23312 4 ATCAACG 3490 0.0 18.847355 3 AACGCAG 3590 0.0 18.383638 6 TATCAAC 3850 0.0 17.543295 2 CAACGCA 3765 0.0 17.470724 5 TACGAAT 265 0.0 17.436134 41 GTATTAA 330 0.0 17.337797 1 CGCAATA 270 0.0 17.112106 36 GATATAC 285 0.0 16.98683 1 TAGGACG 235 0.0 16.850365 4 TTAGGAC 290 0.0 16.688961 3 ATACGAA 265 0.0 16.605843 40 TAGCGGC 305 0.0 16.589476 30 TAGGACA 320 0.0 16.499315 4 GCGCTAT 120 6.4111628E-6 16.499315 11 TCTAGCG 280 0.0 16.499313 28 TACTAGA 135 1.0855947E-6 16.296703 2 >>END_MODULE