##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061972_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1879696 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18458303895949 32.0 32.0 32.0 32.0 32.0 2 31.183597773256952 32.0 32.0 32.0 32.0 32.0 3 31.412499148798528 32.0 32.0 32.0 32.0 32.0 4 31.538767970991053 32.0 32.0 32.0 32.0 32.0 5 31.4638579855466 32.0 32.0 32.0 32.0 32.0 6 35.10311561018377 36.0 36.0 36.0 36.0 36.0 7 35.11647468526826 36.0 36.0 36.0 36.0 36.0 8 35.05365974072403 36.0 36.0 36.0 36.0 36.0 9 35.18148572960734 36.0 36.0 36.0 36.0 36.0 10 34.999615363335344 36.0 36.0 36.0 36.0 36.0 11 35.18827618934125 36.0 36.0 36.0 36.0 36.0 12 35.092201079323466 36.0 36.0 36.0 36.0 36.0 13 35.13694395263915 36.0 36.0 36.0 36.0 36.0 14 35.097270516083455 36.0 36.0 36.0 36.0 36.0 15 35.054451358091946 36.0 36.0 36.0 36.0 36.0 16 35.076926268928595 36.0 36.0 36.0 36.0 36.0 17 35.06027730015917 36.0 36.0 36.0 36.0 36.0 18 35.05841636094347 36.0 36.0 36.0 36.0 36.0 19 35.04563291085367 36.0 36.0 36.0 36.0 36.0 20 35.05250902273559 36.0 36.0 36.0 36.0 36.0 21 35.03773056919842 36.0 36.0 36.0 36.0 36.0 22 35.02163860539151 36.0 36.0 36.0 36.0 36.0 23 34.98536146270461 36.0 36.0 36.0 36.0 36.0 24 34.97201515564219 36.0 36.0 36.0 32.0 36.0 25 34.958771524757196 36.0 36.0 36.0 32.0 36.0 26 34.900800448583176 36.0 36.0 36.0 32.0 36.0 27 34.88096958231544 36.0 36.0 36.0 32.0 36.0 28 34.86999387134941 36.0 36.0 36.0 32.0 36.0 29 34.853070390105636 36.0 36.0 36.0 32.0 36.0 30 34.83240534639644 36.0 36.0 36.0 32.0 36.0 31 34.8214046313872 36.0 36.0 36.0 32.0 36.0 32 34.79109547501298 36.0 36.0 36.0 32.0 36.0 33 34.769909070402875 36.0 36.0 36.0 32.0 36.0 34 34.75838114248261 36.0 36.0 36.0 32.0 36.0 35 34.756042998442304 36.0 36.0 36.0 32.0 36.0 36 34.7173840876397 36.0 36.0 36.0 32.0 36.0 37 34.7115698495927 36.0 36.0 36.0 32.0 36.0 38 34.70056541057703 36.0 36.0 36.0 32.0 36.0 39 34.6799243069092 36.0 36.0 36.0 32.0 36.0 40 34.670038665826816 36.0 36.0 36.0 32.0 36.0 41 34.64241824209872 36.0 36.0 36.0 32.0 36.0 42 34.61131959636026 36.0 36.0 36.0 32.0 36.0 43 34.59099822524493 36.0 36.0 36.0 32.0 36.0 44 34.55900102995378 36.0 36.0 36.0 32.0 36.0 45 34.54734169780645 36.0 36.0 36.0 32.0 36.0 46 34.52597122087827 36.0 36.0 36.0 32.0 36.0 47 34.50294515708923 36.0 36.0 36.0 32.0 36.0 48 34.47199653561001 36.0 36.0 36.0 32.0 36.0 49 34.45311795098782 36.0 36.0 36.0 32.0 36.0 50 33.9763876711979 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 7.0 21 29.0 22 112.0 23 258.0 24 780.0 25 1915.0 26 4245.0 27 8437.0 28 14914.0 29 24732.0 30 38676.0 31 60506.0 32 96504.0 33 170906.0 34 384858.0 35 1072812.