##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061985_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1696128 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.131748901026338 32.0 32.0 32.0 32.0 32.0 2 31.0661058599351 32.0 32.0 32.0 32.0 32.0 3 31.351468167496794 32.0 32.0 32.0 32.0 32.0 4 31.498965290355446 32.0 32.0 32.0 32.0 32.0 5 31.413768890083766 32.0 32.0 32.0 32.0 32.0 6 35.04171442249641 36.0 36.0 36.0 36.0 36.0 7 35.05929976982869 36.0 36.0 36.0 36.0 36.0 8 34.9875581324051 36.0 36.0 36.0 36.0 36.0 9 35.13282134367218 36.0 36.0 36.0 36.0 36.0 10 34.94243358991774 36.0 36.0 36.0 32.0 36.0 11 35.134589488529166 36.0 36.0 36.0 36.0 36.0 12 35.03919692381707 36.0 36.0 36.0 36.0 36.0 13 35.08337637253792 36.0 36.0 36.0 36.0 36.0 14 35.03708859237039 36.0 36.0 36.0 36.0 36.0 15 34.99087981567429 36.0 36.0 36.0 36.0 36.0 16 35.02362321711569 36.0 36.0 36.0 36.0 36.0 17 34.9991309618142 36.0 36.0 36.0 36.0 36.0 18 34.997339823409554 36.0 36.0 36.0 36.0 36.0 19 34.99229185533167 36.0 36.0 36.0 36.0 36.0 20 34.98930858991774 36.0 36.0 36.0 36.0 36.0 21 34.97160709569089 36.0 36.0 36.0 36.0 36.0 22 34.95643783959701 36.0 36.0 36.0 32.0 36.0 23 34.917455522224735 36.0 36.0 36.0 32.0 36.0 24 34.906144465512035 36.0 36.0 36.0 32.0 36.0 25 34.88362729699645 36.0 36.0 36.0 32.0 36.0 26 34.83582430099615 36.0 36.0 36.0 32.0 36.0 27 34.81336726945136 36.0 36.0 36.0 32.0 36.0 28 34.788761815146025 36.0 36.0 36.0 32.0 36.0 29 34.76788367387367 36.0 36.0 36.0 32.0 36.0 30 34.75005483076749 36.0 36.0 36.0 32.0 36.0 31 34.73670855029809 36.0 36.0 36.0 32.0 36.0 32 34.710646248396344 36.0 36.0 36.0 32.0 36.0 33 34.681528752546974 36.0 36.0 36.0 32.0 36.0 34 34.66348412383971 36.0 36.0 36.0 32.0 36.0 35 34.65762017960908 36.0 36.0 36.0 32.0 36.0 36 34.62095372519055 36.0 36.0 36.0 32.0 36.0 37 34.61230225549015 36.0 36.0 36.0 32.0 36.0 38 34.59514317315674 36.0 36.0 36.0 32.0 36.0 39 34.56831618840088 36.0 36.0 36.0 32.0 36.0 40 34.56697666685533 36.0 36.0 36.0 32.0 36.0 41 34.533241005395816 36.0 36.0 36.0 32.0 36.0 42 34.51148851973436 36.0 36.0 36.0 32.0 36.0 43 34.49069822560561 36.0 36.0 36.0 32.0 36.0 44 34.44726577239454 36.0 36.0 36.0 32.0 36.0 45 34.42905193475964 36.0 36.0 36.0 32.0 36.0 46 34.408435566183684 36.0 36.0 36.0 32.0 36.0 47 34.38415614859256 36.0 36.0 36.0 32.0 36.0 48 34.35604801052751 36.0 36.0 36.0 32.0 36.0 49 34.338600624481174 36.0 36.0 36.0 32.0 36.0 50 33.831161327446985 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 40.0 22 103.0 23 289.0 24 775.0 25 1765.0 26 3962.0 27 8059.0 28 14405.0 29 24548.0 30 38411.0 31 59721.0 32 94575.0 33 167313.0 34 368113.0 35 914037.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38792309819966 17.364711488502415 12.589694488790807 26.657670924507126 2 16.388571159039184 19.8426352841291 36.680777802672075 27.08801575415964 3 18.94236506293172 22.4823185097316 28.46761203779912 30.10770438953756 4 13.386312825447137 16.23220653158252 34.67786629310996 35.70361434986039 5 15.404085069051392 35.69376839483812 32.930769375896155 15.971377160214322 6 35.4306261986896 34.314433564075244 16.30972517912911 13.945215058106045 7 31.248820843709908 29.787551411214245 19.711307165496944 19.2523205795789 8 28.16473756697608 33.58590861067089 18.593584918119387 19.655768904233643 9 27.26085531280658 14.880893423137875 17.96556627801675 39.89268498603879 10 16.413462207406763 27.140141711170042 31.28600115793284 25.160394923490355 11 36.74227416798732 21.212255207154175 21.8143324088748 20.231138215983698 12 24.708276733831408 23.124905667496794 28.68722171911554 23.479595879556257 13 29.966311504792092 19.67982369255151 24.386838729152515 25.967026073503884 14 23.572631310844464 19.126445645611653 25.03419553241265 32.266727511131236 15 25.373910459587957 26.80575994264584 21.785325164138555 26.035004433627652 