##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061983_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 886954 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.263116238271657 32.0 32.0 32.0 32.0 32.0 2 31.441651990971348 32.0 32.0 32.0 32.0 32.0 3 31.575835950906136 32.0 32.0 32.0 32.0 32.0 4 31.658881971331095 32.0 32.0 32.0 32.0 32.0 5 31.630496057292714 32.0 32.0 32.0 32.0 32.0 6 35.287709396428674 36.0 36.0 36.0 36.0 36.0 7 35.29509083898376 36.0 36.0 36.0 36.0 36.0 8 35.236005474917526 36.0 36.0 36.0 36.0 36.0 9 35.32224444559695 36.0 36.0 36.0 36.0 36.0 10 35.2045201893221 36.0 36.0 36.0 36.0 36.0 11 35.32071449026669 36.0 36.0 36.0 36.0 36.0 12 35.247910263666434 36.0 36.0 36.0 36.0 36.0 13 35.28090070060003 36.0 36.0 36.0 36.0 36.0 14 35.241878383771876 36.0 36.0 36.0 36.0 36.0 15 35.22505000259314 36.0 36.0 36.0 36.0 36.0 16 35.238837639832504 36.0 36.0 36.0 36.0 36.0 17 35.21448801177964 36.0 36.0 36.0 36.0 36.0 18 35.21261869273942 36.0 36.0 36.0 36.0 36.0 19 35.200066745287806 36.0 36.0 36.0 36.0 36.0 20 35.200846943584445 36.0 36.0 36.0 36.0 36.0 21 35.184216994342435 36.0 36.0 36.0 36.0 36.0 22 35.17844330145645 36.0 36.0 36.0 36.0 36.0 23 35.13332822220769 36.0 36.0 36.0 36.0 36.0 24 35.126668350331585 36.0 36.0 36.0 36.0 36.0 25 35.1034878922695 36.0 36.0 36.0 36.0 36.0 26 35.05892639302602 36.0 36.0 36.0 36.0 36.0 27 35.05044906500224 36.0 36.0 36.0 36.0 36.0 28 35.027444489793155 36.0 36.0 36.0 36.0 36.0 29 35.00421780610945 36.0 36.0 36.0 36.0 36.0 30 34.982609019182505 36.0 36.0 36.0 36.0 36.0 31 34.98383794424514 36.0 36.0 36.0 36.0 36.0 32 34.95420168351459 36.0 36.0 36.0 36.0 36.0 33 34.94558342371758 36.0 36.0 36.0 36.0 36.0 34 34.93027485078144 36.0 36.0 36.0 36.0 36.0 35 34.90279540990852 36.0 36.0 36.0 36.0 36.0 36 34.88840571213389 36.0 36.0 36.0 32.0 36.0 37 34.87327527695912 36.0 36.0 36.0 32.0 36.0 38 34.848942560719046 36.0 36.0 36.0 32.0 36.0 39 34.8240720488323 36.0 36.0 36.0 32.0 36.0 40 34.8213853255073 36.0 36.0 36.0 32.0 36.0 41 34.79783957228898 36.0 36.0 36.0 32.0 36.0 42 34.7624972659236 36.0 36.0 36.0 32.0 36.0 43 34.76577703015038 36.0 36.0 36.0 32.0 36.0 44 34.711971534036714 36.0 36.0 36.0 32.0 36.0 45 34.69558736980723 36.0 36.0 36.0 32.0 36.0 46 34.67229191141818 36.0 36.0 36.0 32.0 36.0 47 34.642468493292775 36.0 36.0 36.0 32.0 36.0 48 34.609333742223384 36.0 36.0 36.0 32.0 36.0 49 34.59365536431427 36.0 36.0 36.0 32.0 36.0 50 34.18254159742219 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 20.0 22 71.0 23 192.0 24 412.0 25 982.0 26 2086.0 27 4096.0 28 6876.0 29 10812.0 30 16096.0 31 23730.0 32 36563.0 33 63244.0 34 144951.0 35 576812.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93375324946289 17.998500031014398 12.261062271268827 25.80668444825389 2 16.18552377000753 19.460918508629906 37.77426498112561 26.579292740236955 3 19.20207542468524 22.680170606944465 28.229518879847927 29.888235088522364 4 12.767643832311295 15.898023908820422 34.82879025156914 36.50554200729915 5 14.684430854848001 36.680861330870975 33.07300386829967 15.561703945981353 6 35.61932185885627 34.558049233669394 16.0938447766175 13.728784130856841 7 31.300495854350956 