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76698835380796 17.918160024053364 12.843166210344542 26.471685411794134 2 16.04059120491972 19.919568806231474 36.82639939264287 27.213440596205935 3 18.482167034723222 23.039826184382235 28.622173940106176 29.855832840788366 4 13.254643304023631 16.373232692946093 34.69177994739575 35.68034405563453 5 15.072658064207225 36.13314926091733 33.05802271113133 15.736169963744118 6 34.96065580921991 34.37082544862379 16.584729527640953 14.083789214515349 7 30.81354644580826 30.249944671904395 19.889386368859647 19.047122513427702 8 28.297926898817682 33.15865969816396 18.791123671061705 19.752289731956658 9 27.246427081825995 14.916454575633505 18.334720082396302 39.5023982601442 10 16.386000715009235 27.142208101735598 31.354963781377414 25.11682740187775 11 36.343696001906686 21.546622432563563 22.177628722942433 19.93205284258731 12 24.58073007550157 23.610679599254347 28.427203122206997 23.38138720303709 13 29.49780177220146 19.95891888901184 24.816832083485842 25.726447255300855 14 23.570087929111942 19.038557298627012 25.248125228760394 32.14322954350065 15 25.182795515870655 26.694369727870892 22.192152348039258 25.9306824082192 16 25.57181184274157 25.924158488425974 23.489279841334948 25.014749827497507 17 24.339680458967834 25.75937811220538 25.04357087529047 24.857370553536317 18 24.58354879416415 25.87248336429585 25.334576090125406 24.209391751414593 19 25.532798920676537 25.19668073986432 25.167367489211024 24.103152850248126 20 25.837357483376273 24.869805867234703 24.766118722578632 24.526717926810388 21 25.866044296524542 24.632653365225014 24.860190158408592 24.641112179841848 22 25.82151581957934 24.690694665520383 24.77347400856309 24.714315506337194 23 25.167686689762597 24.752566372434693 24.904080234250646 25.175666703552064 24 24.713887470207695 25.115072778345247 25.005266853932582 25.165772897514472 25 25.04403644637715 24.610667805859787 25.168524860176632 25.17677088758643 26 24.91678126920202 24.874859351433884 25.211085900031122 24.997273479332975 27 25.204700980426058 24.93274167643333 24.868156661752742 24.994400681387866 28 25.19897130769902 24.71771610731257 25.166146362017123 24.91716622297129 29 24.978294316302886 25.082407117761846 24.864392677098163 25.074905888837108 30 25.220463057541707 24.875617126319373 24.91243190330269 24.991487912836227 31 25.116654936002714 24.780003500579085 24.975780567955656 25.127560995462545 32 25.160664961419126 25.022663335617402 24.74575567860198 25.070916024361487 33 25.17778169094634 24.88821312842044 24.83235294274118 25.10165223789204 34 25.17842085243006 25.023075674913613 25.057070732596152 24.74143274006017 35 25.323416830922035 24.79306483232652 25.090506704545152 24.793011632206287 36 25.14008921660163 24.802534453727866 25.021931749565756 25.03544458010475 37 25.388245721463253 24.723874844188323 24.890446370193114 24.99743306415531 38 25.305794128412252 24.863488564108238 24.928233075986757 24.902484231492753 39 25.30201884997691 25.07134177872451 24.688830675794442 24.93780869550414 40 25.463904801627496 24.855348950042984 24.75517317693925 24.925573071390268 41 25.166330972300692 24.871228492418414 24.86463164592384 25.097808889357054 42 25.32315042402188 24.913014332684266 24.88550877304987 24.878326470243987 43 25.298901752524834 24.465333887342783 