##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061967_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 67592 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.191102497336963 32.0 32.0 32.0 32.0 32.0 2 31.514750266303704 32.0 32.0 32.0 32.0 32.0 3 31.625059178601017 32.0 32.0 32.0 32.0 32.0 4 31.717333412238133 32.0 32.0 32.0 32.0 32.0 5 31.66923600426086 32.0 32.0 32.0 32.0 32.0 6 35.31978636525032 36.0 36.0 36.0 36.0 36.0 7 35.34344301100722 36.0 36.0 36.0 36.0 36.0 8 35.29197242277193 36.0 36.0 36.0 36.0 36.0 9 35.33261332702095 36.0 36.0 36.0 36.0 36.0 10 35.26256065806604 36.0 36.0 36.0 36.0 36.0 11 35.369318854302286 36.0 36.0 36.0 36.0 36.0 12 35.31340987099065 36.0 36.0 36.0 36.0 36.0 13 35.31172328086164 36.0 36.0 36.0 36.0 36.0 14 35.27270978814061 36.0 36.0 36.0 36.0 36.0 15 35.23150668718191 36.0 36.0 36.0 36.0 36.0 16 35.25420168067227 36.0 36.0 36.0 36.0 36.0 17 35.24491064031246 36.0 36.0 36.0 36.0 36.0 18 35.22745295301219 36.0 36.0 36.0 36.0 36.0 19 35.168229968043555 36.0 36.0 36.0 36.0 36.0 20 35.1718546573559 36.0 36.0 36.0 36.0 36.0 21 35.14165877618653 36.0 36.0 36.0 36.0 36.0 22 35.1533021659368 36.0 36.0 36.0 36.0 36.0 23 35.100707184282165 36.0 36.0 36.0 36.0 36.0 24 35.03358385607764 36.0 36.0 36.0 36.0 36.0 25 35.02405610131377 36.0 36.0 36.0 36.0 36.0 26 34.94872174221801 36.0 36.0 36.0 36.0 36.0 27 34.98946620901882 36.0 36.0 36.0 36.0 36.0 28 34.92979938454255 36.0 36.0 36.0 36.0 36.0 29 34.83595691797846 36.0 36.0 36.0 32.0 36.0 30 34.796839862705646 36.0 36.0 36.0 32.0 36.0 31 34.79820097052906 36.0 36.0 36.0 32.0 36.0 32 34.80110072197893 36.0 36.0 36.0 32.0 36.0 33 34.77091963545982 36.0 36.0 36.0 32.0 36.0 34 34.66738667297905 36.0 36.0 36.0 32.0 36.0 35 34.65816960587052 36.0 36.0 36.0 32.0 36.0 36 34.58421114924843 36.0 36.0 36.0 32.0 36.0 37 34.64192507989111 36.0 36.0 36.0 32.0 36.0 38 34.592806841046276 36.0 36.0 36.0 32.0 36.0 39 34.4566220854539 36.0 36.0 36.0 32.0 36.0 40 34.456133861995504 36.0 36.0 36.0 32.0 36.0 41 34.38300390578767 36.0 36.0 36.0 32.0 36.0 42 34.48800153864363 36.0 36.0 36.0 32.0 36.0 43 34.385089951473546 36.0 36.0 36.0 32.0 36.0 44 34.17697360634395 36.0 36.0 36.0 32.0 36.0 45 34.20151793111611 36.0 36.0 36.0 32.0 36.0 46 34.083693336489524 36.0 36.0 36.0 32.0 36.0 47 34.188025210084035 36.0 36.0 36.0 32.0 36.0 48 34.12288436501361 36.0 36.0 36.0 32.0 36.0 49 33.942478399810625 36.0 36.0 36.0 32.0 36.0 50 33.630681145697714 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 1.0 21 3.0 22 11.0 23 17.0 24 54.0 25 120.0 26 272.0 27 426.0 28 737.0 29 1072.0 30 1582.0 31 2240.0 32 3310.0 33 5159.0 34 10299.0 35 42288.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.92884837363483 21.1353479148785 12.444135318317697 24.49166839316897 2 16.211457655205066 21.59259040066284 36.428064153400015 25.76788779073208 3 17.18990413066635 27.691146881287725 27.30352704462067 27.815421943425257 4 12.535507160610724 15.86874186294236 34.52923422890283 37.066516747544085 5 16.398390342052313 34.69197538170198 30.69298141791928 18.21665285832643 6 32.184282163569655 35.93028760800095 16.41022606225589 15.475204166173512 7 27.879038939519468 31.60877026867085 21.45076340395313 19.06142738785655 8 25.825541484199316 33.73624097526334 19.67244644336608 20.765771097171264 9 26.241271156349868 