##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061979_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1743046 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.280726957292003 32.0 32.0 32.0 32.0 32.0 2 31.459552989421965 32.0 32.0 32.0 32.0 32.0 3 31.578094898241353 32.0 32.0 32.0 32.0 32.0 4 31.658753125276096 32.0 32.0 32.0 32.0 32.0 5 31.629667834354343 32.0 32.0 32.0 32.0 32.0 6 35.281877816190736 36.0 36.0 36.0 36.0 36.0 7 35.28529080701255 36.0 36.0 36.0 36.0 36.0 8 35.23475398813342 36.0 36.0 36.0 36.0 36.0 9 35.31156492714478 36.0 36.0 36.0 36.0 36.0 10 35.2032918236237 36.0 36.0 36.0 36.0 36.0 11 35.31712702934977 36.0 36.0 36.0 36.0 36.0 12 35.24378415715936 36.0 36.0 36.0 36.0 36.0 13 35.27692097626798 36.0 36.0 36.0 36.0 36.0 14 35.23810673958117 36.0 36.0 36.0 36.0 36.0 15 35.21864712692608 36.0 36.0 36.0 36.0 36.0 16 35.2276319729944 36.0 36.0 36.0 36.0 36.0 17 35.20822456779683 36.0 36.0 36.0 36.0 36.0 18 35.20741908130939 36.0 36.0 36.0 36.0 36.0 19 35.198609216280005 36.0 36.0 36.0 36.0 36.0 20 35.20105837711684 36.0 36.0 36.0 36.0 36.0 21 35.19257093616577 36.0 36.0 36.0 36.0 36.0 22 35.17445265357311 36.0 36.0 36.0 36.0 36.0 23 35.14887731018 36.0 36.0 36.0 36.0 36.0 24 35.129722910353486 36.0 36.0 36.0 36.0 36.0 25 35.115367580660525 36.0 36.0 36.0 36.0 36.0 26 35.07026492703004 36.0 36.0 36.0 36.0 36.0 27 35.06379636567251 36.0 36.0 36.0 36.0 36.0 28 35.04351061303029 36.0 36.0 36.0 36.0 36.0 29 35.0256596785168 36.0 36.0 36.0 36.0 36.0 30 35.005280411417715 36.0 36.0 36.0 36.0 36.0 31 35.01086316712238 36.0 36.0 36.0 36.0 36.0 32 34.989988216031016 36.0 36.0 36.0 36.0 36.0 33 34.9652384389167 36.0 36.0 36.0 36.0 36.0 34 34.95397883934216 36.0 36.0 36.0 36.0 36.0 35 34.94845173334496 36.0 36.0 36.0 36.0 36.0 36 34.924862568170894 36.0 36.0 36.0 36.0 36.0 37 34.90818371976414 36.0 36.0 36.0 36.0 36.0 38 34.89425350793955 36.0 36.0 36.0 32.0 36.0 39 34.87424370900137 36.0 36.0 36.0 32.0 36.0 40 34.86043053367496 36.0 36.0 36.0 32.0 36.0 41 34.83917750879782 36.0 36.0 36.0 32.0 36.0 42 34.8061582998957 36.0 36.0 36.0 32.0 36.0 43 34.8093710665123 36.0 36.0 36.0 32.0 36.0 44 34.76483466299799 36.0 36.0 36.0 32.0 36.0 45 34.750938299964545 36.0 36.0 36.0 32.0 36.0 46 34.72686148271474 36.0 36.0 36.0 32.0 36.0 47 34.69513713350078 36.0 36.0 36.0 32.0 36.0 48 34.67781515806238 36.0 36.0 36.0 32.0 36.0 49 34.66393199032039 36.0 36.0 36.0 32.0 36.0 50 34.26429250863144 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 22.0 21 50.0 22 148.0 23 316.0 24 880.0 25 1929.0 26 4069.0 27 7580.0 28 13108.0 29 21049.0 30 31043.0 31 46308.0 32 70067.0 33 120105.0 34 277924.0 35 1148447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.19615263432464 17.539954052910893 12.182635948805094 26.08125736395937 2 16.360206475509862 19.540473227548198 36.90012490196315 27.199195394978794 3 18.78575292922304 23.054160004451994 28.27429564111876 29.885791425206204 4 12.988018094770931 15.61359574767146 34.62280090301742 36.77558525454019 5 14.957321837748403 36.300189438488715 