##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061980_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1004770 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.72347303362959 32.0 32.0 32.0 32.0 32.0 2 31.393011335927625 32.0 32.0 32.0 32.0 32.0 3 31.532359644495756 32.0 32.0 32.0 32.0 32.0 4 31.63214666042975 32.0 32.0 32.0 32.0 32.0 5 31.588012181892374 32.0 32.0 32.0 32.0 32.0 6 35.23374005991421 36.0 36.0 36.0 36.0 36.0 7 35.24879226091544 36.0 36.0 36.0 36.0 36.0 8 35.20541118863024 36.0 36.0 36.0 36.0 36.0 9 35.281839624988805 36.0 36.0 36.0 36.0 36.0 10 35.1792917782179 36.0 36.0 36.0 36.0 36.0 11 35.30830737382684 36.0 36.0 36.0 36.0 36.0 12 35.23467957841098 36.0 36.0 36.0 36.0 36.0 13 35.265389094021515 36.0 36.0 36.0 36.0 36.0 14 35.22383630084497 36.0 36.0 36.0 36.0 36.0 15 35.21686754182549 36.0 36.0 36.0 36.0 36.0 16 35.22413587189108 36.0 36.0 36.0 36.0 36.0 17 35.20225424724066 36.0 36.0 36.0 36.0 36.0 18 35.193025269464655 36.0 36.0 36.0 36.0 36.0 19 35.17597659165779 36.0 36.0 36.0 36.0 36.0 20 35.15773361067707 36.0 36.0 36.0 36.0 36.0 21 35.138016660529274 36.0 36.0 36.0 36.0 36.0 22 35.1260188898952 36.0 36.0 36.0 36.0 36.0 23 35.098607641549805 36.0 36.0 36.0 36.0 36.0 24 35.08657702757845 36.0 36.0 36.0 36.0 36.0 25 35.07231207141933 36.0 36.0 36.0 36.0 36.0 26 35.03089264209719 36.0 36.0 36.0 36.0 36.0 27 35.012633737074154 36.0 36.0 36.0 36.0 36.0 28 34.9865780228311 36.0 36.0 36.0 36.0 36.0 29 34.96178727469968 36.0 36.0 36.0 36.0 36.0 30 34.926839973327226 36.0 36.0 36.0 36.0 36.0 31 34.91114981538063 36.0 36.0 36.0 36.0 36.0 32 34.883714680971764 36.0 36.0 36.0 36.0 36.0 33 34.86066861072683 36.0 36.0 36.0 32.0 36.0 34 34.84337111975875 36.0 36.0 36.0 32.0 36.0 35 34.82448122455885 36.0 36.0 36.0 32.0 36.0 36 34.7871323785543 36.0 36.0 36.0 32.0 36.0 37 34.74346268300208 36.0 36.0 36.0 32.0 36.0 38 34.733574847975156 36.0 36.0 36.0 32.0 36.0 39 34.66950545896076 36.0 36.0 36.0 32.0 36.0 40 34.66264418722693 36.0 36.0 36.0 32.0 36.0 41 34.602261214009175 36.0 36.0 36.0 32.0 36.0 42 34.58253928759816 36.0 36.0 36.0 32.0 36.0 43 34.54735213033829 36.0 36.0 36.0 32.0 36.0 44 34.45604367168606 36.0 36.0 36.0 32.0 36.0 45 34.418765488619286 36.0 36.0 36.0 32.0 36.0 46 34.30938423718861 36.0 36.0 36.0 32.0 36.0 47 34.25287777302268 36.0 36.0 36.0 32.0 36.0 48 34.205039959393694 36.0 36.0 36.0 32.0 36.0 49 34.138991012868615 36.0 36.0 36.0 32.0 36.0 50 33.74585029409716 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 3.0 20 16.0 21 20.0 22 78.0 23 266.0 24 647.0 25 1360.0 26 2954.0 27 5458.0 28 9378.0 29 14798.0 30 21556.0 31 31715.0 32 47982.0 33 77964.0 34 166570.0 35 624002.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.983975660844706 20.522523275910128 13.83184399366035 22.661657069584816 2 14.412501816430082 21.730674676874507 41.00444104713959 22.852382459555816 3 18.059808891016523 27.926773072762145 29.43707347076486 24.576344565456466 4 10.802671258098869 17.536252077589896 38.01039043761259 33.650686226698646 5 11.977467480119829 40.52250763856405 32.61492679916797 14.885098082148154 6 29.856215707291923 38.39569094986012 18.736445889552723 13.011647453295236 7 28.133105088726772 33.921992097694 19.812892502761827 18.1320103108174 8 28.171123739761338 33.576241328861336 18.755934193895122 19.496700737482207 9 28.459946057306645 14.897737790738178 20.052748390178845 36.58956776177632 10 16.09792897671007 29.17207835830922 30.718304406286418 24.011688258694285 11 34.168914278889694 24.32696039889726 22.22229963076127 19.281825691451775 12 24.660071459139903 27.431153398290153 28.938563054231313 18.970212088338627 13 28.576490142022553 22.908128228350765 26.274172198612618 22.241209431014063 14 23.065079570448958 21.976273176945966 27.96202115907123 26.996626093533845 15 