##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061977_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3257925 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.161128325544635 32.0 32.0 32.0 32.0 32.0 2 31.183175180521346 32.0 32.0 32.0 32.0 32.0 3 31.42051152190428 32.0 32.0 32.0 32.0 32.0 4 31.546091760860058 32.0 32.0 32.0 32.0 32.0 5 31.477419523162748 32.0 32.0 32.0 32.0 32.0 6 35.10642418103547 36.0 36.0 36.0 36.0 36.0 7 35.11176070658471 36.0 36.0 36.0 36.0 36.0 8 35.04357988597037 36.0 36.0 36.0 36.0 36.0 9 35.18023864883323 36.0 36.0 36.0 36.0 36.0 10 35.00166455642779 36.0 36.0 36.0 36.0 36.0 11 35.18329580944926 36.0 36.0 36.0 36.0 36.0 12 35.07844103225212 36.0 36.0 36.0 36.0 36.0 13 35.13994490358127 36.0 36.0 36.0 36.0 36.0 14 35.08813708111758 36.0 36.0 36.0 36.0 36.0 15 35.04699156671808 36.0 36.0 36.0 36.0 36.0 16 35.06652332389481 36.0 36.0 36.0 36.0 36.0 17 35.0396577576218 36.0 36.0 36.0 36.0 36.0 18 35.039393478978184 36.0 36.0 36.0 36.0 36.0 19 35.03679826883676 36.0 36.0 36.0 36.0 36.0 20 35.03422976280915 36.0 36.0 36.0 36.0 36.0 21 35.02824313021325 36.0 36.0 36.0 36.0 36.0 22 35.00860394269358 36.0 36.0 36.0 36.0 36.0 23 34.97183329880215 36.0 36.0 36.0 32.0 36.0 24 34.951827927285 36.0 36.0 36.0 32.0 36.0 25 34.93403132361856 36.0 36.0 36.0 32.0 36.0 26 34.8867417144348 36.0 36.0 36.0 32.0 36.0 27 34.87233591933516 36.0 36.0 36.0 32.0 36.0 28 34.85305432138554 36.0 36.0 36.0 32.0 36.0 29 34.82204132998765 36.0 36.0 36.0 32.0 36.0 30 34.8007609137718 36.0 36.0 36.0 32.0 36.0 31 34.80800141194165 36.0 36.0 36.0 32.0 36.0 32 34.779103570524185 36.0 36.0 36.0 32.0 36.0 33 34.75694253244013 36.0 36.0 36.0 32.0 36.0 34 34.74563993953206 36.0 36.0 36.0 32.0 36.0 35 34.73784479384884 36.0 36.0 36.0 32.0 36.0 36 34.701970732905146 36.0 36.0 36.0 32.0 36.0 37 34.69289471059033 36.0 36.0 36.0 32.0 36.0 38 34.66848715056363 36.0 36.0 36.0 32.0 36.0 39 34.6480766131817 36.0 36.0 36.0 32.0 36.0 40 34.63844962667956 36.0 36.0 36.0 32.0 36.0 41 34.60802566050477 36.0 36.0 36.0 32.0 36.0 42 34.5761298986318 36.0 36.0 36.0 32.0 36.0 43 34.58258063030917 36.0 36.0 36.0 32.0 36.0 44 34.524015132331165 36.0 36.0 36.0 32.0 36.0 45 34.51074809886661 36.0 36.0 36.0 32.0 36.0 46 34.48939125363537 36.0 36.0 36.0 32.0 36.0 47 34.47648242362854 36.0 36.0 36.0 32.0 36.0 48 34.44393164360751 36.0 36.0 36.0 32.0 36.0 49 34.429695588449704 36.0 36.0 36.0 32.0 36.0 50 33.954148729636195 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 26.0 21 74.0 22 214.0 23 574.0 24 1434.0 25 3621.0 26 7488.0 27 14901.0 28 26599.0 29 44113.0 30 68702.0 31 106098.0 32 169460.0 33 299392.0 34 671169.0 35 1844055.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.58226313703251 18.61228134114144 12.85727751394937 25.948178007876677 2 16.259201051022476 20.01347543419138 36.678719864447565 27.048603650338578 3 18.269743720076786 23.63036929674805 28.415597426826057 29.684289556349107 4 12.89909988719814 16.475179753984513 35.15608861468573 35.46963174413162 5 15.238876044990612 36.269661293510836 32.61509476586931 15.876367895629242 6 34.958203419234714 35.03610583678799 16.357819493529924 13.647871250447372 7 30.918544779269013 29.92610327125394 20.305102173929725 18.85024977554732 8 28.44865980647191 32.81122186667895 18.792114612828716 