24.95638771652521 25.279376643607176 44 24.981924643719964 24.941225166003328 25.14482895844982 24.932021231826884 45 25.191031787114802 24.988442064819136 24.787927184742355 25.032598963323704 46 25.112892757200772 24.95025696136535 24.737824925784448 25.199025355649425 47 25.141646902601195 24.987950038144913 24.817601350021334 25.052801709232558 48 25.274694873621474 25.167014163950263 24.466504329839207 25.09178663258906 49 25.152277228881626 24.864933596009003 24.75879574235581 25.223993432753556 50 25.109021738378683 25.058959786047662 24.785294873411356 25.04672360216229 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 31.0 1 34.0 2 37.0 3 99.0 4 161.0 5 178.0 6 195.0 7 166.0 8 137.0 9 207.0 10 277.0 11 451.0 12 625.0 13 1128.0 14 1631.0 15 2079.0 16 2527.0 17 2535.5 18 2544.0 19 2492.5 20 2441.0 21 3018.5 22 3596.0 23 5072.5 24 6549.0 25 8048.0 26 9547.0 27 12208.5 28 14870.0 29 18151.5 30 21433.0 31 25480.5 32 29528.0 33 34164.5 34 38801.0 35 44788.5 36 50776.0 37 57526.0 38 64276.0 39 72384.0 40 80492.0 41 86986.5 42 93481.0 43 100123.5 44 106766.0 45 114698.5 46 122631.0 47 128521.5 48 134412.0 49 138612.0 50 142812.0 51 147455.0 52 152098.0 53 154179.5 54 156261.0 55 152140.5 56 148020.0 57 139693.0 58 131366.0 59 121362.0 60 111358.0 61 97671.0 62 83984.0 63 72131.0 64 60278.0 65 50150.5 66 40023.0 67 33077.5 68 26132.0 69 21004.5 70 15877.0 71 12490.0 72 9103.0 73 7383.5 74 5664.0 75 4582.5 76 3501.0 77 2877.5 78 2254.0 79 1858.5 80 1463.0 81 1170.5 82 878.0 83 674.5 84 471.0 85 345.5 86 220.0 87 142.5 88 65.0 89 45.0 90 25.0 91 24.5 92 24.0 93 23.0 94 22.0 95 18.5 96 15.0 97 12.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02878124973399954 2 0.004096407078591432 3 1.5960027578927656E-4 4 0.0 5 5.320009192975885E-5 6 1.5960027578927656E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.916011950868651E-4 17 0.0 18 2.128003677190354E-4 19 0.0 20 1.5960027578927656E-4 21 0.0 22 0.0 23 0.0 24 8.512014708761416E-4 25 1.5960027578927656E-4 26 5.852010112273474E-4 27 1.5960027578927656E-4 28 0.0014896025740332478 29 2.128003677190354E-4 30 8.512014708761416E-4 31 3.7240064350831196E-4 32 4.256007354380708E-4 33 1.5960027578927656E-4 34 5.852010112273474E-4 35 5.320009192975885E-5 36 5.320009192975885E-5 37 0.0012236021143844536 38 0.0 39 6.384011031571063E-4 40 0.0 41 5.320009192975885E-4 42 0.004043206986661673 43 0.0034580059754343254 44 0.0034580059754343254 45 0.00186200321754156 46 0.0019152033094713187 47 0.0011704020224546949 48 0.0034580059754343254 49 0.0034580059754343254 50 0.0013300022982439715 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1879696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.461626448902635 #Duplication Level Percentage of deduplicated Percentage of total 1 57.71640944421603 21.04434161126921 2 15.612104049789444 11.384854118896454 3 8.119597240250624 8.88161164468677 4 4.914735592715505 7.167970131068753 5 3.2451115434387154 5.9161022440942155 6 2.181351439785583 4.772137281074271 