##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061981_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 25876 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.166099860874944 32.0 32.0 32.0 32.0 32.0 2 30.875946823311175 32.0 32.0 32.0 32.0 32.0 3 30.800200958417065 32.0 32.0 32.0 32.0 32.0 4 30.812103880043285 32.0 32.0 32.0 32.0 32.0 5 30.85519400216417 32.0 32.0 32.0 32.0 32.0 6 34.207489565620655 36.0 36.0 36.0 32.0 36.0 7 34.23253207605503 36.0 36.0 36.0 32.0 36.0 8 34.122932447055184 36.0 36.0 36.0 32.0 36.0 9 34.32385221827176 36.0 36.0 36.0 32.0 36.0 10 34.1131164012985 36.0 36.0 36.0 32.0 36.0 11 34.28528366053486 36.0 36.0 36.0 32.0 36.0 12 34.15419693924873 36.0 36.0 36.0 32.0 36.0 13 34.243275622198176 36.0 36.0 36.0 32.0 36.0 14 34.14016849590354 36.0 36.0 36.0 32.0 36.0 15 34.031148554645235 36.0 36.0 36.0 32.0 36.0 16 34.06078992116247 36.0 36.0 36.0 32.0 36.0 17 34.07191992579997 36.0 36.0 36.0 32.0 36.0 18 34.00320760550317 36.0 36.0 36.0 32.0 36.0 19 34.07010357087649 36.0 36.0 36.0 32.0 36.0 20 34.02678157365899 36.0 36.0 36.0 32.0 36.0 21 33.935963827484926 36.0 36.0 36.0 32.0 36.0 22 33.94307466378111 36.0 36.0 36.0 32.0 36.0 23 33.932949451228936 36.0 36.0 36.0 32.0 36.0 24 33.90790694079456 36.0 36.0 36.0 32.0 36.0 25 33.304142835059515 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 5.0 6 4.0 7 1.0 8 5.0 9 2.0 10 2.0 11 0.0 12 2.0 13 1.0 14 8.0 15 24.0 16 21.0 17 22.0 18 28.0 19 33.0 20 50.0 21 54.0 22 69.0 23 96.0 24 137.0 25 194.0 26 245.0 27 335.0 28 422.0 29 627.0 30 878.0 31 1292.0 32 2025.0 33 3106.0 34 7000.0 35 9188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.25428968928737 17.066007110836296 12.55217189673829 25.127531303138046 2 17.491111454629774 19.264955943731643 36.98794249497604 26.255990106662548 3 19.489101870459113 24.509197712165715 28.002782501159373 27.9989179162158 4 13.528138528138529 15.820191713048857 35.08039579468151 35.57127396413111 5 14.601615958557234 36.79978350794448 33.834615533304984 14.763985000193298 6 34.3775379974475 35.32505704451406 16.09622152608578 14.201183431952662 7 30.057646922273378 30.502572832437036 19.979107826827097 19.46067241846249 8 29.223090613634607 31.939178209394104 18.351002089298152 20.48672908767314 9 28.98270324652711 14.731261850404366 19.018689780598226 37.2673451224703 10 17.609040597546343 28.112543055071793 29.695421649444636 24.582994697937227 11 35.81517743121396 22.208892844704152 22.092798266320962 19.88313145776092 12 26.021513697570036 23.66893669710571 27.588608574524066 22.720941030800184 13 29.433159218417487 20.437221899787193 23.041207196749856 27.088411685045465 14 25.13927576601671 18.446301454658002 26.203187867533273 30.21123491179202 15 27.288909527126382 26.21314139772463 21.434099527900315 25.06384954724866 16 26.361807489941196 25.53775920767564 23.692355307954195 24.40807799442897 17 23.77930821016792 26.05819082256442 23.91085661224174 26.25164435502592 18 25.062869965566602 25.65094595117422 25.047394281734825 24.238789801524355 19 25.99412037753365 24.311465263809374 25.29011295064212 24.404301408014852 20 27.07229335086837 24.318260936835184 24.372413259583027 24.237032452713418 21 27.388781431334625 24.21276595744681 24.460348162475825 23.93810444874275 22 25.987542074515417 24.432235849421595 23.937013966804656 25.643208109258325 23 24.82980040228996 25.878075197276807 24.528082933622155 24.76404146681108 24 24.978726696062505 24.251566488744487 25.338438926278332 25.431267888914675 25 25.057053340037903 24.569682435307314 26.29868874018489 24.074575484469886 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 1.0 2 4.5 3 8.0 4 8.0 5 8.0 6 23.5 7 39.0 8 39.0 9 39.0 10 35.5 11 32.0 12 32.0 13 32.0 14 44.5 15 57.0 16 57.0 17 57.0 18 159.0 19 261.0 20 261.0 21 261.0 22 367.0 23 473.0 24 473.0 25 473.0 26 725.5 27 978.0 28 978.0 29 978.0 30 1149.0 31 1320.0 32 1320.0 33 1320.0 34 1359.0 35 1398.0 36 1398.0 37 1398.0 38 1565.5 39 1733.0 40 1733.0 41 1733.0 42 2003.0 43 2273.0 44 2273.0 45 2273.0 46 2607.0 47 2941.0 48 2941.0 49 2941.0 50 3105.0 51 3269.0 52 3269.0 53 3269.0 54 3275.0 55 3281.0 56 3281.0 57 3281.0 58 3189.5 59 3098.0 60 3098.0 61 3098.0 62 2576.0 63 2054.0 64 2054.0 65 2054.0 66 1632.5 67 1211.0 68 1211.0 69 1211.0 70 926.0 71 641.0 72 641.0 73 641.0 74 551.0 75 461.0 76 461.0 77 461.0 78 329.5 79 198.0 80 198.0 81 198.0 82 136.5 83 75.0 84 75.0 85 75.0 86 55.0 87 35.0 88 35.0 89 35.0 90 30.0 91 25.0 92 25.0 93 25.0 94 13.0 95 1.0 96 1.0 97 1.0 98 7.0 99 13.