19.948003714020427 9 27.03395566196275 14.49428700783474 18.81366207018271 39.6580952600198 10 17.10913186661064 26.37313796129495 30.187656483997007 26.33007368809741 11 36.99191970349226 21.26206097439321 21.949645863548117 19.796373458566418 12 24.60888448936056 23.615706316136805 28.117805044621964 23.657604149880676 13 29.319981276425942 19.44016513578428 25.03369475970134 26.206158828088434 14 23.89210924131157 19.55259866325959 24.584758703776178 31.970533391652662 15 25.35070635450478 27.26493089926871 21.601694329979974 25.782668416246533 16 26.203382547039507 25.610638755026244 23.336474416034868 24.84950428189938 17 24.427388598571177 26.050814552207306 24.68528281037777 24.83651403884374 18 25.204102492324864 24.9080855833872 25.619336497313316 24.268475426974618 19 25.75422262766105 24.979680311756812 24.939532045560302 24.326565015021835 20 26.13850317902415 24.186121320426114 24.3763655193286 25.299009981221136 21 26.987729920117864 24.191348787955526 24.044015746218836 24.776905545707777 22 26.343239945670945 24.20970402940522 24.607687408396448 24.83936861652739 23 24.685873580844735 24.365915226997316 25.205591045094977 25.74262014706298 24 25.12244113678415 24.74689154827723 24.964578322424437 25.16608899251418 25 25.152920029761393 24.425675094968803 24.96077242110898 25.460632454160827 26 24.94469615652484 25.29841975425357 25.138286466389044 24.618597622832546 27 25.546308662207164 24.68545027780071 24.62706930913705 25.141171750855072 28 24.98354754269044 24.48233079752673 25.322633915635727 25.2114877441471 29 24.920623909576328 24.700359862832222 25.208109007375285 25.170907220216165 30 24.911176982107705 24.76669665546614 25.374975098860208 24.947151263565942 31 25.617542769724906 24.452993205464114 24.53313656108575 25.396327463725232 32 25.478229400936737 24.53891352811916 24.238720428447376 25.744136642496724 33 24.902936446815556 24.52036070900517 24.924115623571748 25.652587220607526 34 25.63436647455904 24.518769168813247 25.09220674938672 24.754657607240993 35 25.953852165230522 24.291841330713666 25.12909306272313 24.625213441332676 36 24.777211668942662 24.903703690061704 24.791791554900332 25.5272930860953 37 25.95890932352078 24.62776269634006 24.511060607734876 24.902267372404285 38 25.00155773997253 24.382636187143657 24.95416561154723 25.66164046133659 39 25.790691449850637 24.507536738299546 24.248751039010312 25.4530207728395 40 25.861798537412618 24.612782676089843 24.805512711311646 24.719906075185893 41 24.90642716604919 25.1372821059029 25.09409464407945 24.862196083968456 42 26.103377463725185 24.9597424004764 24.618220439134745 24.31865969666367 43 25.603247853907966 24.160671278802575 24.786741408725323 25.44933945856414 44 25.047417186830927 24.772322298739788 24.60196114844902 25.57829936598026 45 25.34525816396816 25.00365271350571 24.45774086729538 25.193348255230745 46 25.069301776353935 24.806705520476218 24.657803774449 25.466188928720847 47 25.406760292055225 24.539968820185663 24.95886124614281 25.094409641616306 48 25.82357287324187 25.2072035403174 24.039539724358896 24.929683862081838 49 25.219734311335447 25.140263454026307 24.335885773151066 25.304116461487176 50 25.300258820524913 25.255566851327988 24.289317882681125 25.154856445465974 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 