29.847432899564126 19.322760819614096 19.52931042647082 8 28.17023205262054 33.951366136237056 18.34525804043953 19.53314377070288 9 26.763056483199804 14.762659619326367 18.493067284210905 39.98121661326292 10 16.931149522352417 26.766642125664212 30.580043316936333 25.722165035047034 11 37.52821454100213 21.310462549354305 21.47777675054174 19.683546159101827 12 24.65539362807992 23.49467954369674 28.421879826913234 23.4280470013101 13 29.911697788160378 19.29976075422175 24.83386962570776 25.954671831910108 14 23.367277220690138 19.70575700656404 24.795310692550007 32.13165508019581 15 25.142566581806946 27.41359754846362 21.777341327735147 25.666494541994282 16 25.908846967353217 25.954509170774386 23.542079129779875 24.594564732092525 17 24.04668111311297 26.37216811694857 24.785050859458327 24.796099910480137 18 24.76202180278279 25.352133319653507 25.972235219307493 23.913609658256206 19 25.76480854700469 25.00817404284777 24.94176699129831 24.28525041884923 20 25.89923028615947 24.595215304531358 24.834461352518115 24.671093056791058 21 26.545683316158446 24.23507870757672 24.58797186776315 24.63126610850168 22 25.844857794203534 24.51231969188932 25.004453444034304 24.638369069872844 23 24.581658124322118 24.493716697821984 25.411802641399667 25.51282253645623 24 24.87609138795685 24.863801998773315 25.37420626330411 24.885900349965727 25 24.999492645616346 24.603643480947152 25.415635985631724 24.98122788780478 26 24.5121494737032 25.652459208615575 25.519081077668236 24.31631024001299 27 25.058458763177182 24.961948249619482 25.129150459439654 24.850442527763686 28 24.772221702330604 24.950926615982873 25.36888189352795 24.907969788158574 29 24.553103835499368 24.987626148456904 25.247843454711706 25.211426561332022 30 24.72740638349928 25.128672304759153 25.45958421228873 24.68433709945284 31 25.24189638649304 24.772196854388636 24.872653475393204 25.113253283725122 32 24.968853902535546 25.01823667426199 24.832882161206562 25.180027261995896 33 24.68205720264456 24.742939865967944 25.30993785458514 25.26506507680235 34 25.23270811817604 25.003382385438606 25.326061956281542 24.437847540103817 35 25.45690080883563 24.76689884706535 25.427925236258027 24.348275107840994 36 24.476945227086443 25.26436011829263 25.254438510270553 25.00425614435038 37 25.321412263443616 25.035825220278596 24.91022554949856 24.732536966779225 38 24.904561003163636 24.777496916412804 25.212355995914105 25.105586084509458 39 25.399318337356487 24.72656263212428 24.870764835407673 25.003354195111555 40 25.653783233158915 24.9478833714977 25.07404563714199 24.324287758201393 41 24.637293899051123 25.122668398455822 25.77829039939387 24.461747303099184 42 25.578998758623957 25.289344348243752 25.045691883926267 24.085965009206024 43 25.10496953515747 24.69174359922609 25.3275365194763 24.875750346140144 44 24.592971600467237 25.19426867933378 25.033261323507528 25.179498396691457 45 24.70789986684541 25.418997247837787 25.052681187770524 24.82042169754628 46 24.725883683356614 25.042928447326258 24.961299567840474 25.26988830147665 47 24.954647490644813 25.006849384570113 25.18262206843522 24.85588105634986 48 25.442038348701228 25.33052810080797 