16 25.70872174502113 25.862425764260365 23.423502034352584 25.00535045636592 17 24.560056788166932 25.725652780922193 24.94033469172138 24.773955739189496 18 24.746038914561773 25.670380620307686 25.383196767221307 24.200383697909235 19 25.949869349483055 24.807090030941062 24.918933005056225 24.324107614519658 20 25.727040861447463 24.83282452559427 24.936649604214793 24.503485008743475 21 26.13937517650506 24.262393087310087 24.648625957843958 24.949605778340892 22 25.60667591125198 24.461833069202324 24.960439306467435 24.971051713078257 23 25.33275790506377 24.593898573692552 24.73162402837522 25.341719492868464 24 24.918386923512763 24.890499630626024 24.924400673775864 25.26671277208535 25 25.416066278173062 24.448978966160492 24.980308043515688 25.154646712150765 26 25.147424536678376 24.95634158391908 25.01400253047835 24.882231348924194 27 25.251072741229702 24.857233147143898 24.906639970473822 24.98505414115258 28 25.226798513538927 24.857246792511567 24.956827656713102 24.959127037236403 29 25.16144209221169 24.99671308440033 24.632292899260015 25.209551924127965 30 25.34524527552115 24.96897317572591 24.729838165263754 24.955943383489192 31 25.368444077331837 24.71896134646213 24.655050736416488 25.25754383978954 32 25.2918879815201 24.925461923822294 24.730191915279228 25.052458179378377 33 25.32830697719391 24.706065469192737 24.759717143655603 25.20591040995775 34 25.22638527032102 24.89226838070341 24.877410880053393 25.00393546892218 35 25.195578386708984 24.858751399515246 25.042405533089283 24.903264680686483 36 25.36313698947541 25.020591077415965 24.750917238903074 24.86535469420555 37 25.44285550042893 24.637888797502498 24.79542714293716 25.123828559131418 38 25.365774281186326 24.86592992981662 24.792409535129426 24.975886253867632 39 25.736492792638227 24.70867212267107 24.5442962821463 25.010538802544406 40 25.677234873608963 24.757255508880537 24.668346967352054 24.89716265015845 41 25.082527125320365 24.874993293473473 25.073152727802285 24.969326853403878 42 25.476653598994837 24.758629350788866 24.79889955620229 24.965817494014008 43 25.356413437228788 24.52342600279235 24.91450794309649 25.20565261688238 44 25.118097237126047 24.8159263233612 24.790514486515807 25.27546195299695 45 25.255793605778926 24.983520960512802 24.673927270540432 25.086758163167843 46 25.29849624281802 24.75506828961992 24.588272403800516 25.358163063761545 47 25.282897836044544 24.75887429271856 24.83375164420641 25.12447622703049 48 25.308316966999456 24.926963208324217 24.440188837325028 25.324530987351295 49 25.36634604386365 24.759886655888835 24.61449205636075 25.259275243886766 50 25.444505303051297 24.9207151233507 24.411664649292288 25.22311492430572 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 7.5 2 14.0 3 39.5 4 65.0 5 76.5 6 88.0 7 90.0 8 92.0 9 108.0 10 124.0 11 219.0 12 314.0 13 627.0 14 940.0 15 1354.5 16 1769.0 17 1792.5 18 1816.0 19 1920.0 20 2024.0 21 2510.5 22 2997.0 23 3980.0 24 4963.0 25 6497.0 26 8031.0 27 10410.0 28 12789.0 29 16146.0 30 19503.0 31 23586.0 32 27669.0 33 32322.5 34 36976.0 35 42570.0 36 48164.0 37 53289.5 38 58415.0 39 64051.0 40 69687.0 41 77361.5 42 85036.0 43 90171.0 44 95306.0 45 102763.0 46 110220.0 47 115350.5 48 120481.0 49 125662.5 50 130844.0 51 132742.5 52 134641.0 53 134964.0 54 135287.0 55 131880.5 56 128474.0 57 122092.5 58 115711.0 59 106223.0 60 96735.0 61 85721.5 62 74708.0 63 65133.5 64 55559.0 65 46933.5 66 38308.0 67 32400.0 68 26492.0 69 22442.5 70 18393.0 71 15131.0 72 11869.0 73 10036.0 74 8203.0 75 6621.5 76 5040.0 77 4203.5 78 3367.0 79 2866.0 80 2365.0 81 1854.5 82 1344.0 83 1012.5 84 681.0 85 486.5 86 292.0 87 227.5 88 163.0 89 118.5 90 74.0 91 51.5 92 29.0 93 23.0 94 17.0 95 19.5 96 22.0 97 20.5 98 19.0 99 13.