17.0 2 26.0 3 73.5 4 121.0 5 166.5 6 212.0 7 197.5 8 183.0 9 252.5 10 322.0 11 490.0 12 658.0 13 1350.5 14 2043.0 15 2634.5 16 3226.0 17 3593.5 18 3961.0 19 4268.0 20 4575.0 21 5888.5 22 7202.0 23 8848.0 24 10494.0 25 13996.0 26 17498.0 27 22722.5 28 27947.0 29 32675.5 30 37404.0 31 43764.5 32 50125.0 33 58683.0 34 67241.0 35 78236.0 36 89231.0 37 105854.5 38 122478.0 39 132676.5 40 142875.0 41 156217.5 42 169560.0 43 173668.0 44 177776.0 45 194708.5 46 211641.0 47 223836.0 48 236031.0 49 245364.5 50 254698.0 51 245939.5 52 237181.0 53 236287.0 54 235393.0 55 236057.5 56 236722.0 57 229639.5 58 222557.0 59 204722.0 60 186887.0 61 164848.5 62 142810.0 63 124628.5 64 106447.0 65 89604.5 66 72762.0 67 65444.5 68 58127.0 69 51910.0 70 45693.0 71 35739.0 72 25785.0 73 22636.5 74 19488.0 75 14920.5 76 10353.0 77 9061.0 78 7769.0 79 6573.5 80 5378.0 81 4201.5 82 3025.0 83 2549.5 84 2074.0 85 1588.5 86 1103.0 87 765.0 88 427.0 89 283.5 90 140.0 91 114.0 92 88.0 93 70.5 94 53.0 95 51.0 96 49.0 97 51.5 98 54.0 99 39.0 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029712163416898797 2 0.00445068563579579 3 9.208315108543014E-5 4 0.0 5 3.069438369514338E-5 6 9.208315108543014E-5 7 0.0 8 0.0 9 0.0 10 1.2277753478057352E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.673595923785846E-4 17 0.0 18 9.208315108543014E-5 19 3.069438369514338E-5 20 2.1486068586600365E-4 21 0.0 22 0.0 23 3.069438369514338E-5 24 0.0010129146619397315 25 3.9902698803686394E-4 26 4.297213717320073E-4 27 4.297213717320073E-4 28 0.0016268023358425993 29 5.218045228174374E-4 30 0.001289164115196022 31 3.9902698803686394E-4 32 6.752764412931544E-4 33 2.4555506956114705E-4 34 8.90137127159158E-4 35 1.2277753478057352E-4 36 3.6833260434172057E-4 37 0.0017495798706231728 38 0.0 39 5.218045228174374E-4 40 0.0 41 0.0010743034293300183 42 0.0047576294727472235 43 0.004389296868405504 44 0.004297213717320073 45 0.0022406900097454666 46 0.0022099956260503233 47 0.0014733304173668823 48 0.004235824949929787 49 0.0038981867292832094 50 0.0021179124749648934 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3257925.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.34159863201996 #Duplication Level Percentage of deduplicated Percentage of total 1 70.6124092460834 32.722919277219326 2 15.89180049085496 14.729028797746766 3 5.870882758610702 8.161982772455499 4 2.6719128946129116 4.952828597674808 5 1.4121038096495282 3.271957398676237 6 0.8378320236463862 2.329588521652433 7 0.5192647573514266 1.6844491278253135 8 0.3665171346130623 1.358799195519725 9 0.28246205431676774 1.1780768834931123 >10 1.3528188978908329 11.254327850858425 >50 0.09315125131685735 3.0046716822676665 >100 0.07234230847478501 6.932653792460468 >500 0.010380524686941076 3.3679058181123165 >1k 0.0061218478913531525 5.050810284037978 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3939 0.12090517737516977 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3855 0.11832684914477773 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3800 0.11663865804154486 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3773 0.11580990968177599 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3558 0.10921061718732014 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3427 0.10518965292325637 