##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061976_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4413286 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30102989019973 32.0 32.0 32.0 32.0 32.0 2 31.4563486254913 32.0 32.0 32.0 32.0 32.0 3 31.57179752229971 32.0 32.0 32.0 32.0 32.0 4 31.64836269392013 32.0 32.0 32.0 32.0 32.0 5 31.62108347385599 32.0 32.0 32.0 32.0 32.0 6 35.26327525567117 36.0 36.0 36.0 36.0 36.0 7 35.275004611076646 36.0 36.0 36.0 36.0 36.0 8 35.23021530895573 36.0 36.0 36.0 36.0 36.0 9 35.31310751218027 36.0 36.0 36.0 36.0 36.0 10 35.19465631731096 36.0 36.0 36.0 36.0 36.0 11 35.313952687407976 36.0 36.0 36.0 36.0 36.0 12 35.24980388762478 36.0 36.0 36.0 36.0 36.0 13 35.268333391491055 36.0 36.0 36.0 36.0 36.0 14 35.235550789139886 36.0 36.0 36.0 36.0 36.0 15 35.21194298307429 36.0 36.0 36.0 36.0 36.0 16 35.233335206465206 36.0 36.0 36.0 36.0 36.0 17 35.2144556233156 36.0 36.0 36.0 36.0 36.0 18 35.20680304879403 36.0 36.0 36.0 36.0 36.0 19 35.2050492535494 36.0 36.0 36.0 36.0 36.0 20 35.201194756016264 36.0 36.0 36.0 36.0 36.0 21 35.19234556745246 36.0 36.0 36.0 36.0 36.0 22 35.17471403394205 36.0 36.0 36.0 36.0 36.0 23 35.1434667954898 36.0 36.0 36.0 36.0 36.0 24 35.13589216742355 36.0 36.0 36.0 36.0 36.0 25 35.1202818036266 36.0 36.0 36.0 36.0 36.0 26 35.080855398902315 36.0 36.0 36.0 36.0 36.0 27 35.06696778772098 36.0 36.0 36.0 36.0 36.0 28 35.05293244081621 36.0 36.0 36.0 36.0 36.0 29 35.031853815954825 36.0 36.0 36.0 36.0 36.0 30 35.012134269113766 36.0 36.0 36.0 36.0 36.0 31 35.00357556704913 36.0 36.0 36.0 36.0 36.0 32 34.98319460828054 36.0 36.0 36.0 36.0 36.0 33 34.963757390751475 36.0 36.0 36.0 36.0 36.0 34 34.95481054252999 36.0 36.0 36.0 36.0 36.0 35 34.94668235867786 36.0 36.0 36.0 36.0 36.0 36 34.920205488608715 36.0 36.0 36.0 36.0 36.0 37 34.909281655437695 36.0 36.0 36.0 36.0 36.0 38 34.902904774356344 36.0 36.0 36.0 36.0 36.0 39 34.879376500865796 36.0 36.0 36.0 32.0 36.0 40 34.87185036274558 36.0 36.0 36.0 32.0 36.0 41 34.845531878060925 36.0 36.0 36.0 32.0 36.0 42 34.83195038798755 36.0 36.0 36.0 32.0 36.0 43 34.81105099465568 36.0 36.0 36.0 32.0 36.0 44 34.783655081497095 36.0 36.0 36.0 32.0 36.0 45 34.76904601242702 36.0 36.0 36.0 32.0 36.0 46 34.7496180850278 36.0 36.0 36.0 32.0 36.0 47 34.71862145349293 36.0 36.0 36.0 32.0 36.0 48 34.70865019851421 36.0 36.0 36.0 32.0 36.0 49 34.681440314541135 36.0 36.0 36.0 32.0 36.0 50 34.277333488017774 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 13.0 20 37.0 21 78.0 22 262.0 23 783.0 24 2014.0 25 4685.0 26 9971.0 27 19171.0 28 33054.0 29 52387.0 30 79200.0 31 118249.0 32 178519.0 33 303648.0 34 696976.0 35 2914236.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.70390837070227 17.411914782504628 12.568678454276922 26.31549839251618 2 16.038820739592648 19.52627458444791 37.17489160126487 27.260013074694573 3 18.86432560694197 23.005244181641196 27.893476767350844 30.23695344406599 4 13.175534057842613 15.91868281366764 34.64384587810534 36.261937250384406 5 15.129569017183345 36.05386917001734 33.26134614012011 15.555215672679196 6 35.494878071384115 34.10962687833695 16.41971876239866 13.975776287880281 7 31.158279794239483 