##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061984_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4794264 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30467095679337 32.0 32.0 32.0 32.0 32.0 2 31.4471203504855 32.0 32.0 32.0 32.0 32.0 3 31.559869043506993 32.0 32.0 32.0 32.0 32.0 4 31.639685465798294 32.0 32.0 32.0 32.0 32.0 5 31.613032573925842 32.0 32.0 32.0 32.0 32.0 6 35.25214172602927 36.0 36.0 36.0 36.0 36.0 7 35.25534159153522 36.0 36.0 36.0 36.0 36.0 8 35.207925762953394 36.0 36.0 36.0 36.0 36.0 9 35.29250934032836 36.0 36.0 36.0 36.0 36.0 10 35.1710500297856 36.0 36.0 36.0 36.0 36.0 11 35.29446793084403 36.0 36.0 36.0 36.0 36.0 12 35.22298313150882 36.0 36.0 36.0 36.0 36.0 13 35.249582000490584 36.0 36.0 36.0 36.0 36.0 14 35.21505761885453 36.0 36.0 36.0 36.0 36.0 15 35.192861302589925 36.0 36.0 36.0 36.0 36.0 16 35.20791512524133 36.0 36.0 36.0 36.0 36.0 17 35.19105852326864 36.0 36.0 36.0 36.0 36.0 18 35.18435363592827 36.0 36.0 36.0 36.0 36.0 19 35.17666799325194 36.0 36.0 36.0 36.0 36.0 20 35.17673870274979 36.0 36.0 36.0 36.0 36.0 21 35.17215989774447 36.0 36.0 36.0 36.0 36.0 22 35.152543122364555 36.0 36.0 36.0 36.0 36.0 23 35.12139506710519 36.0 36.0 36.0 36.0 36.0 24 35.109930325071794 36.0 36.0 36.0 36.0 36.0 25 35.098657479020765 36.0 36.0 36.0 36.0 36.0 26 35.05775026156257 36.0 36.0 36.0 36.0 36.0 27 35.04072658493566 36.0 36.0 36.0 36.0 36.0 28 35.02544206994025 36.0 36.0 36.0 36.0 36.0 29 35.0064852498736 36.0 36.0 36.0 36.0 36.0 30 34.988597624160874 36.0 36.0 36.0 36.0 36.0 31 34.98392912864206 36.0 36.0 36.0 36.0 36.0 32 34.96192992292456 36.0 36.0 36.0 36.0 36.0 33 34.94458815784863 36.0 36.0 36.0 36.0 36.0 34 34.9354743501818 36.0 36.0 36.0 36.0 36.0 35 34.92075947423838 36.0 36.0 36.0 36.0 36.0 36 34.9039026636831 36.0 36.0 36.0 32.0 36.0 37 34.88991365515124 36.0 36.0 36.0 32.0 36.0 38 34.88336603908337 36.0 36.0 36.0 32.0 36.0 39 34.86504935898399 36.0 36.0 36.0 32.0 36.0 40 34.85648328919726 36.0 36.0 36.0 32.0 36.0 41 34.83398014794346 36.0 36.0 36.0 32.0 36.0 42 34.81297880133426 36.0 36.0 36.0 32.0 36.0 43 34.80094254300556 36.0 36.0 36.0 32.0 36.0 44 34.77614561901472 36.0 36.0 36.0 32.0 36.0 45 34.75600696999581 36.0 36.0 36.0 32.0 36.0 46 34.74254901273689 36.0 36.0 36.0 32.0 36.0 47 34.720144531047936 36.0 36.0 36.0 32.0 36.0 48 34.69669671924616 36.0 36.0 36.0 32.0 36.0 49 34.68258506415166 36.0 36.0 36.0 32.0 36.0 50 34.27322295977026 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 14.0 20 40.0 21 108.0 22 332.0 23 825.0 24 2144.0 25 5295.0 26 11173.0 27 20977.0 28 36577.0 29 58694.0 30 88186.0 31 130239.0 32 197666.0 33 336079.0 34 771986.0 35 3133928.