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03012744321183307 2 0.004009131386310467 3 2.3583125801826277E-4 4 0.0 5 0.0 6 2.9478907252282845E-4 7 0.0 8 0.0 9 0.0 10 1.1791562900913139E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.485359595502226E-4 17 0.0 18 1.1791562900913139E-4 19 0.0 20 3.5374688702739413E-4 21 5.8957814504565693E-5 22 0.0 23 0.0 24 8.843672175684853E-4 25 2.3583125801826277E-4 26 3.5374688702739413E-4 27 3.5374688702739413E-4 28 0.0011201984755867481 29 5.306203305410912E-4 30 8.843672175684853E-4 31 5.306203305410912E-4 32 8.843672175684853E-4 33 1.1791562900913139E-4 34 8.843672175684853E-4 35 2.9478907252282845E-4 36 2.9478907252282845E-4 37 0.0019456078786506679 38 0.0 39 8.843672175684853E-4 40 1.7687344351369707E-4 41 0.0011201984755867481 42 0.005011414232888084 43 0.0037733001282922044 44 0.004009131386310467 45 0.0020045656931552336 46 0.002535186023696325 47 0.0012381141045958795 48 0.00383225794279677 49 0.0031837219832465476 50 0.0017097766206324052 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1696128.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.56829559559784 #Duplication Level Percentage of deduplicated Percentage of total 1 61.53885125807048 26.811428622251427 2 16.499373571421945 14.376991698038122 3 7.8612693500755 10.275063204021082 4 4.332200406835489 7.549863516175112 5 2.6371911369877488 5.74489614991865 6 1.7842820063558074 4.664287552728973 7 1.2101609411789374 3.690725472247159 8 0.8482429813633854 2.9565200759144936 9 0.6292625198564654 2.4674305925103517 >10 2.566844074476467 17.957734567893652 >50 0.07256047739522116 2.1178393687820334 >100 0.019625010713742872 1.3555757929327223 >500 1.3626526886583104E-4 0.031643386586209556 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.8957814504565693E-5 0.0 10 0.0 0.0 0.0 5.8957814504565693E-5 0.0 11 0.0 0.0 0.0 5.8957814504565693E-5 0.0 12 0.0 0.0 0.0 5.8957814504565693E-5 0.0 13 0.0 0.0 0.0 5.8957814504565693E-5 0.0 14 0.0 0.0 0.0 5.8957814504565693E-5 0.0 15 0.0 0.0 0.0 5.8957814504565693E-5 0.0 16 0.0 0.0 0.0 5.8957814504565693E-5 0.0 17 0.0 0.0 0.0 5.8957814504565693E-5 0.0 18 0.0 0.0 0.0 1.1791562900913139E-4 0.0 19 0.0 0.0 0.0 1.1791562900913139E-4 0.0 20 0.0 0.0 0.0 1.7687344351369707E-4 0.0 21 0.0 0.0 0.0 3.5374688702739413E-4 0.0 22 0.0 0.0 0.0 3.5374688702739413E-4 0.0 23 0.0 0.0 0.0 4.7166251603652555E-4 0.0 24 0.0 0.0 0.0 5.895781450456569E-4 0.0 25 0.0 0.0 0.0 5.895781450456569E-4 0.0 26 0.0 0.0 0.0 8.254094030639197E-4 0.0 27 0.0 0.0 0.0 0.0012381141045958795 5.8957814504565693E-5 28 0.0 0.0 0.0 0.0015329031771187081 5.8957814504565693E-5 29 0.0 0.0 0.0 0.0019456078786506679 5.8957814504565693E-5 30 0.0 0.0 0.0 0.002181439136668931 5.8957814504565693E-5 31 0.0 0.0 0.0 0.0030658063542374162 5.8957814504565693E-5 32 0.0 0.0 0.0 0.004362878273337862 5.8957814504565693E-5 33 0.0 0.0 0.0 0.006780148668025055 5.8957814504565693E-5 34 0.0 0.0 0.0 0.008843672175684854 5.8957814504565693E-5 35 0.0 0.0 0.0 0.011555731642894876 5.8957814504565693E-5 36 0.0 0.0 0.0 0.01491632706965512 5.8957814504565693E-5 37 0.0 0.0 0.0 0.01916128971398385 5.8957814504565693E-5 38 0.0 0.0 0.0 0.025941438382008904 5.8957814504565693E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1500 0.0 26.264544 1 GGTATCA 685 0.0 25.061792 1 TATCGCA 85 6.1150804E-6 20.706173 15 TTCGACG 55 0.004483979 20.000282 12 TAGCGCC 55 0.00448551 19.999102 4 ATAGACG 225 0.0 19.554678 3 TATCAAC 2175 0.0 18.307224 2 TCAACGC 2235 0.0 17.618896 4 ATCAACG 2250 0.0 17.59921 3 GTTATAT 115 4.257581E-6 17.224743 1 CAACGCA 2320 0.0 16.878553 5 CGTCGTA 105 3.776289E-5 16.761646 10 AACGCAG 2385 0.0 16.41855 6 ATACCGT 190 6.184564E-10 16.209797 6 GTCCTAA 305 0.0 15.875628 1 ACCGTAT 140 1.5877904E-6 15.713581 8 TAGGACA 365 0.0 15.670528 4 ATAGCGT 85 0.0029814946 15.528715 6 CTAGCGG 100 4.9457327E-4 15.399763 29 GCGTGTC 100 4.9468403E-4 15.399309 9 >>END_MODULE