29.658603589252998 19.921890400939347 19.261226215568172 8 28.190899026258435 33.287736167563125 18.696001120253708 19.825363685924728 9 27.05131731775371 14.937939666724523 18.126584137080624 39.88415887844114 10 16.13964392032959 27.38936691559705 31.553546770861228 24.917442393212127 11 36.61983383809705 21.494097595306535 21.951783772907536 19.934284793688875 12 24.73975734628514 23.249665498602514 28.652398383517042 23.35817877159531 13 29.925162339354394 19.89290972758167 24.48894089347484 25.692987039589095 14 23.439201538264232 19.056322205268366 25.325460439228276 32.179015817239126 15 25.218827875646397 26.73710699918383 22.14220877595515 25.90185634921462 16 25.656266420680762 25.961641516329987 23.387966403981093 24.994125659008155 17 24.42236918250936 25.813939998450135 25.01018515455377 24.753505664486735 18 24.647025488304728 25.763021100637417 25.33986634427599 24.250087066781862 19 25.727360520029745 25.019905802615106 24.94472372739949 24.308009949955654 20 25.786994918739488 24.774141652174407 25.021984807201004 24.416878621885107 21 25.793587222935848 24.632048296019086 24.900329301338708 24.674035179706355 22 25.671755694056536 24.45447677762103 24.84411841879271 25.02964910952972 23 25.03606159769532 24.688270543328073 24.957639235380835 25.318028623595772 24 24.92410899301352 24.629495311491315 25.115193224383823 25.331202471111343 25 25.21700452634689 24.489086555281432 25.214942564156477 25.078966354215193 26 25.054619413377754 24.936249027364315 25.052965309591578 24.95616624966635 27 25.134996547904148 25.010372148848663 24.802498651224116 25.052132652023072 28 25.262223620043244 24.707707618341086 24.874728599402975 25.155340162212696 29 25.104820472847738 24.938571486837393 24.890421139928307 25.066186900386562 30 25.352378522454 24.902933751591526 24.750754720529645 24.993933005424836 31 25.221230716661992 24.73573992594147 24.88071192626957 25.16231743112697 32 25.096425536735968 24.853248739591006 24.88852886194981 25.161796861723218 33 24.963156621067885 24.815579175197744 24.96476540329678 25.256498800437587 34 25.20769817289053 24.765439567847313 25.113187431952156 24.91367482731 35 25.262560176413245 24.733406536734407 25.132883206435856 24.87115008041649 36 25.259608793922883 24.8711671037948 24.8165591312574 25.052664971024917 37 25.333962352222482 24.726854891958755 24.873686390578133 25.065496365240637 38 25.1794524940039 24.943505801234227 24.73601863464517 25.141023070116702 39 25.363320599712097 24.906559812709496 24.7012916328575 25.028827954720906 40 25.455556451839488 24.774974826002584 24.690411947203035 25.07905677495489 41 25.161717921527043 24.788069536213754 24.926743163752707 25.123469378506496 42 25.301858134098087 24.815916673219153 24.778482525708217 25.103742666974536 43 25.27594964474146 24.550590466073466 24.945367499304346 25.22809238988073 44 25.019589448662956 24.786578111935174 24.885057861951605 25.308774577450265 45 25.066771201428438 24.873487635403297 24.899092609566065 25.1606485536022 46 25.350840878341096 24.733055483989673 24.61028695161746 25.30581668605177 47 25.114451475837168 25.00838389349827 24.849860328866153 25.027304301798413 48 25.06032024566791 25.00344428149569 24.894745476661367 