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99661574284654 17.36057152633753 12.222342773922442 26.420469956893495 2 16.388105043937962 19.79915862055155 36.61475351019768 27.197982825312806 3 18.96913723422362 23.33427751876412 27.755818629626788 29.94076661738547 4 13.410609011101599 15.80280101387825 34.2358284817023 36.55076149331784 5 15.422763535758566 35.89155707737413 32.567146907220796 16.11853247964651 6 35.31625566772224 33.51466150938185 16.712464546100396 14.456618276795513 7 31.267698232721436 29.489907105657924 19.916821434948094 19.32557322667254 8 28.60818678320593 32.56107715386554 18.803261564235928 20.027474498692605 9 27.387728335360755 14.95764521937048 18.157510725316754 39.497115719952006 10 16.81230604418365 26.614148329815933 30.507698578008462 26.06584704799195 11 36.759636098471006 21.274235211077237 21.972110839119413 19.99401785133234 12 25.296421994371187 22.901288477499044 28.041828326898212 23.760461201231557 13 29.710253753235115 19.565088614227335 24.822099909391724 25.902557723145826 14 24.054703704259925 18.81137542696856 24.819930650460634 32.313990218310884 15 25.47896820033273 26.5940298656895 21.826061309932037 26.100940624045734 16 26.16883114174235 25.491121209352734 23.036464219310112 25.303583429594802 17 24.836784123694482 25.538956553080933 24.52263788560663 25.101621437617954 18 25.085649315149638 25.115768672489324 25.129535137755386 24.669046874605648 19 26.008272804391414 24.618298996112646 24.77705123811522 24.596376961380717 20 26.297778859629528 24.28536773955629 24.540861352841706 24.875992047972478 21 26.36133076609721 23.98344604100611 24.43502762991001 25.220195562986664 22 26.250619490290898 23.942235971986527 24.44231273037947 25.36483180734311 23 25.2877137894662 24.02864591644051 24.79260098688828 25.89103930720501 24 25.30923708517218 24.39455193735454 24.67224060315989 25.623970374313394 25 25.56838364600283 24.007911138606993 24.83294060617994 25.590764609210236 26 25.31016914258968 24.421206368727134 24.91454848204272 25.35407600664047 27 25.544460530874442 24.50738292046645 24.507674937492713 25.440481611166398 28 25.545388632421368 24.273642546112008 24.620165717046195 25.560803104420426 29 25.475194837809674 24.56750219638383 24.574698325742286 25.38260464006421 30 25.521567292505697 24.570502214757653 24.56764459751817 25.34028589521848 31 25.66130850634459 24.125070787996858 24.46664699029774 25.74697371536081 32 25.615912124384494 24.435827143080925 24.33875213772553 25.609508594809054 33 25.409578756240542 24.365683510785306 24.615941371495676 25.608796361478475 34 25.72777573713073 24.27046172785583 24.67634538260672 25.325417152406715 35 25.774109126072403 24.334072482198998 24.654518649724995 25.237299742003604 36 25.407054902169367 24.532612470550692 24.605595655633667 25.454736971646273 37 25.92071359723198 24.223492231949972 24.308699552729358 25.54709461808869 38 25.561921496187946 24.41329889217615 24.505096089827344 25.519683521808563 39 25.81234981978374 24.387661026565212 24.294883026298226 25.50510612735282 40 25.883327145378015 24.359650915886917 24.456183018860052 25.30083891987502 41 25.471261068818208 24.49512547528676 24.617669101339093 25.41594435455594 42 25.81299871799204 24.46430381711299 24.39797148210216 25.324725982792806 43 25.680365052969893 24.221054291533413 24.432170418127157 25.666410237369536 44 25.467846046501442 24.443262422442842 24.468710660830258 25.620180870225457 45 25.548083958886615 24.520728987542334 24.360387938982377 25.570799114588677 46 25.655499967147566 24.326592847763898 24.360363066352537 