##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061968_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 38814 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.048925645385687 32.0 32.0 32.0 32.0 32.0 2 30.922527953831093 32.0 32.0 32.0 32.0 32.0 3 31.27618900396764 32.0 32.0 32.0 32.0 32.0 4 31.452207966197765 32.0 32.0 32.0 32.0 32.0 5 31.284716854743134 32.0 32.0 32.0 32.0 32.0 6 34.97632297624568 36.0 36.0 36.0 36.0 36.0 7 34.94772504766321 36.0 36.0 36.0 36.0 36.0 8 34.89413613644561 36.0 36.0 36.0 32.0 36.0 9 35.0586643994435 36.0 36.0 36.0 36.0 36.0 10 34.818931313443606 36.0 36.0 36.0 32.0 36.0 11 35.05134745195033 36.0 36.0 36.0 36.0 36.0 12 34.96727984747771 36.0 36.0 36.0 32.0 36.0 13 35.03604369557376 36.0 36.0 36.0 36.0 36.0 14 34.91549440923378 36.0 36.0 36.0 32.0 36.0 15 34.88926675941671 36.0 36.0 36.0 32.0 36.0 16 34.92237337043335 36.0 36.0 36.0 32.0 36.0 17 34.92386767661153 36.0 36.0 36.0 32.0 36.0 18 34.92543927448859 36.0 36.0 36.0 32.0 36.0 19 34.905137321584995 36.0 36.0 36.0 32.0 36.0 20 34.86090070593085 36.0 36.0 36.0 32.0 36.0 21 34.90943989282218 36.0 36.0 36.0 32.0 36.0 22 34.87406605863863 36.0 36.0 36.0 32.0 36.0 23 34.809295614984286 36.0 36.0 36.0 32.0 36.0 24 34.822460967692066 36.0 36.0 36.0 32.0 36.0 25 34.80805894780234 36.0 36.0 36.0 32.0 36.0 26 34.728963775957126 36.0 36.0 36.0 32.0 36.0 27 34.72399134332973 36.0 36.0 36.0 32.0 36.0 28 34.71376307517906 36.0 36.0 36.0 32.0 36.0 29 34.687818828257846 36.0 36.0 36.0 32.0 36.0 30 34.68274334003195 36.0 36.0 36.0 32.0 36.0 31 34.69024063482249 36.0 36.0 36.0 32.0 36.0 32 34.6425001288195 36.0 36.0 36.0 32.0 36.0 33 34.6099860874942 36.0 36.0 36.0 32.0 36.0 34 34.60617303034987 36.0 36.0 36.0 32.0 36.0 35 34.535373834183545 36.0 36.0 36.0 32.0 36.0 36 34.52823723398774 36.0 36.0 36.0 32.0 36.0 37 34.5297057762663 36.0 36.0 36.0 32.0 36.0 38 34.53650744576699 36.0 36.0 36.0 32.0 36.0 39 34.54351522646468 36.0 36.0 36.0 32.0 36.0 40 34.51486577008296 36.0 36.0 36.0 32.0 36.0 41 34.457103107126294 36.0 36.0 36.0 32.0 36.0 42 34.446874838975624 36.0 36.0 36.0 32.0 36.0 43 34.42149739784614 36.0 36.0 36.0 32.0 36.0 44 34.41791621579842 36.0 36.0 36.0 32.0 36.0 45 34.366980986242076 36.0 36.0 36.0 32.0 36.0 46 34.33304993043747 36.0 36.0 36.0 32.0 36.0 47 34.3009996393054 36.0 36.0 36.0 32.0 36.0 48 34.309501726181274 36.0 36.0 36.0 32.0 36.0 49 34.18423764621013 36.0 36.0 36.0 32.0 36.0 50 33.585278507754936 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 1.0 22 2.0 23 3.0 24 25.0 25 40.0 26 81.0 27 197.0 28 336.0 29 578.0 30 997.0 31 1453.0 32 2426.0 33 4112.0 34 9153.0 35 19410.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.553565445970676 19.33871092441306 12.475839496946113 27.631884132670155 2 16.49704995748847 20.248370391363718 36.675856027619616 26.578723623528198 3 18.61699386819189 24.596794970886794 26.222497037151545 30.563714123769774 4 14.773020044313908 15.594888442314629 32.87215953006647 36.759931983304995 5 14.80136033390014 36.35801514917298 31.256763023651256 17.58386149327562 6 32.97006234863709 33.67084041840573 15.947853867161331 17.411243365795848 7 30.081929200803835 28.68294945122894 20.255577884268565 20.979543463698665 8 26.315247075797394 32.72272891224816 18.9519245633019 22.010099448652547 9 26.245684546813003 13.70639459988664 17.674035141959088 