7 1.6316085363389192 4.1643770673981315 8 1.2265629540688632 3.5777984197857124 9 0.9115258860855329 2.991214472126011 >10 4.302685073259335 25.72159807805247 >50 0.10927302742707404 2.663021675208159 >100 0.028595389440989133 1.608650143392384 >500 4.3982318347751383E-4 0.10632311294744594 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0640018385951771E-4 2 0.0 0.0 0.0 0.0 1.0640018385951771E-4 3 0.0 0.0 0.0 0.0 1.0640018385951771E-4 4 0.0 0.0 0.0 0.0 2.1280036771903542E-4 5 0.0 0.0 0.0 0.0 2.1280036771903542E-4 6 0.0 0.0 0.0 0.0 2.6600045964879425E-4 7 0.0 0.0 0.0 0.0 2.6600045964879425E-4 8 0.0 0.0 0.0 0.0 2.6600045964879425E-4 9 0.0 0.0 0.0 0.0 3.7240064350831196E-4 10 0.0 0.0 0.0 0.0 3.7240064350831196E-4 11 0.0 0.0 0.0 0.0 3.7240064350831196E-4 12 0.0 0.0 0.0 0.0 3.7240064350831196E-4 13 0.0 0.0 0.0 0.0 5.320009192975885E-4 14 0.0 0.0 0.0 0.0 5.320009192975885E-4 15 0.0 0.0 0.0 0.0 9.044015628059005E-4 16 0.0 0.0 0.0 5.3200091929758855E-5 9.044015628059005E-4 17 0.0 0.0 0.0 1.5960027578927656E-4 9.044015628059005E-4 18 0.0 0.0 0.0 3.1920055157855313E-4 0.0010108017466654183 19 0.0 0.0 0.0 5.320009192975885E-4 0.0011704020224546949 20 0.0 0.0 0.0 6.916011950868651E-4 0.0011704020224546949 21 0.0 0.0 0.0 9.044015628059005E-4 0.0011704020224546949 22 0.0 0.0 0.0 0.0011704020224546949 0.0011704020224546949 23 0.0 0.0 0.0 0.0016492028498225244 0.0015428026659630068 24 0.0 0.0 0.0 0.001968403401401078 0.0015428026659630068 25 0.0 0.0 0.0 0.002926005056136737 0.0015428026659630068 26 0.0 0.0 0.0 0.00372400643508312 0.0015428026659630068 27 0.0 0.0 0.0 0.0046816080898187794 0.0016492028498225244 28 0.0 0.0 0.0 0.005586009652624679 0.0016492028498225244 29 0.0 0.0 0.0 0.007235212502447204 0.0016492028498225244 30 0.0 0.0 0.0 0.009469616363497076 0.0016492028498225244 31 0.0 0.0 0.0 0.013406423166299232 0.0016492028498225244 32 0.0 0.0 0.0 0.019311633370502464 0.001808803125611801 33 0.0 0.0 0.0 0.02505724329891642 0.00186200321754156 34 0.0 0.0 0.0 0.03160085460627676 0.0020216034933308365 35 0.0 0.0 0.0 0.03841046637328589 0.0020216034933308365 36 0.0 0.0 0.0 0.048997284667307905 0.0020748035852605953 37 0.0 0.0 0.0 0.06442531132693798 0.002128003677190354 38 0.0 0.0 0.0 0.08368374460551067 0.002128003677190354 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1810 0.0 27.845617 1 CGGATCG 110 7.2759576E-12 26.000237 26 GGTATCA 975 0.0 23.70198 1 CGCAATA 60 2.8734226E-4 22.000198 36 GGACGTA 70 8.126571E-4 18.856813 19 GCGTACT 70 8.1280246E-4 18.856312 14 TAGTACG 60 0.007415481 18.332525 4 ATCGATT 145 6.313712E-9 18.206577 29 ATCAACG 2750 0.0 18.159199 3 TATCAAC 2760 0.0 18.094847 2 TCAACGC 2800 0.0 17.756361 4 CAACGCA 2795 0.0 17.709415 5 AACGCAG 2835 0.0 17.537146 6 TCGGATC 210 1.5097612E-10 15.714847 25 GGCGTTA 170 4.4921762E-8 15.529965 42 TACTATA 245 5.456968E-12 15.26585 2 TAACGCT 90 0.004361482 14.666019 4 TCTAACC 225 4.274625E-10 14.666019 3 CCTATAT 185 1.266144E-7 14.27078 2 ACCGTCG 170 7.600611E-7 14.234665 8 >>END_MODULE