25.657544118736002 47 25.646181440377052 24.458017317998422 24.546415744181047 25.34938549744348 48 25.738270236985727 24.78815380084121 24.124580416867264 25.3489955453058 49 25.669391429720473 24.493184893960354 24.151157182978256 25.68626649334092 50 25.53110229486586 24.807474896645516 24.263002223529362 25.398420584959265 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 180.0 1 139.0 2 98.0 3 305.0 4 512.0 5 497.5 6 483.0 7 429.0 8 375.0 9 499.5 10 624.0 11 1036.0 12 1448.0 13 2593.0 14 3738.0 15 4746.5 16 5755.0 17 5435.5 18 5116.0 19 5028.5 20 4941.0 21 5938.0 22 6935.0 23 8612.5 24 10290.0 25 13457.5 26 16625.0 27 21414.5 28 26204.0 29 32750.0 30 39296.0 31 48612.5 32 57929.0 33 69457.0 34 80985.0 35 96455.5 36 111926.0 37 129347.0 38 146768.0 39 167033.5 40 187299.0 41 208297.5 42 229296.0 43 246366.0 44 263436.0 45 287809.5 46 312183.0 47 332301.0 48 352419.0 49 369023.5 50 385628.0 51 393798.0 52 401968.0 53 402856.5 54 403745.0 55 393147.5 56 382550.0 57 366488.5 58 350427.0 59 325412.0 60 300397.0 61 264231.5 62 228066.0 63 195866.0 64 163666.0 65 136416.5 66 109167.0 67 91920.0 68 74673.0 69 62725.0 70 50777.0 71 39988.0 72 29199.0 73 24648.5 74 20098.0 75 15835.0 76 11572.0 77 9439.0 78 7306.0 79 6047.0 80 4788.0 81 3717.5 82 2647.0 83 2092.5 84 1538.0 85 1119.5 86 701.0 87 467.0 88 233.0 89 158.0 90 83.0 91 66.0 92 49.0 93 45.0 94 41.0 95 36.0 96 31.0 97 33.0 98 35.0 99 26.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03095365628592835 2 0.004839116077045403 3 1.6686607162225527E-4 4 0.0 5 0.0 6 2.0858258952781907E-4 7 0.0 8 0.0 9 0.0 10 4.171651790556382E-5 11 0.0 12 2.085825895278191E-5 13 0.0 14 0.0 15 0.0 16 6.257477685834573E-4 17 0.0 18 1.0429129476390954E-4 19 2.085825895278191E-5 20 3.128738842917286E-4 21 6.257477685834572E-5 22 0.0 23 6.257477685834572E-5 24 9.594799118279678E-4 25 2.2944084848060096E-4 26 5.214564738195477E-4 27 4.797399559139839E-4 28 0.0014183616087891698 29 4.1716517905563815E-4 30 0.0012514955371669145 31 3.9630692010285623E-4 32 6.883225454418029E-4 33 1.8772433057503719E-4 34 6.883225454418029E-4 35 2.2944084848060096E-4 36 1.8772433057503719E-4 37 0.001564369421458643 38 0.0 39 5.005982148667658E-4 40 8.343303581112764E-5 41 0.001105487724497441 42 0.004630533487517583 43 0.00458881696961202 44 0.0045679587106592385 45 0.0022526919669004462 46 0.002064967636325409 47 0.0012723537961196964 48 0.00458881696961202 49 0.004338517862178637 50 0.0017520937520336803 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4794264.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.797457664714806 #Duplication Level Percentage of deduplicated Percentage of total 1 69.39485234056674 31.781078122162405 2 15.756081002014986 14.43176905303197 3 5.774239225372095 7.933364294097424 4 2.687927122450992 4.924009143851521 5 1.5460075089380512 3.5401606719960803 6 0.9776783635682864 2.6865110079135754 7 0.6675355624380196 2.1400002162312757 8 0.47656363771585164 1.7460322418267362 9 0.345932821915143 1.425855938984468 >10 2.147323299363454 18.300121186265127 >50 0.1599513054070293 4.994717337619101 >100 0.06269313316586589 