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.138876739028676E-5 2 0.0 0.0 0.0 0.0 6.138876739028676E-5 3 0.0 0.0 0.0 0.0 6.138876739028676E-5 4 0.0 0.0 0.0 0.0 6.138876739028676E-5 5 3.069438369514338E-5 0.0 0.0 0.0 6.138876739028676E-5 6 3.069438369514338E-5 0.0 0.0 0.0 6.138876739028676E-5 7 3.069438369514338E-5 0.0 0.0 0.0 6.138876739028676E-5 8 3.069438369514338E-5 0.0 0.0 0.0 6.138876739028676E-5 9 3.069438369514338E-5 0.0 0.0 3.069438369514338E-5 6.138876739028676E-5 10 3.069438369514338E-5 0.0 0.0 6.138876739028676E-5 6.138876739028676E-5 11 3.069438369514338E-5 0.0 0.0 1.2277753478057352E-4 6.138876739028676E-5 12 3.069438369514338E-5 0.0 0.0 1.2277753478057352E-4 1.5347191847571692E-4 13 3.069438369514338E-5 0.0 0.0 1.2277753478057352E-4 2.1486068586600368E-4 14 3.069438369514338E-5 0.0 0.0 1.5347191847571692E-4 2.1486068586600368E-4 15 3.069438369514338E-5 0.0 0.0 1.8416630217086029E-4 3.376382206465772E-4 16 3.069438369514338E-5 0.0 0.0 2.1486068586600368E-4 3.376382206465772E-4 17 3.069438369514338E-5 0.0 0.0 2.4555506956114705E-4 3.376382206465772E-4 18 3.069438369514338E-5 0.0 0.0 2.4555506956114705E-4 3.376382206465772E-4 19 3.069438369514338E-5 0.0 0.0 2.762494532562904E-4 3.376382206465772E-4 20 3.069438369514338E-5 0.0 0.0 3.9902698803686394E-4 3.9902698803686394E-4 21 3.069438369514338E-5 0.0 0.0 4.911101391222941E-4 4.911101391222941E-4 22 3.069438369514338E-5 0.0 0.0 6.138876739028677E-4 5.218045228174375E-4 23 3.069438369514338E-5 0.0 0.0 8.287483597688713E-4 5.218045228174375E-4 24 3.069438369514338E-5 0.0 0.0 0.0010129146619397315 5.218045228174375E-4 25 3.069438369514338E-5 0.0 0.0 0.0011970809641105918 5.218045228174375E-4 26 3.069438369514338E-5 0.0 0.0 0.0015040248010620256 5.524989065125808E-4 27 3.069438369514338E-5 0.0 0.0 0.001780274254318316 5.524989065125808E-4 28 3.069438369514338E-5 0.0 0.0 0.0022099956260503233 5.524989065125808E-4 29 3.069438369514338E-5 0.0 0.0 0.003222910287990055 5.524989065125808E-4 30 3.069438369514338E-5 0.0 0.0 0.004604157554271507 5.524989065125808E-4 31 3.069438369514338E-5 0.0 0.0 0.0062923486575043935 5.524989065125808E-4 32 3.069438369514338E-5 0.0 0.0 0.009239009492238158 5.524989065125808E-4 33 3.069438369514338E-5 0.0 0.0 0.011817337722630201 5.524989065125808E-4 34 3.069438369514338E-5 0.0 0.0 0.014794692941059109 5.524989065125808E-4 35 3.069438369514338E-5 0.0 0.0 0.018048297612744308 5.524989065125808E-4 36 3.069438369514338E-5 0.0 0.0 0.02222273379528381 5.524989065125808E-4 37 3.069438369514338E-5 0.0 0.0 0.02857647122017849 5.524989065125808E-4 38 3.069438369514338E-5 0.0 0.0 0.03787686947980693 5.524989065125808E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3690 0.0 26.72043 1 GGTATCA 1700 0.0 26.41028 1 TAACACG 70 8.129574E-4 18.856379 4 ATACCGT 1230 0.0 17.706602 6 TAGGACG 565 0.0 17.521414 4 CCGTCGT 1255 0.0 17.178587 9 TACCGTC 1255 0.0 17.178587 7 ACCGTCG 1275 0.0 17.081661 8 CGTCGTA 1260 0.0 16.936342 10 TCAACGC 5690 0.0 16.856964 4 CAACGCA 5815 0.0 16.532434 5 ATCAACG 5865 0.0 16.353985 3 CGCAATA 810 0.0 16.296389 36 AACGCAG 6030 0.0 15.979453 6 TATCAAC 6115 0.0 15.758545 2 ATACGAA 855 0.0 15.696236 40 TATACCG 170 4.499998E-8 15.528784 5 CGTCTTA 385 0.0 15.42842 15 GTCGTAG 1380 0.0 15.304198 11 TACGAAT 890 0.0 15.079431 41 >>END_MODULE