25.041489996175038 49 25.3089811705199 24.75669779270192 24.60977269436475 25.32454834241343 50 25.203780195417803 25.104578049859843 24.725534310505434 24.96610744421692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 96.5 2 96.0 3 260.0 4 424.0 5 486.5 6 549.0 7 459.0 8 369.0 9 478.5 10 588.0 11 1088.0 12 1588.0 13 2780.5 14 3973.0 15 5239.0 16 6505.0 17 6290.0 18 6075.0 19 6093.0 20 6111.0 21 7392.0 22 8673.0 23 11089.0 24 13505.0 25 17631.0 26 21757.0 27 27561.5 28 33366.0 29 40869.0 30 48372.0 31 57726.0 32 67080.0 33 78196.5 34 89313.0 35 103368.0 36 117423.0 37 131961.0 38 146499.0 39 162602.5 40 178706.0 41 198466.0 42 218226.0 43 236473.5 44 254721.0 45 274728.5 46 294736.0 47 305719.0 48 316702.0 49 327072.5 50 337443.0 51 345983.0 52 354523.0 53 357453.5 54 360384.0 55 351494.5 56 342605.0 57 327200.0 58 311795.0 59 289220.0 60 266645.0 61 232644.0 62 198643.0 63 171073.5 64 143504.0 65 121704.5 66 99905.0 67 82051.5 68 64198.0 69 52084.0 70 39970.0 71 31356.5 72 22743.0 73 19049.0 74 15355.0 75 12164.5 76 8974.0 77 7091.5 78 5209.0 79 4066.5 80 2924.0 81 2247.0 82 1570.0 83 1157.0 84 744.0 85 545.5 86 347.0 87 251.5 88 156.0 89 102.0 90 48.0 91 41.5 92 35.0 93 33.0 94 31.0 95 36.0 96 41.0 97 37.0 98 33.0 99 20.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032220889378118706 2 0.0041012524454567415 3 3.172239460574275E-4 4 0.0 5 2.265885328981625E-5 6 1.5861197302871374E-4 7 0.0 8 0.0 9 0.0 10 9.0635413159265E-5 11 0.0 12 2.265885328981625E-5 13 0.0 14 0.0 15 0.0 16 5.664713322454062E-4 17 0.0 18 1.5861197302871374E-4 19 0.0 20 2.4924738618797875E-4 21 6.797655986944875E-5 22 0.0 23 9.0635413159265E-5 24 0.0011102838112009962 25 3.172239460574275E-4 26 4.53177065796325E-4 27 5.664713322454062E-4 28 0.001540802023707505 29 5.891301855352226E-4 30 0.0014275077572584237 31 4.53177065796325E-4 32 8.15718718433385E-4 33 2.265885328981625E-4 34 7.024244519843037E-4 35 2.71906239477795E-4 36 2.4924738618797875E-4 37 0.00145016661054824 38 2.265885328981625E-5 39 7.930598651435687E-4 40 4.53177065796325E-5 41 0.0010423072513315475 42 0.004599747217832699 43 0.003670734232950232 44 0.004441135244803985 45 0.001835367116475116 46 0.002333861888851074 47 0.0014048489039686074 48 0.003942640472428028 49 0.003466804553341886 50 0.0016994139967362188 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4413286.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.549255243383335 #Duplication Level Percentage of deduplicated Percentage of total 1 56.824621691194785 20.20072980608981 2 16.413957435457522 11.670079248542184 3 8.497470241498384 9.06236215614241 4 4.918877476060601 6.9944972362963 5 3.184937812813731 5.661108362100919 6 2.1401527844849233 4.564850255729526 7 1.563679523964092 3.891134976137616 8 1.19316887431391 3.393301188915645 9 0.8916171926541323 2.8526694444945577 >10 4.1699705507237255 24.84706357363054 >50 0.14891593317684554 3.5541041380504588 >100 0.051476915239811474 2.9640839564028085 >500 7.690458376349271E-4 0.16107229832511377 >1k 3.845225799959713E-4 0.18294335914208815 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.359531197388975E-4 2 0.0 0.0 0.0 0.0 1.359531197388975E-4 3 0.0 0.0 0.0 2.265885328981625E-5 