32.883526883398375 15.858961840364511 6 35.58852856098705 34.38236141183058 16.11865921762069 13.910450809561675 7 31.27014433354025 29.783780806702747 19.78037297925585 19.165701880501146 8 28.60819507918896 32.93183312431226 18.636054355421486 19.82391744107729 9 27.228311817358808 14.27036349012017 18.22929515342682 40.272029539094206 10 16.635992394922454 26.517946170095342 30.61588736040242 26.230174074579786 11 37.531998581793026 21.05767719268453 21.692428082792993 19.71789614272945 12 24.90829272434577 23.108225485730152 28.27567373437075 23.707808055553325 13 29.762152002873133 19.194788892547873 24.85166771272818 26.191391391850814 14 23.849686124175726 19.038568115815647 24.625798745414638 32.48594701459399 15 25.436333866117128 26.822068952856092 21.79380234371325 25.94779483731353 16 26.1042526996031 25.57861751405882 23.160936619710228 25.156193166627844 17 24.480421056013437 25.873901205131705 24.63629760775103 25.009380131103825 18 25.169158287637362 24.94523941477027 25.510572894973272 24.3750294026191 19 25.990822961643005 24.723157048064138 24.93221636147296 24.353803628819893 20 26.127353140456087 24.209041314528672 24.51282039513655 25.15078514987869 21 26.74152030411131 24.025240871439994 24.34393584564033 24.889302978808363 22 26.390927147074716 23.831556941124905 24.68580863614615 25.09170727565423 23 24.967399005762903 24.041203755496845 25.23245240369583 25.758944835044417 24 25.231479755023596 24.42386081668364 24.972160468151632 25.372498960141133 25 25.44846831175805 24.017465996268598 24.99133699436159 25.542728697611768 26 24.95235330497671 24.92464306572777 25.191246547694313 24.931757081601205 27 25.541338385040856 24.493055527666876 24.645891863702573 25.31971422358969 28 25.243672042588177 24.29973511476352 25.063180607899284 25.393412234749018 29 25.09704298576856 24.525570812407274 25.08086437389346 25.296521827930707 30 25.085813062632777 24.6035502483315 25.241920261980123 25.068716427055598 31 25.628584968118957 24.25650099079655 24.64255020819923 25.472363832885264 32 25.517227926808417 24.36567793547143 24.426319044521016 25.690775093199132 33 25.012851081211952 24.40179364376344 24.898568251862834 25.686787023161777 34 25.753531069799834 24.339037777383826 24.925775676452517 24.98165547636382 35 25.880513698728375 24.269826653930334 25.135323528652442 24.714336118688845 36 25.036258490912427 24.828747475674685 24.748083807600512 25.386910225812375 37 25.82525296742247 24.42979418948016 24.70127841992965 25.04367442316773 38 25.361694413113593 24.338944583218115 24.845643775322053 25.45371722834624 39 25.839486411593604 24.197059144134066 24.464065449246426 25.4993889950259 40 26.01585157009716 24.32346841303581 24.768551586447852 24.89212843041918 41 25.10011336619576 24.773669209374052 25.049741139536806 25.076476284893378 42 25.984379365799725 24.741257786363473 24.696735593829086 24.577627254007712 43 25.59205351359384 24.066544307697427 24.856235860969765 25.485166317738972 44 25.169151223172896 24.57436084561555 24.656060613884257 25.600427317327295 