4.909502868598812 >500 0.002525818083578096 0.7739778127606042 >1k 6.888589998326903E-4 0.41290010466071436 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.343303581112764E-5 2 0.0 0.0 0.0 0.0 8.343303581112764E-5 3 0.0 0.0 0.0 0.0 8.343303581112764E-5 4 0.0 0.0 0.0 0.0 8.343303581112764E-5 5 0.0 0.0 0.0 0.0 8.343303581112764E-5 6 0.0 0.0 0.0 0.0 1.0429129476390954E-4 7 0.0 0.0 0.0 0.0 1.0429129476390954E-4 8 0.0 0.0 0.0 0.0 1.0429129476390954E-4 9 0.0 0.0 0.0 0.0 1.2514955371669144E-4 10 0.0 0.0 0.0 0.0 1.2514955371669144E-4 11 0.0 0.0 0.0 0.0 1.4600781266947336E-4 12 0.0 0.0 0.0 0.0 3.128738842917286E-4 13 0.0 0.0 0.0 0.0 3.9630692010285623E-4 14 0.0 0.0 0.0 2.085825895278191E-5 3.9630692010285623E-4 15 0.0 0.0 0.0 4.171651790556382E-5 6.257477685834573E-4 16 0.0 0.0 0.0 4.171651790556382E-5 6.883225454418029E-4 17 0.0 0.0 0.0 4.171651790556382E-5 6.883225454418029E-4 18 0.0 2.085825895278191E-5 0.0 4.171651790556382E-5 8.551886170640583E-4 19 0.0 2.085825895278191E-5 0.0 4.171651790556382E-5 8.551886170640583E-4 20 0.0 6.257477685834572E-5 0.0 4.171651790556382E-5 9.386216528751858E-4 21 0.0 6.257477685834572E-5 0.0 4.171651790556382E-5 0.0010429129476390955 22 0.0 6.257477685834572E-5 0.0 6.257477685834572E-5 0.0010846294655446592 23 0.0 6.257477685834572E-5 0.0 1.4600781266947336E-4 0.001147204242403005 24 0.0 6.257477685834572E-5 0.0 3.9630692010285623E-4 0.0011680625013557868 25 0.0 6.257477685834572E-5 0.0 4.797399559139839E-4 0.0011680625013557868 26 0.0 6.257477685834572E-5 0.0 6.674642864890211E-4 0.0012097790192613506 27 0.0 6.257477685834572E-5 0.0 8.551886170640583E-4 0.0012514955371669145 28 0.0 6.257477685834572E-5 0.0 0.0010429129476390955 0.0012514955371669145 29 0.0 6.257477685834572E-5 0.0 0.0013975033498363877 0.0012514955371669145 30 0.0 6.257477685834572E-5 0.0 0.0023569832616643555 0.0012514955371669145 31 0.0 6.257477685834572E-5 0.0 0.003942210942075781 0.0012514955371669145 32 0.0 6.257477685834572E-5 0.0 0.005756879470967807 0.0013349285729780422 33 0.0 6.257477685834572E-5 0.0 0.007404681928237577 0.0013349285729780422 34 0.0 6.257477685834572E-5 0.0 0.009219350457129603 0.0014183616087891698 35 0.0 6.257477685834572E-5 0.0 0.01180577456727456 0.0014183616087891698 36 0.0 6.257477685834572E-5 0.0 0.014955371669144627 0.0014183616087891698 37 0.0 6.257477685834572E-5 0.0 0.020378518996867923 0.0014183616087891698 38 0.0 6.257477685834572E-5 0.0 0.027595476594530464 0.0014392198677419517 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4810 0.0 27.269798 1 GGTATCA 2030 0.0 24.718353 1 TATCAAC 7470 0.0 17.817545 2 TCAACGC 7550 0.0 17.220095 4 ATCAACG 7700 0.0 16.941776 3 TATAACG 130 7.329636E-7 16.922705 2 CAACGCA 7745 0.0 16.814938 5 AACGCAG 8085 0.0 16.189444 6 CGTCGTA 575 0.0 14.1557665 10 GTATAGG 685 0.0 14.13653 1 GTATATA 605 0.0 13.823212 1 GTCCTAA 655 0.0 13.440005 1 ACCGTCG 590 0.0 13.422873 8 GTACATG 14865 0.0 13.309922 1 TATAGGG 365 0.0 13.259982 2 CGCAATA 470 0.0 13.106368 36 ATTAGAC 320 3.6379788E-12 13.0616665 3 ACGCAGA 10015 0.0 13.047595 7 TACATGG 15345 0.0 12.874269 2 ATACGAA 445 0.0 12.854856 40 >>END_MODULE