1.359531197388975E-4 4 0.0 0.0 0.0 2.265885328981625E-5 1.359531197388975E-4 5 0.0 0.0 0.0 2.265885328981625E-5 1.5861197302871374E-4 6 0.0 0.0 0.0 2.265885328981625E-5 2.0392967960834626E-4 7 0.0 2.265885328981625E-5 0.0 2.265885328981625E-5 2.0392967960834626E-4 8 0.0 2.265885328981625E-5 0.0 2.265885328981625E-5 2.265885328981625E-4 9 0.0 6.797655986944875E-5 0.0 2.265885328981625E-5 2.265885328981625E-4 10 0.0 6.797655986944875E-5 0.0 6.797655986944875E-5 2.4924738618797875E-4 11 0.0 6.797655986944875E-5 0.0 6.797655986944875E-5 2.4924738618797875E-4 12 0.0 9.0635413159265E-5 0.0 6.797655986944875E-5 7.024244519843037E-4 13 0.0 9.0635413159265E-5 0.0 9.0635413159265E-5 7.2508330527412E-4 14 0.0 9.0635413159265E-5 0.0 9.0635413159265E-5 7.2508330527412E-4 15 0.0 9.0635413159265E-5 0.0 1.8127082631853E-4 9.0635413159265E-4 16 0.0 1.1329426644908125E-4 0.0 2.4924738618797875E-4 9.0635413159265E-4 17 0.0 1.1329426644908125E-4 0.0 2.71906239477795E-4 9.743306914620988E-4 18 0.0 1.1329426644908125E-4 0.0 5.4381247895559E-4 9.743306914620988E-4 19 0.0 1.359531197388975E-4 0.0 7.930598651435688E-4 9.743306914620988E-4 20 0.0 1.359531197388975E-4 0.0 0.0011329426644908125 0.0010423072513315475 21 0.0 1.359531197388975E-4 0.0 0.0012235780776500775 0.0011102838112009962 22 0.0 1.359531197388975E-4 0.0 0.001359531197388975 0.0011329426644908125 23 0.0 1.359531197388975E-4 0.0 0.0018127082631853 0.0011329426644908125 24 0.0 1.359531197388975E-4 0.0 0.0024924738618797874 0.0011329426644908125 25 0.0 1.359531197388975E-4 0.0 0.0032855337270233562 0.0011329426644908125 26 0.0 1.8127082631853E-4 0.0 0.0040106170322974765 0.001178260371070445 27 0.0 1.8127082631853E-4 0.0 0.004916971163890126 0.0012462369309398937 28 0.0 1.8127082631853E-4 0.0 0.005845984148772593 0.00126889578422971 29 0.0 2.265885328981625E-4 0.0 0.0072508330527412 0.00126889578422971 30 0.0 2.265885328981625E-4 0.0 0.008972905902767236 0.00126889578422971 31 0.0 3.3988279934724373E-4 0.0 0.01135208549819794 0.00126889578422971 32 0.0 3.3988279934724373E-4 0.0 0.014909525464699093 0.0013142134908093424 33 0.0 3.3988279934724373E-4 0.0 0.017900494098954837 0.0013368723440991587 34 0.0 3.3988279934724373E-4 0.0 0.02211504081086066 0.0013821900506787912 35 0.0 3.3988279934724373E-4 0.0 0.026216293256317403 0.0013821900506787912 36 0.0 4.3051821250650877E-4 0.0 0.031835688872191834 0.0013821900506787912 37 0.0 4.3051821250650877E-4 0.0 0.041103159867726675 0.0013821900506787912 38 0.0 4.3051821250650877E-4 0.0 0.05290842243172095 0.0014728254638380564 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4005 0.0 26.75813 1 GGTATCA 1690 0.0 23.698124 1 TATCAAC 5945 0.0 17.910172 2 ATCAACG 5985 0.0 17.716957 3 TCAACGC 6025 0.0 17.635847 4 CAACGCA 6210 0.0 17.181314 5 AACGCAG 6490 0.0 16.406158 6 GTATAGA 795 0.0 15.500659 1 GTATAGG 590 0.0 14.172969 1 GGACCGA 875 0.0 13.828048 6 ACGCAGA 7900 0.0 13.533665 7 GTCCTAA 565 0.0 13.2421875 1 AGAGTAC 8205 0.0 13.057545 11 CGCAGAG 8200 0.0 13.011703 8 TATACTG 745 0.0 12.992796 5 GTACATG 9955 0.0 12.798721 1 CAGAGTA 8550 0.0 12.633583 10 AGGACCG 1325 0.0 12.618391 5 CTAGTAC 245 2.2202585E-8 12.570953 3 TTACACG 280 8.367351E-10 12.570953 4 >>END_MODULE