24.476555787821592 24.75087776266921 49 24.945964504006575 25.387381231840184 24.508945030932995 25.157709233220242 50 24.96349805341743 25.655428389100038 24.53336700720117 24.847706550281362 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 249.0 1 139.5 2 30.0 3 69.0 4 108.0 5 120.5 6 133.0 7 105.0 8 77.0 9 110.0 10 143.0 11 263.0 12 383.0 13 676.5 14 970.0 15 1221.5 16 1473.0 17 1544.5 18 1616.0 19 1592.5 20 1569.0 21 1855.5 22 2142.0 23 2576.0 24 3010.0 25 3921.0 26 4832.0 27 6458.5 28 8085.0 29 9801.5 30 11518.0 31 13108.0 32 14698.0 33 17165.0 34 19632.0 35 22669.0 36 25706.0 37 29472.5 38 33239.0 39 35936.5 40 38634.0 41 41393.0 42 44152.0 43 45990.5 44 47829.0 45 51973.0 46 56117.0 47 59971.5 48 63826.0 49 66471.0 50 69116.0 51 67719.5 52 66323.0 53 66478.5 54 66634.0 55 66528.5 56 66423.0 57 63680.5 58 60938.0 59 56424.5 60 51911.0 61 45111.0 62 38311.0 63 33213.0 64 28115.0 65 23653.0 66 19191.0 67 16563.0 68 13935.0 69 12207.0 70 10479.0 71 8029.5 72 5580.0 73 4921.5 74 4263.0 75 3059.0 76 1855.0 77 1644.5 78 1434.0 79 1215.5 80 997.0 81 787.0 82 577.0 83 461.5 84 346.0 85 284.5 86 223.0 87 145.5 88 68.0 89 45.0 90 22.0 91 15.5 92 9.0 93 7.5 94 6.0 95 8.0 96 10.0 97 11.0 98 12.0 99 8.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030328517600687294 2 0.004284325906416793 3 3.382362557697468E-4 4 1.1274541858991558E-4 5 1.1274541858991558E-4 6 0.0 7 0.0 8 0.0 9 0.0 10 3.382362557697468E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.764725115394936E-4 17 0.0 18 3.382362557697468E-4 19 0.0 20 1.1274541858991558E-4 21 0.0 22 0.0 23 0.0 24 0.001127454185899156 25 0.0 26 2.2549083717983117E-4 27 4.5098167435966233E-4 28 0.0019166721160285651 29 3.382362557697468E-4 30 0.0012401996044890716 31 4.5098167435966233E-4 32 5.63727092949578E-4 33 2.2549083717983117E-4 34 6.764725115394936E-4 35 0.0 36 1.1274541858991558E-4 37 0.0010147087673092403 38 0.0 39 5.63727092949578E-4 40 1.1274541858991558E-4 41 0.001127454185899156 42 0.003946089650647046 43 0.003382362557697468 44 0.004284325906416793 45 0.001691181278848734 46 0.0014656904416689028 47 0.0014656904416689028 48 0.004509816743596624 49 0.004171580487826877 50 0.001691181278848734 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 886954.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.801017308209914 #Duplication Level Percentage of deduplicated Percentage of total 1 77.44915437030323 47.86436529745332 2 14.300924845373228 17.676234077846402 3 4.138757244606093 7.6733822432514085 4 1.622889350897859 4.0118485145659255 5 0.7618311322907656 2.3540969496317383 6 0.42738852578758657 1.5847827407717376 7 0.26006007273408804 1.1250383939349593 8 0.18207048313437305 0.9001712863601223 9 0.12699837797025443 0.706376605954885 >10 0.625878990530544 7.0676767310557675 >50 0.05533504554483065 2.393555066564384 >100 0.04577048553610543 5.424443209548678 >500 0.002941075290992088 1.218028883060653 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 912 0.10282382175400301 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.254908371798312E-4 2 0.0 0.0 0.0 0.0 2.254908371798312E-4 3 0.0 0.0 0.0 0.0 2.254908371798312E-4 4 0.0 0.0 0.0 0.0 