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.015458339774308239 5 0.034781264492193535 6 0.07342711392796414 7 0.11207296336373475 8 0.1159375483073118 9 0.12753130313804295 10 0.1429896429123512 11 0.1352604730251971 12 0.12366671819446591 13 0.11980213325088886 14 0.10820837842015767 15 0.13139588808162003 16 0.10820837842015767 17 0.1159375483073118 18 0.11207296336373475 19 0.09275003864584944 20 0.08888545370227237 21 0.10047920853300356 22 0.11207296336373475 23 0.09275003864584944 24 0.08502086875869531 25 0.08888545370227237 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 25876.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.644767351986395 #Duplication Level Percentage of deduplicated Percentage of total 1 61.34001484780994 25.544906477044364 2 15.358203414996288 12.791776163240067 3 8.092056421677803 10.109754212397588 4 3.78619153674833 6.307002627917761 5 2.830363771343727 5.893492038955016 6 1.8466963622865626 4.6143144226310095 7 1.3734224201930216 4.0037100015458345 8 1.1321455085374907 3.77183490493121 9 0.7887899034892353 2.9564074818364507 >10 3.3964365256124722 22.302519709383212 >50 0.05567928730512249 1.7042819601174832 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATAATGGAGGCTGACCAGAGCAG 95 0.3671355696398207 No Hit GTATCAACGCAGAGTACTTTTTTTT 91 0.3516772298655125 No Hit GTGTAGCCCTGGCTGTCCTGGAACT 81 0.3130313804297419 No Hit CTATAATACCTTGGAATACTGCCTG 60 0.2318750966146236 No Hit CTGTAGACCAGGCTGGCCTCGAACT 58 0.2241459267274695 No Hit GCTGAAGGGAGCATCAAAGAAATCA 56 0.21641675684031533 No Hit GTATCAACGCAGAGTACATGGGGAG 50 0.19322924717885298 No Hit TATCAACGCAGAGTACTTTTTTTTT 50 0.19322924717885298 No Hit CTCCAGGAAAGAGTGGTTGCACATG 49 0.18936466223527593 No Hit CGGTAGAACATGGCGCAGGGACAAC 47 0.18163549234812182 No Hit CCTAAATAGAATCTAAGTGGCATTT 43 0.16617715257381357 No Hit ACACTGGAGCATCCCCAAGTGGCTC 42 0.1623125676302365 No Hit GTTGTAGAGAATAGTTTGAAAATGA 42 0.1623125676302365 No Hit GTACATGGGTTGCGGTAGAACATGG 41 0.15844798268665944 No Hit CCCTTCAGCAGTGCAAGCCTCTTAG 40 0.15458339774308238 No Hit ATACTAGCCTAACCTTTTTGTTTTT 39 0.15071881279950533 No Hit GTTTAGGAGATTGTAAAGGGAGGTT 38 0.14685422785592828 No Hit GATTAAAAGCGTGCGCCACCATCGC 37 0.1429896429123512 No Hit GTATTGGAATTAGTGAAATTGGAGT 35 0.1352604730251971 No Hit CTCCAGAGGCATCGTGGGGATGCCA 33 0.12753130313804295 No Hit GGTATCAACGCAGAGTACTTTTTTT 32 0.12366671819446591 No Hit GTATCAACGCAGAGTACATGGGTTG 32 0.12366671819446591 No Hit GCTATGGAGTGCCAATTGAGACTTC 31 0.11980213325088886 No Hit GTAGAACATGGCGCAGGGACAACGC 31 0.11980213325088886 No Hit ATTCTGCATTGCTCAAAACATAGAA 30 0.1159375483073118 No Hit GTAGAGAATAGTTTGAAAATGAGGT 30 0.1159375483073118 No Hit GGGTTTCTCTGTGTAGCCCTGGCTG 30 0.1159375483073118 No Hit ATCCTGAAGGCACTGGGACTTTGCT 30 0.1159375483073118 No Hit GTGCTATGGAGTGCCAATTGAGACT 30 0.1159375483073118 No Hit TTCCTGGAGTCCTCTAGTGACAAAT 29 0.11207296336373475 No Hit GCCTAACACTTCCATCTTCCCTGTT 29 0.11207296336373475 No Hit GCTTTATTGGGTAACACTGGAGCAT 28 0.10820837842015767 No Hit GTACATGGGACTGTGCCTGCAACCT 28 0.10820837842015767 No Hit GTACATGGGAACGCCGCCTTGTCGA 28 0.10820837842015767 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 28 0.10820837842015767 No Hit GCATAAGACATGCTGTGATACACCA 28 0.10820837842015767 No Hit CCCCACAGGCTGGCTGGACTTGGAA 27 0.10434379347658061 No Hit CATTTACACCTACTACCCAACTATC 26 0.10047920853300356 No Hit TATTTAAACAGTTTGAAAAAGGAAA 26 0.10047920853300356 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 26 0.10047920853300356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 55 1.8403183E-4 13.822418 1 TATCAAC 65 7.544491E-4 11.695893 2 TCAACGC 70 0.0014034456 10.860471 4 ATCAACG 70 0.0014034456 10.860471 3 CAACGCA 70 0.0014034456 10.860471 5 AACGCAG 75 0.002493311 10.13644 6 >>END_MODULE