24.55268369875693 29.188470993361666 24.752032803527175 21.50681250435423 16 23.005899892910175 29.036967884995878 25.796405922186704 22.16072629990724 17 20.612876578719508 28.580073051544137 26.890631686853705 23.91641868288265 18 20.718174308548225 28.029001662071916 29.52068632622391 21.732137703155946 19 23.74772335957483 26.0874628024324 29.454800601132597 20.710013236860178 20 26.01834453326539 25.46558011401637 28.18959202522373 20.326483327494508 21 26.736666102690165 24.795027717786162 26.935318530608992 21.532987648914677 22 24.713616051434656 26.960000796202117 27.287837017426874 21.038546134936354 23 23.15325895478567 27.25469510435224 27.856822954507 21.735222986355083 24 22.6331980775566 26.917093881840792 28.31264686299157 22.137061177611038 25 22.556373766256257 26.990138012096338 28.815138236028847 21.638349985618557 26 21.515194039625026 27.220485504628428 29.027567530447296 22.236752925299246 27 22.131377591643044 27.907835440619127 28.284539316538744 21.67624765119908 28 21.500166707306757 27.39523565446303 28.37617130544262 22.728426332787595 29 21.80806277282472 27.23887950030156 28.58108256051658 22.371975166357142 30 22.499348101731957 27.01207653982352 28.695267915259198 21.793307443185324 31 22.553885627215063 26.94415720261513 28.389965036670194 22.11199213349961 32 21.56900213582068 27.722076583005396 28.640598905615832 22.06832237555809 33 21.788689738636442 27.433967409424454 28.99900375111095 21.778339100828152 34 21.742475362422695 27.465698481039368 29.271193491817993 21.520632664719944 35 22.479671964728247 27.64911372751973 28.337928083043877 21.533286224708142 36 21.81406870633947 27.508511906716866 28.632650887915528 22.044768499028137 37 22.293870352603022 27.380080337912887 27.569479555235297 22.756569754248794 38 21.700787244842104 27.684843297471062 28.59798759915205 22.01638185853479 39 22.098180073768418 27.654598185050048 28.148743090431005 22.098478650750522 40 22.965500493646292 27.168162202617918 28.658356954043125 21.207980349692665 41 22.908486877004826 27.242941867883275 28.303092371036755 21.545478884075152 42 21.927359010751232 28.10946709637094 28.171275238324633 21.7918986545532 43 21.637987405609252 27.97250612849384 28.53295353093807 21.856552934958838 44 21.726143969742964 27.792281470053993 28.33641046057379 22.145164099629252 45 22.49526996294597 27.87820639781677 27.828940362219818 21.797583277017445 46 22.78964036681908 27.577417576183432 27.31944192860683 22.313500128390658 47 22.58498580749953 27.95663822858485 27.278264573687544 22.180111390228074 48 22.04642200611303 28.00110277395423 27.605875754798014 22.346599465134727 49 22.58177851473934 27.558259664824043 27.258277381096935 22.60168443933968 50 22.34208572446589 28.409043407640077 26.7958127063938 22.453058161500227 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 54.0 2 57.0 3 140.5 4 224.0 5 259.5 6 295.0 7 272.0 8 249.0 9 381.0 10 513.0 11 814.0 12 1115.0 13 2210.5 14 3306.0 15 4621.5 16 5937.0 17 6369.5 18 6802.0 19 6579.5 20 6357.0 21 6850.0 22 7343.0 23 7279.5 24 7216.0 25 8812.5 26 10409.0 27 13519.0 28 16629.0 29 20532.0 30 24435.0 31 27428.0 32 30421.0 33 36215.5 34 42010.0 35 47841.5 36 53673.0 37 59261.0 38 64849.0 39 66304.0 40 67759.0 41 69743.0 42 71727.0 43 71126.5 44 70526.0 45 71478.5 46 72431.0 47 72960.0 48 73489.0 49 70993.5 50 68498.0 51 66415.0 52 64332.0 53 59843.5 54 55355.0 55 51011.0 56 46667.0 57 41534.5 58 36402.0 59 31369.5 60 26337.0 61 23142.5 62 19948.0 63 16494.0 64 13040.0 65 11898.5 66 10757.0 67 9436.0 68 8115.0 69 7099.5 70 6084.0 71 5303.0 72 4522.0 73 3784.5 74 3047.0 75 2365.0 76 1683.0 77 1300.5 78 918.0 79 799.5 80 681.0 81 456.5 82 232.0 83 188.5 84 145.0 85 124.0 86 103.0 87 70.5 88 38.0 89 26.0 90 14.0 91 12.5 92 11.0 93 6.0 94 1.0 95 4.0 96 7.0 97 6.5 