2.254908371798312E-4 5 0.0 0.0 0.0 0.0 2.254908371798312E-4 6 0.0 0.0 0.0 0.0 2.254908371798312E-4 7 0.0 0.0 0.0 1.127454185899156E-4 2.254908371798312E-4 8 1.127454185899156E-4 0.0 0.0 1.127454185899156E-4 2.254908371798312E-4 9 1.127454185899156E-4 0.0 0.0 1.127454185899156E-4 2.254908371798312E-4 10 1.127454185899156E-4 0.0 0.0 1.127454185899156E-4 2.254908371798312E-4 11 1.127454185899156E-4 0.0 0.0 1.127454185899156E-4 2.254908371798312E-4 12 1.127454185899156E-4 0.0 0.0 1.127454185899156E-4 3.382362557697468E-4 13 1.127454185899156E-4 0.0 0.0 2.254908371798312E-4 4.509816743596624E-4 14 1.127454185899156E-4 0.0 0.0 2.254908371798312E-4 4.509816743596624E-4 15 1.127454185899156E-4 0.0 0.0 7.892179301294092E-4 6.764725115394936E-4 16 1.127454185899156E-4 0.0 0.0 0.001127454185899156 7.892179301294092E-4 17 1.127454185899156E-4 0.0 0.0 0.0013529450230789872 7.892179301294092E-4 18 1.127454185899156E-4 0.0 0.0 0.0018039266974386496 9.019633487193248E-4 19 1.127454185899156E-4 0.0 0.0 0.002029417534618481 9.019633487193248E-4 20 1.127454185899156E-4 0.0 0.0 0.0025931446275680586 0.0010147087673092405 21 1.127454185899156E-4 0.0 0.0 0.0025931446275680586 0.0013529450230789872 22 1.127454185899156E-4 0.0 0.0 0.003382362557697468 0.0014656904416689028 23 1.127454185899156E-4 0.0 0.0 0.0049607984179562865 0.0014656904416689028 24 1.127454185899156E-4 0.0 0.0 0.006539234278215105 0.0014656904416689028 25 1.127454185899156E-4 0.0 0.0 0.00845590639424367 0.0014656904416689028 26 1.127454185899156E-4 0.0 0.0 0.009357869742962995 0.0014656904416689028 27 1.127454185899156E-4 0.0 0.0 0.010823560184631898 0.0015784358602588184 28 1.127454185899156E-4 0.0 0.0 0.011387287277581476 0.001691181278848734 29 1.127454185899156E-4 0.0 0.0 0.012852977719250378 0.001691181278848734 30 1.127454185899156E-4 0.0 0.0 0.01668632195130751 0.001691181278848734 31 1.127454185899156E-4 0.0 0.0 0.022098102043623457 0.0018039266974386496 32 1.127454185899156E-4 0.0 0.0 0.027735372973119236 0.0018039266974386496 33 1.127454185899156E-4 0.0 0.0 0.03337264390261502 0.0018039266974386496 34 1.127454185899156E-4 0.0 0.0 0.03991187818083012 0.0019166721160285651 35 1.127454185899156E-4 0.0 0.0 0.046225621621865394 0.0019166721160285651 36 1.127454185899156E-4 0.0 0.0 0.05456878259751915 0.0019166721160285651 37 1.127454185899156E-4 0.0 0.0 0.06888745075843843 0.0019166721160285651 38 1.127454185899156E-4 0.0 0.0 0.08703946315141484 0.002029417534618481 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 485 0.0 26.319935 1 GTATCAA 1135 0.0 24.62671 1 TATACCC 70 3.2138552E-5 22.000225 4 AACGTAT 70 3.2152544E-5 21.998985 21 CAACGTA 80 3.6151941E-6 21.998983 20 GTCGATA 55 0.0044809585 20.001333 41 GTAGGAC 330 0.0 19.999077 3 GCCGGTT 100 1.1232423E-6 19.799088 11 GTGTAGA 240 0.0 19.2578 1 GTATTAC 115 2.011293E-7 19.138182 1 TGTAGGA 395 0.0 18.935835 2 GTGTAAG 140 4.0563464E-9 18.86478 1 GTAATAC 105 1.7923812E-6 18.856274 3 TAGGACG 225 0.0 18.577969 4 GTCCTAC 380 0.0 18.533821 1 GGCGTAC 60 0.007393294 18.340761 1 GCGTACT 60 0.007412556 18.332487 2 ATTACAC 145 6.3027983E-9 18.206059 3 GTACCGT 85 1.4301768E-4 18.117832 6 CGTCGTA 170 1.2551027E-10 18.117832 10 >>END_MODULE