42.373885711341266 10 18.39284794146442 25.230586901633433 28.94831761735456 27.428247539547584 11 36.37604987890967 21.494821456175607 20.683258618024425 21.4458700468903 12 23.1643221518009 22.43262740248364 26.735198639666102 27.667851806049367 13 29.901581903436902 18.921007883753287 23.682176534240224 27.495233678569587 14 22.759828927706497 18.565466068944193 22.589787190189107 36.0849178131602 15 27.131962693873348 25.68145514505075 19.923223579120936 27.263358581954968 16 25.84892049260576 26.87174730767249 20.804348946256507 26.474983253465247 17 23.483794507136597 24.426753233369404 24.7642603184418 27.325191941052196 18 24.1104784479427 24.50982918094453 23.517893489294824 27.861798881817947 19 25.599010666254447 24.29793373525017 24.2077600865667 25.895295511928683 20 26.266295666512086 23.558509816045756 22.754676147781726 27.420518369660428 21 26.96449734631834 23.048384603493584 22.844849796465194 27.142268253722886 22 25.88756634204153 22.801051167104653 23.360127788942133 27.951254701911683 23 25.799969083320452 23.36785695882929 23.682176534240224 27.14999742361004 24 24.076364198485084 24.62255887051064 22.60266914000103 28.698407791003245 25 25.805121863245223 23.700211263976918 22.978822074509196 27.515844798268667 26 24.862803699791307 24.816427485636254 23.358153196094094 26.962615618478345 27 25.686607924975526 22.76755809759365 23.924357190704384 27.62147678672644 28 25.548799340410184 22.84602700195816 23.63186643306194 27.973307224569723 29 24.828670067501417 23.95012109032823 23.568815375895298 27.652393466275054 30 25.4547328283609 23.517287576647604 23.403926418302675 27.62405317668882 31 24.990982635131655 24.303086515174936 24.15623228731901 26.549698562374402 32 24.975524295357346 23.512134796722833 24.57360746122533 26.938733446694492 33 26.194156747565312 23.39104446849075 22.370794043386407 28.044004740557533 34 25.34394805997836 24.1072808780337 23.42453753800175 27.12423352398619 35 25.006440974905964 23.81872520224661 23.97073221002731 27.204101612820114 36 24.908538156335343 23.115370742515587 22.888648425825732 29.087442675323338 37 25.725253774411293 24.27216983562632 23.921780800742003 26.080795589220386 38 25.72010099448653 22.87061369608904 23.450301437625598 27.958983871798836 39 26.27402483639924 23.52244035657237 23.076724893079817 27.126809913948573 40 25.712371824599373 24.47055186272994 22.78816921729273 27.028907095377956 41 26.858865357860566 24.20518369660432 22.424898232596487 26.511052712938632 42 24.771989488328952 23.0793012830422 23.409079198227445 28.739630030401404 43 26.098830318957077 23.77492657288607 22.855155356314732 27.27108775184212 44 25.671149585201213 23.318905549543977 23.847065491832844 27.162879373421962 45 25.650538465502137 23.7362807234503 24.279899005513474 26.333281805534085 46 26.565156902148708 23.277683310145825 23.45545421755037 26.7017055701551 47 25.986138664880325 22.06219565609461 23.571999072475716 28.379666606549353 48 25.565517596743444 23.75173906322461 23.10764157262843 27.575101767403513 49 27.013448755603648 23.1643221518009 22.597516360076263 27.224712732519198 50 25.84443356607322 23.01033158993121 23.914667765954707 27.230567078040863 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 2.0 2 3.0 3 3.0 4 3.0 5 5.0 6 7.0 7 5.0 8 3.0 9 5.5 10 8.0 11 10.0 12 12.0 13 33.5 14 55.0 15 65.0 16 75.0 17 76.0 