45 25.30421651839757 24.71919137212694 24.649197189676205 25.32739491979929 46 25.257473191290636 24.517311274775576 24.77049587578177 25.45471965815202 47 25.445491159022843 24.561852417069225 24.921515530516 25.07114089339193 48 25.919075144508668 24.940747859263617 24.06024182790918 25.079935168318535 49 25.471634245218826 24.929632090291236 24.182177440730886 25.416556223759052 50 25.425066838016775 25.10722768528187 24.271781161432457 25.195924315268904 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 381.0 1 223.5 2 66.0 3 202.5 4 339.0 5 338.0 6 337.0 7 260.0 8 183.0 9 252.5 10 322.0 11 561.0 12 800.0 13 1544.0 14 2288.0 15 2827.0 16 3366.0 17 3225.0 18 3084.0 19 2876.5 20 2669.0 21 3062.5 22 3456.0 23 4108.5 24 4761.0 25 6157.0 26 7553.0 27 9635.5 28 11718.0 29 14030.0 30 16342.0 31 19313.0 32 22284.0 33 26488.0 34 30692.0 35 35998.5 36 41305.0 37 48551.5 38 55798.0 39 62824.0 40 69850.0 41 77015.5 42 84181.0 43 89232.0 44 94283.0 45 103856.0 46 113429.0 47 121198.5 48 128968.0 49 134379.0 50 139790.0 51 138908.0 52 138026.0 53 137647.5 54 137269.0 55 136792.0 56 136315.0 57 131272.5 58 126230.0 59 117022.5 60 107815.0 61 94204.5 62 80594.0 63 69495.0 64 58396.0 65 49179.0 66 39962.0 67 33948.0 68 27934.0 69 24068.0 70 20202.0 71 15902.5 72 11603.0 73 10050.5 74 8498.0 75 6394.5 76 4291.0 77 3633.5 78 2976.0 79 2550.5 80 2125.0 81 1639.5 82 1154.0 83 967.5 84 781.0 85 590.0 86 399.0 87 259.0 88 119.0 89 80.5 90 42.0 91 30.5 92 19.0 93 17.5 94 16.0 95 16.0 96 16.0 97 13.5 98 11.0 99 9.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03482409529065785 2 0.0045322957627050575 3 4.015958270751317E-4 4 5.737083243930452E-5 5 0.0 6 2.2948332975721808E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.884499892716543E-4 17 0.0 18 2.2948332975721808E-4 19 0.0 20 1.7211249731791358E-4 21 0.0 22 0.0 23 5.737083243930452E-5 24 0.0012047874812253952 25 1.1474166487860904E-4 26 4.5896665951443617E-4 27 2.8685416219652267E-4 28 0.0015490124758612224 29 2.2948332975721808E-4 30 7.458208217109588E-4 31 2.2948332975721808E-4 32 2.2948332975721808E-4 33 1.1474166487860904E-4 34 0.001090045816346786 35 5.737083243930452E-5 36 3.4422499463582717E-4 37 0.0020079791353756586 38 0.0 39 9.179333190288723E-4 40 5.737083243930452E-5 41 0.0012621583136646995 42 0.00545022908173393 43 0.004991262422219494 44 0.0045322957627050575 45 0.002524316627329399 46 0.002811170789525922 47 0.0014916416434219177 48 0.0040733291031906215 49 0.0036717332761154894 50 0.0014916416434219177 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1743046.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.109782205584594 #Duplication Level Percentage of deduplicated Percentage of total 1 71.68440674736176 36.63774416394199 2 15.646760476452586 15.994050403488815 3 5.478732233827145 8.400504337008643 4 2.385960805995758 4.877837485820171 5 1.2852936719552108 3.284553982192346 6 0.7837593055053145 2.4034660443586113 7 0.5066585138287413 1.8126644406074495 8 0.38181842872992694 1.561172538757207 9 0.28803153504780565 