13.196828026985441 20.478754882234583 40.08314593443011 10 17.913362528109836 25.486743993371995 27.344952065333178 29.254941413184994 11 35.69949106403125 24.68043555450349 19.974257308557224 19.645816072908037 12 23.838619955024264 24.933424073854894 27.586104864481005 23.641851106639837 13 28.232631080601255 23.624097526334477 23.726180613090307 24.41709077997396 14 22.622499704106993 17.47248195052669 25.652444076222036 34.252574269144276 15 27.534323588590365 24.80175168659013 21.40933838324062 26.254586341578882 16 27.08792590729535 27.413413028361767 20.773475758606917 24.72518530573597 17 22.453840691206057 26.95881169369156 26.12883181441591 24.458515800686474 18 22.814830157415077 28.026985442064152 24.701148064859744 24.457036335661027 19 25.202686708486212 22.694993490353887 26.688069594034797 25.414250207125104 20 27.668954905906023 22.77192567167712 23.593028760800095 25.966090661616757 21 28.012605228506754 24.248790519447855 23.78719060229912 23.951413649746268 22 25.94241922120961 24.581311397798554 25.9927210320748 23.483548348917033 23 23.820866374718904 26.282696177062377 25.797431648715826 24.0990057995029 24 24.387501479465026 22.144632500887678 26.804947331045092 26.6629186886022 25 26.12883181441591 23.4510001183572 23.33116345129601 27.08900461593088 26 26.262372209317807 24.85242118033466 23.84784956577059 25.03735704457694 27 23.176162506842626 25.689810773623705 27.946028317379536 23.187998402154133 28 23.73723923657346 26.039354934161857 25.68871134783252 24.534694481432165 29 23.973605953455344 23.399565030847302 26.40440295305588 26.222426062641475 30 25.11799257275592 22.996345559188626 25.26446611134948 26.621195756705973 31 25.211936500421654 25.331774940450654 23.739847021053098 25.716441538074598 32 22.856931498742416 25.03920698328155 27.063175025891407 25.040686492084628 33 24.027222961976623 25.4741825713863 26.239088622577306 24.259505844059774 34 23.45282655974908 22.732316432661154 27.605746327173737 26.209110680416032 35 26.493564136706617 23.37032105341027 24.561325639887556 25.57478916999556 36 27.501775358030535 24.674517694401704 22.650609539590484 25.173097407977274 37 23.102188161145715 25.28886981994644 26.641120859285998 24.967821159621842 38 22.918392709196354 25.179015268079063 26.948455438513435 24.95413658421115 39 23.92478288529538 21.930434525306623 27.453359175038095 26.6914234143599 40 26.46062345578553 23.8907546862748 24.509180216300987 25.139441641638683 41 27.14710538385288 25.26667751623737 23.26641120859286 24.319805891316893 42 23.403562762620584 25.995738888560098 26.29312895780316 24.307569391016155 43 23.189027638042255 27.20601290169853 25.112445996330713 24.492513463928507 44 24.087526445828587 22.76190617093992 26.21798760189966 26.93257978133183 45 25.732715894127917 22.748590788714473 25.393913390836058 26.12477992632155 46 27.97751146619322 25.531883414706318 22.06983281550525 24.420772303595207 47 23.168422298496864 25.392058231743402 25.929104035980586 25.510415433779144 48 22.886521674803966 26.816097055777483 24.80248557478917 25.49489569462938 49 24.01757708468959 23.23193466295792 26.27981298455347 26.470675267799017 50 25.54444312936442 24.704106994910642 24.40377559474494 25.347674280979998 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 37.0 2 23.0 3 