18 77.0 19 60.5 20 44.0 21 45.0 22 46.0 23 37.5 24 29.0 25 40.0 26 51.0 27 51.5 28 52.0 29 53.0 30 54.0 31 77.0 32 100.0 33 121.0 34 142.0 35 207.5 36 273.0 37 354.0 38 435.0 39 575.5 40 716.0 41 900.0 42 1084.0 43 1471.5 44 1859.0 45 2423.5 46 2988.0 47 3261.0 48 3534.0 49 3591.5 50 3649.0 51 4084.0 52 4519.0 53 4469.0 54 4419.0 55 4117.5 56 3816.0 57 3329.5 58 2843.0 59 2675.0 60 2507.0 61 2098.5 62 1690.0 63 1443.0 64 1196.0 65 1020.0 66 844.0 67 706.0 68 568.0 69 510.0 70 452.0 71 360.5 72 269.0 73 214.0 74 159.0 75 133.0 76 107.0 77 84.5 78 62.0 79 44.0 80 26.0 81 24.0 82 22.0 83 14.5 84 7.0 85 5.5 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.028340289586231773 2 0.0025763899623847068 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0025763899623847068 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0025763899623847068 27 0.0 28 0.0051527799247694135 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0025763899623847068 48 0.0 49 0.0 50 0.0025763899623847068 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 38814.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.3396712526408 #Duplication Level Percentage of deduplicated Percentage of total 1 65.79895409645556 29.175039934044417 2 12.678675188843696 11.24336579584686 3 6.6240557815223715 8.811253671355697 4 3.933759442184776 6.9768640181377855 5 2.6380011621150494 5.848405214613283 6 1.8303312027890761 4.8693770289070955 7 1.47588611272516 4.580821353120008 8 1.063335270191749 3.77183490493121 9 0.8192911098198722 3.2694388622661927 >10 3.131900058105753 21.319626938733446 >50 0.005810575246949448 0.13397227804400474 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCAGTACTGTACAGAATGGGGCTACCTCCAAACTGGCAATGTTCCAGA 52 0.13397227804400474 No Hit GTACTGCACCAGTGAGGCAAGAATCGCCGCATTCATTGATGCCATGAGAC 50 0.12881949811923535 No Hit TCATACAACTGCTCCGCATTCTGCTTCGCATGACGCTTGGCCTTTTCACG 49 0.1262431081568506 No Hit GTATAGGCTTGATGAACAGAGACTCCTCTAAGCGAGCTGCCAAAGTACTT 49 0.1262431081568506 No Hit ATATAATCCGCGCCTTTCGTCTCGGCGAGACGGTCGACTTCCACGCCGGC 49 0.1262431081568506 No Hit TGCATACGCTGCTCGCAAGGTTCCAGCCGCCAACAGCTCATGGCGTGAGG 43 0.11078476838254236 No Hit CACTATACATTCGCCAAAAAGCCCAGACCTATAATTTCAAGCCCATTCTT 40 0.10305559849538826 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.0051527799247694135 0.0 30 0.0 0.0 0.0 0.0051527799247694135 0.0 31 0.0 0.0 0.0 0.0051527799247694135 0.0 32 0.0 0.0 0.0 0.0051527799247694135 0.0 33 0.0 0.0 0.0 0.018034729736692946 0.0 34 0.0 0.0 0.0 0.025763899623847064 0.0 35 0.0 0.0 0.0 0.030916679548616478 0.0 36 0.0 0.0 0.0 0.04122223939815531 0.0 37 0.0 0.0 0.0 0.05152779924769413 0.0 38 0.0 0.0 0.0 0.08244447879631062 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGAGCC 30 0.0056776227 29.333332 18 GTATCAA 105 3.6379788E-12 27.238096 1 GATGTTG 45 0.0013740024 24.444445 28 TATCAAC 155 6.511982E-10 18.451612 2 CATGGGG 75 0.0012605953 17.6 16 ATCAACG 145 1.1602242E-7 16.689655 3 AGAGTAC 150 1.7071761E-7 16.133333 11 AACGCAG 155 2.4786823E-7 15.612903 6 TCAACGC 155 2.4786823E-7 15.612903 4 CGCAGAG 155 2.4786823E-7 15.612903 8 CAACGCA 155 2.4786823E-7 15.612903 5 CAGAGTA 160 3.554178E-7 15.125 10 ACGCAGA 165 5.0369454E-7 14.666667 7 AGTACAT 115 0.0013810041 13.391303 13 GCAGAGT 200 4.3869422E-6 12.099999 9 GAGTACA 130 0.0034694348 11.846154 12 GTACATG 140 0.0060322625 11.0 14 >>END_MODULE