1.3249106122170198 >10 1.4199726064675837 12.669450968614079 >50 0.08000412683905696 2.834358027171505 >100 0.05181417785861845 5.3787505243017435 >500 0.0055430189400012065 1.9892460199887747 >1k 0.0012443511906125157 0.831290451531669 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.737083243930453E-5 2 0.0 0.0 0.0 0.0 5.737083243930453E-5 3 0.0 0.0 0.0 0.0 5.737083243930453E-5 4 0.0 0.0 0.0 0.0 5.737083243930453E-5 5 0.0 0.0 0.0 0.0 5.737083243930453E-5 6 0.0 0.0 0.0 0.0 5.737083243930453E-5 7 0.0 0.0 0.0 5.737083243930453E-5 5.737083243930453E-5 8 0.0 0.0 0.0 5.737083243930453E-5 5.737083243930453E-5 9 0.0 0.0 0.0 5.737083243930453E-5 5.737083243930453E-5 10 0.0 0.0 0.0 1.1474166487860906E-4 5.737083243930453E-5 11 0.0 0.0 0.0 1.1474166487860906E-4 5.737083243930453E-5 12 0.0 0.0 0.0 1.1474166487860906E-4 1.1474166487860906E-4 13 0.0 0.0 0.0 1.1474166487860906E-4 1.7211249731791358E-4 14 0.0 0.0 0.0 1.1474166487860906E-4 1.7211249731791358E-4 15 0.0 0.0 0.0 1.1474166487860906E-4 2.868541621965226E-4 16 0.0 0.0 0.0 1.7211249731791358E-4 3.4422499463582717E-4 17 0.0 0.0 0.0 1.7211249731791358E-4 3.4422499463582717E-4 18 0.0 0.0 0.0 2.294833297572181E-4 4.0159582707513167E-4 19 0.0 0.0 0.0 3.4422499463582717E-4 4.0159582707513167E-4 20 0.0 0.0 0.0 4.0159582707513167E-4 4.0159582707513167E-4 21 0.0 0.0 0.0 4.0159582707513167E-4 4.0159582707513167E-4 22 0.0 0.0 0.0 5.737083243930452E-4 4.0159582707513167E-4 23 0.0 0.0 0.0 6.884499892716543E-4 4.589666595144362E-4 24 0.0 0.0 0.0 0.0010326749839074814 4.589666595144362E-4 25 0.0 0.0 0.0 0.0013768999785433087 4.589666595144362E-4 26 0.0 0.0 0.0 0.001721124973179136 4.589666595144362E-4 27 0.0 0.0 0.0 0.002065349967814963 4.589666595144362E-4 28 0.0 0.0 0.0 0.0023522041300114856 4.589666595144362E-4 29 0.0 0.0 0.0 0.003499620778797576 4.589666595144362E-4 30 0.0 0.0 0.0 0.005564970746612539 4.589666595144362E-4 31 0.0 0.0 0.0 0.009580929017363855 4.589666595144362E-4 32 0.0 0.0 0.0 0.014916416434219178 5.737083243930452E-4 33 0.0 0.0 0.0 0.01939134136448493 5.737083243930452E-4 34 0.0 0.0 0.0 0.02380889546231138 6.310791568323498E-4 35 0.0 0.0 0.0 0.02937386620892392 6.310791568323498E-4 36 0.0 0.0 0.0 0.03740578275042655 6.310791568323498E-4 37 0.0 0.0 0.0 0.04933891589780189 6.310791568323498E-4 38 0.0 0.0 0.0 0.06482904065641412 6.310791568323498E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 945 0.0 30.273235 1 GTATCAA 2230 0.0 24.572073 1 GTATACG 60 2.867913E-4 22.006311 1 TAAGCGT 85 6.1175015E-6 20.705288 4 TTAACGG 95 1.5981645E-5 18.525785 35 ATGCGTA 60 0.00741461 18.332808 27 ATTACAC 290 0.0 17.447775 3 GTATAGG 170 2.4610927E-9 16.828358 1 TGAACCG 105 3.7768143E-5 16.761425 5 TCAACGC 3230 0.0 16.754936 4 TACACTA 145 1.2505552E-7 16.689177 5 GTCCTAC 495 0.0 16.449163 1 ATCAACG 3285 0.0 16.407444 3 GTATATA 255 0.0 16.39686 1 CAACGCA 3340 0.0 16.334862 5 TATCAAC 3400 0.0 16.176933 2 TAACGGC 110 5.6221514E-5 16.00046 36 GTATAAG 320 0.0 15.817038 1 AACGCAG 3455 0.0 15.663805 6 GCCTAAC 85 0.0029749528 15.533869 1 >>END_MODULE