31.0 4 39.0 5 43.5 6 48.0 7 30.0 8 12.0 9 25.0 10 38.0 11 71.0 12 104.0 13 174.0 14 244.0 15 305.5 16 367.0 17 326.0 18 285.0 19 215.0 20 145.0 21 133.5 22 122.0 23 116.5 24 111.0 25 142.5 26 174.0 27 172.0 28 170.0 29 231.5 30 293.0 31 496.0 32 699.0 33 988.0 34 1277.0 35 1654.0 36 2031.0 37 2474.0 38 2917.0 39 3574.0 40 4231.0 41 4474.0 42 4717.0 43 4580.0 44 4443.0 45 4275.5 46 4108.0 47 4346.5 48 4585.0 49 4742.5 50 4900.0 51 4856.5 52 4813.0 53 4517.5 54 4222.0 55 3927.5 56 3633.0 57 3504.0 58 3375.0 59 3304.0 60 3233.0 61 3136.5 62 3040.0 63 2726.0 64 2412.0 65 2247.5 66 2083.0 67 1801.5 68 1520.0 69 1322.0 70 1124.0 71 865.0 72 606.0 73 634.0 74 662.0 75 513.5 76 365.0 77 267.0 78 169.0 79 121.5 80 74.0 81 52.5 82 31.0 83 51.0 84 71.0 85 43.0 86 15.0 87 9.0 88 3.0 89 1.5 90 0.0 91 1.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02663037045804237 2 0.005917860101787194 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0014794650254467984 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0014794650254467984 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0014794650254467984 27 0.0014794650254467984 28 0.002958930050893597 29 0.0014794650254467984 30 0.004438395076340395 31 0.0014794650254467984 32 0.002958930050893597 33 0.002958930050893597 34 0.0014794650254467984 35 0.002958930050893597 36 0.0 37 0.0014794650254467984 38 0.0 39 0.0014794650254467984 40 0.0014794650254467984 41 0.0014794650254467984 42 0.005917860101787194 43 0.005917860101787194 44 0.0014794650254467984 45 0.0014794650254467984 46 0.002958930050893597 47 0.0 48 0.002958930050893597 49 0.005917860101787194 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 67592.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.019824831340987 #Duplication Level Percentage of deduplicated Percentage of total 1 61.293184170321815 18.40010652148183 2 11.43856882361638 6.867676648124038 3 6.175151545019959 5.561309030654515 4 3.9919175989354883 4.793466682447627 5 2.9274062392193585 4.394011125576991 6 2.2128037060765857 3.985678778553675 7 1.6805480262185206 3.531483015741508 8 1.4242767729535262 3.420523138832998 9 1.1482923463604553 3.1024381583619363 >10 7.397368291360702 39.39519469759735 >50 0.2907693065891282 5.756598414013492 >100 0.019713173328076487 0.7915137886140372 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 210 0.3106876553438277 No Hit CTAATAAACAGCATGATGAAGAAACGTTTCGCATCGAGAAAAATTGATCC 123 0.18197419812995622 No Hit ATACTAGAGTCCGCAAAAAGGACCTAATAATCTCATTTGGTTCCCTCGTA 101 0.14942596757012663 No Hit GTACTGGTCGTAGCGGTCGACGAACTGGTCCTCGAGCTCACCGATCTCGT 101 0.14942596757012663 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 100 0.14794650254467984 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96 0.14202864244289265 No Hit ATGCTACCCTCACCTTTCGGGCTGGCTTGAATGATGCCCTTGAAGCTCTT 93 0.13759024736655226 No Hit CTATAACCCTGCTGATACCCGCTACTTTGCCCGTACCCGGGAGCGTCGTT 86 0.12723399218842465 No Hit ATCCTGGATGATGGCCTTGGAAGCCTCGTATCCGTCGTAGGCGTTGCGGG 84 0.12427506213753108 No Hit GTCCTGGTCCTGACCAGAGAGGTCGTGGCCAGATGTTTGGTTGCGACGGC 84 0.12427506213753108 No Hit GATCAAGGCAGTTCTGAGAGCGGGAGTGCTTGCCAGGCGGCATGTCTCAG 83 0.12279559711208428 No Hit CCTCATAACCACCGCAAACCGCCAAAATGCTCGCCGCCCGCACCGCCACC 82 0.12131613208663747 No Hit CACATACTCCATGCGCCAGTCGCGCGCGCCGACTGCCTCGCAGATCCAGA 