Basic Statistics
Measure | Value |
---|---|
Filename | SRR4061971_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5612948 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 9076 | 0.16169756071141225 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2200 | 0.0 | 13.7699175 | 1 |
GTATCAA | 6130 | 0.0 | 12.408961 | 1 |
GCGTAAC | 455 | 0.0 | 11.067379 | 11 |
CGTCGTA | 765 | 0.0 | 11.053633 | 10 |
CGCGTAA | 440 | 0.0 | 11.012703 | 10 |
TCGCGTA | 440 | 0.0 | 11.012604 | 9 |
CGGTCCA | 795 | 0.0 | 10.9950485 | 10 |
CCGTCGT | 725 | 0.0 | 10.746038 | 9 |
CGACCAT | 845 | 0.0 | 10.681773 | 10 |
AACCGCG | 265 | 0.0 | 10.397212 | 7 |
AAGACGG | 1015 | 0.0 | 10.20212 | 5 |
GTCTTAG | 625 | 0.0 | 10.180243 | 1 |
CGCCGGT | 840 | 0.0 | 10.179537 | 7 |
CTAGACA | 355 | 0.0 | 10.168799 | 4 |
CGGACCA | 1010 | 0.0 | 10.159561 | 9 |
CCGACCA | 895 | 0.0 | 10.084936 | 9 |
ACCGTCG | 815 | 0.0 | 10.025491 | 8 |
CGTTATT | 455 | 0.0 | 10.01989 | 2 |
GCCGGTC | 925 | 0.0 | 9.8603945 | 8 |
CAAGACG | 1100 | 0.0 | 9.845246 | 4 |