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029658528817540334 2 0.005175313753396299 3 2.9857579346517115E-4 4 0.0 5 0.0 6 9.952526448839038E-5 7 0.0 8 0.0 9 0.0 10 9.952526448839038E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.971515869303423E-4 17 0.0 18 0.0 19 0.0 20 1.9905052897678077E-4 21 0.0 22 0.0 23 0.0 24 6.966768514187326E-4 25 2.9857579346517115E-4 26 9.952526448839038E-5 27 1.9905052897678077E-4 28 0.0014928789673258557 29 3.9810105795356153E-4 30 0.0011943031738606846 31 2.9857579346517115E-4 32 3.9810105795356153E-4 33 9.952526448839038E-5 34 3.9810105795356153E-4 35 0.0 36 9.952526448839038E-5 37 0.0013933537028374653 38 0.0 39 3.9810105795356153E-4 40 1.9905052897678077E-4 41 6.966768514187326E-4 42 0.004777212695442738 43 0.003682434786070444 44 0.004478636901977567 45 0.002090030554256198 46 0.002388606347721369 47 0.0013933537028374653 48 0.0030852831991401014 49 0.004379111637489177 50 0.0015924042318142461 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1004770.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.83215211085879 #Duplication Level Percentage of deduplicated Percentage of total 1 63.81885926361277 26.058613689933267 2 14.940814162138519 12.201311930570267 3 7.0794266538797865 8.672046779666626 4 4.077950477034517 6.660459767152904 5 2.534909892165382 5.1752913152108775 6 1.7292031204607963 4.236425090713614 7 1.2037484322559089 3.4406147362356747 8 0.8973878750021529 2.9313822571622596 9 0.6161343273984917 2.2642281519351193 >10 2.921386111052436 19.64475855178027 >50 0.11621808696930626 3.205797434170505 >100 0.06127618747172861 4.628272975128573 >500 0.001953025860496299 0.47399176756641687 >1k 7.323846976861121E-4 0.40680555277361663 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1736 0.17277585915184568 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 1260 0.12540183325537188 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1085 0.10798491196990355 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 9.952526448839038E-5 0.0 15 0.0 0.0 0.0 1.9905052897678077E-4 0.0 16 0.0 0.0 0.0 2.9857579346517115E-4 0.0 17 0.0 0.0 0.0 3.9810105795356153E-4 0.0 18 0.0 0.0 0.0 3.9810105795356153E-4 0.0 19 0.0 0.0 0.0 4.976263224419519E-4 0.0 20 0.0 0.0 0.0 6.966768514187326E-4 0.0 21 0.0 0.0 0.0 7.962021159071231E-4 0.0 22 0.0 0.0 0.0 0.0011943031738606846 0.0 23 0.0 0.0 0.0 0.0015924042318142461 0.0 24 0.0 0.0 0.0 0.0024881316122097596 0.0 25 0.0 0.0 0.0 0.0032843337281168823 0.0 26 0.0 0.0 0.0 0.004279586373000787 0.0 27 0.0 0.0 0.0 0.005075788488907909 0.0 28 0.0 0.0 0.0 0.0064691421917453746 0.0 29 0.0 0.0 0.0 0.00776297063009445 0.0 30 0.0 0.0 0.0 0.011544930680653284 0.0 31 0.0 0.0 0.0 0.020203628691143248 0.0 32 0.0 0.0 0.0 0.030554256197935847 0.0 33 0.0 0.0 0.0 0.040606307911263274 0.0 34 0.0 0.0 0.0 0.05016073330214875 0.0 35 9.952526448839038E-5 0.0 0.0 0.06688097773619833 0.0 36 9.952526448839038E-5 0.0 0.0 0.08947321277506295 0.0 37 9.952526448839038E-5 0.0 0.0 0.11445405416164893 0.0 38 9.952526448839038E-5 0.0 0.0 0.14719786617832936 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATTCG 30 0.0057449704 29.332903 10 GTATCAA 5325 0.0 26.322222 1 GGTATCA 1965 0.0 26.315285 1 TATACCG 45 0.0013981697 24.444084 5 GTATTAG 270 0.0 22.004059 1 GTACCGT 70 3.2150227E-5 21.999676 6 TACCGTG 95 6.8649024E-7 20.841799 7 CTATTAC 130 1.6189006E-9 20.311436 1 TTTCGCG 55 0.0044834763 19.999704 25 CGATATT 55 0.0044834763 19.999704 27 GATATAC 190 0.0 19.68784 1 GGTCGCG 80 8.987661E-5 19.249718 7 GCGGTAT 265 0.0 19.095959 44 TATCAAC 7640 0.0 18.977106 2 CGTCTTA 320 0.0 18.562227 15 ATACTGC 155 7.203198E-10 18.451342 6 TACGCCG 60 0.0074118813 18.333065 16 CTATACT 180 1.4551915E-11 18.333063 4 CGCTCTA 85 1.430689E-4 18.11738 15 TTCGACT 85 1.430689E-4 18.11738 22 >>END_MODULE