81 0.11983666706119067 No Hit GAATAAGCTAAGCCACCCTTCATTGATCAGGCTTTTCATTAATCTAGAAA 81 0.11983666706119067 No Hit GTCTCATATCGCGCTTAAAATGGGTTGTCCTCTGGAGCAACCTCCTTGTT 80 0.11835720203574387 No Hit ACCAAGCACTGTACGACTCTCTGCACGCCAAAGACCACACCTCATAACCA 79 0.11687773701029708 No Hit GGGCTACAGCGGCGGACATGAGCAGCAGGTTTACGGAGCAGGAGGCTACC 76 0.11243934193395667 No Hit CACATACACAGCAAAATACCTATCACACCGCAATCATGGACATGATCGGC 74 0.1094804118830631 No Hit GTACATGGGGAGCTGTGAATGAGTTGGTTGTTCGAGAGGGAAGGCATTTT 73 0.1080009468576163 No Hit GTGAATGAGTTGGTTGTTCGAGAGGGAAGGCATTTTCTTATAATGGCGTT 72 0.10652148183216947 No Hit CTCTAAGACAAGAGAACCAACCCAATGCAAAACGCCATATGCTCGCAGAA 70 0.1035625517812759 No Hit TTTTTATAGTGGGTGTTTCAGCTCCATCCGCGAGGGACCTCACCTACATA 69 0.1020830867558291 No Hit GTCCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCT 69 0.1020830867558291 No Hit GGGTAGCATCGTGCACTGGACTTTGGAGTATGAAAAGTTGCACAACCAAA 69 0.1020830867558291 No Hit CTCCCAGAGCGCCCATGCTCCCCAGTAAAACTCCGAAATGCTCCCTCTAA 68 0.1006036217303823 No Hit ATCATGGACATGATCGGCAAGGTCGCTAAATCGCTGCTCGACAAGAACGG 68 0.1006036217303823 No Hit ATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGA 68 0.1006036217303823 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0014794650254467984 0.0 6 0.0 0.0 0.0 0.0014794650254467984 0.0 7 0.0 0.0 0.0 0.0014794650254467984 0.0 8 0.0 0.0 0.0 0.0014794650254467984 0.0 9 0.0 0.0 0.0 0.0014794650254467984 0.0 10 0.0 0.0 0.0 0.0014794650254467984 0.0 11 0.0 0.0 0.0 0.0014794650254467984 0.0 12 0.0 0.0 0.0 0.0014794650254467984 0.0 13 0.0 0.0 0.0 0.0014794650254467984 0.0 14 0.0 0.0 0.0 0.0014794650254467984 0.0 15 0.0 0.0 0.0 0.0014794650254467984 0.0 16 0.0 0.0 0.0 0.0014794650254467984 0.0 17 0.0 0.0 0.0 0.0014794650254467984 0.0 18 0.0 0.0 0.0 0.0014794650254467984 0.0 19 0.0 0.0 0.0 0.0014794650254467984 0.0 20 0.0 0.0 0.0 0.0014794650254467984 0.0 21 0.0 0.0 0.0 0.0014794650254467984 0.0 22 0.0 0.0 0.0 0.0014794650254467984 0.0 23 0.0 0.0 0.0 0.0014794650254467984 0.0 24 0.0 0.0 0.0 0.0014794650254467984 0.0 25 0.0 0.0 0.0 0.0014794650254467984 0.0 26 0.0 0.0 0.0 0.0014794650254467984 0.0 27 0.0 0.0 0.0 0.0014794650254467984 0.0 28 0.0 0.0 0.0 0.002958930050893597 0.0 29 0.0 0.0 0.0 0.005917860101787194 0.0 30 0.0 0.0 0.0 0.010356255178127589 0.0 31 0.0 0.0 0.0 0.016274115279914785 0.0 32 0.0 0.0 0.0 0.03254823055982957 0.0 33 0.0 0.0 0.0 0.04290448573795715 0.0 34 0.0 0.0 0.0 0.060658066043318734 0.0 35 0.0 0.0 0.0 0.0858089714759143 0.0 36 0.0 0.0 0.0 0.11687773701029708 0.0 37 0.0 0.0 0.0 0.15978222274825424 0.0 38 0.0 0.0 0.0 0.22044028879157296 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCTCG 20 7.803912E-4 44.0 35 CGGGAAA 20 7.803912E-4 44.0 40 ACCTCGG 20 7.803912E-4 44.0 36 GGGAAAA 20 7.803912E-4 44.0 41 AAGCATA 20 7.803912E-4 44.0 33 TCAAGGC 35 7.1889644E-6 37.714287 3 GCAGTTC 35 7.1889644E-6 37.714287 8 CAAGGCA 35 7.1889644E-6 37.714287 4 ATCAAGG 35 7.1889644E-6 37.714287 2 GTGCTTG 35 7.1889644E-6 37.714287 26 TGAGAGC 35 7.1889644E-6 37.714287 15 GCGGGAG 30 1.2881715E-4 36.666664 20 GGGAGTG 30 1.2881715E-4 36.666664 22 AGCGGGA 30 1.2881715E-4 36.666664 19 CGGGAGT 30 1.2881715E-4 36.666664 21 GAAAAGG 25 0.0023371524 35.2 43 AATGACA 25 0.0023371524 35.2 26 GTCTCAG 40 1.79489E-5 33.0 44 AAGGCAG 40 1.79489E-5 33.0 5 GCTTGCC 40 1.79489E-5 33.0 28 >>END_MODULE