##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061966_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 31956 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.53739516835649 32.0 32.0 32.0 32.0 32.0 2 30.20484416072099 32.0 32.0 32.0 21.0 32.0 3 30.405933158092378 32.0 32.0 32.0 32.0 32.0 4 30.236919514332207 32.0 32.0 32.0 21.0 32.0 5 30.362467142320693 32.0 32.0 32.0 21.0 32.0 6 33.84600700963825 36.0 36.0 36.0 32.0 36.0 7 33.64942420828639 36.0 36.0 36.0 21.0 36.0 8 33.454437351358116 36.0 36.0 36.0 21.0 36.0 9 33.39939291525848 36.0 36.0 36.0 21.0 36.0 10 33.324258355238456 36.0 36.0 36.0 21.0 36.0 11 33.743397171110274 36.0 36.0 36.0 27.0 36.0 12 33.523094254600075 36.0 36.0 36.0 21.0 36.0 13 33.620165227187385 36.0 36.0 36.0 27.0 36.0 14 33.4777819501815 36.0 36.0 36.0 21.0 36.0 15 33.59885467517837 36.0 36.0 36.0 27.0 36.0 16 33.53001001376893 36.0 36.0 36.0 21.0 36.0 17 33.42827638002253 36.0 36.0 36.0 21.0 36.0 18 33.565746651646016 36.0 36.0 36.0 27.0 36.0 19 33.42643009137564 36.0 36.0 36.0 21.0 36.0 20 33.23260107648016 36.0 36.0 36.0 21.0 36.0 21 33.2247465264739 36.0 36.0 36.0 21.0 36.0 22 33.274752785079485 36.0 36.0 36.0 21.0 36.0 23 33.27763174364752 36.0 36.0 36.0 21.0 36.0 24 33.262642383277004 36.0 36.0 36.0 21.0 36.0 25 32.96429465515083 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 4.0 7 3.0 8 5.0 9 4.0 10 2.0 11 0.0 12 1.0 13 3.0 14 47.0 15 48.0 16 39.0 17 68.0 18 92.0 19 116.0 20 185.0 21 233.0 22 234.0 23 336.0 24 382.0 25 447.0 26 564.0 27 628.0 28 768.0 29 940.0 30 1176.0 31 1515.0 32 2111.0 33 2883.0 34 6005.0 35 13116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.59849788765452 20.372398685651696 11.847911125019559 22.18119230167423 2 16.150331706095884 21.082112905244713 39.3447239954938 23.422831393165602 3 19.257729377894606 26.855676555263486 28.11678558017274 25.76980848666917 4 12.088496682939041 16.83877832019026 32.87958442858931 38.193140568281386 5 13.108391498951455 39.09042536542614 31.133994804219224 16.667188331403175 6 29.77584371673658 37.906204996556255 16.182455700957988 16.135495585749172 7 27.89575894255466 34.02242686211865 18.759005199523898 19.32280899580279 8 28.478356198709516 32.78519075361774 17.932092964981518 20.804360082691222 9 27.59171653247282 15.282433660202388 19.32391365644287 37.80193615088192 10 18.784270719097602 27.48864170452765 26.529844900517 27.197242675857748 11 33.58403058506471 25.32355614051581 20.434959731753942 20.65745354266554 12 23.694187686041047 26.727244242519195 27.45417515274949 22.124392918690273 13 29.292897647169397 22.250070490930167 26.069112440865943 22.387919421034493 14 22.98342887573223 21.486075870062336 25.633555743507813 29.896939510697617 15 25.354848817170613 27.6672411091963 23.34952216825944 23.62838790537365 16 22.720010025376737 29.10492183339077 23.559635326921267 24.615432814311227 17 20.436103887966414 28.55039318274382 25.912465929383753 25.10103699990601 18 20.835160704216527 28.44120042603847 27.357308439320843 23.36633043042416 19 24.2841927197544 25.186391830085835 27.817805901885844 22.711609548273916 20 25.041495725157368 24.477780213585543 27.531239234599603 22.94948482665748 21 26.00294384767154 23.945382230434372 27.36838808681219 22.683285835081897 22 24.553711243344818 25.339805825242717 27.237707485123707 22.868775446288755 23 23.559258331245303 26.6036081182661 27.349035329491358 22.488098220997244 24 23.632947071719386 26.38584403382399 27.2471030378954 22.734105856561225 25 22.96201183802574 26.316119131878114 27.340202311233597 23.381666718862547 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 577.0 1 577.0 2 341.0 3 105.0 4 105.0 5 105.0 6 183.5 7 262.0 8 262.0 9 262.0 10 254.0 11 246.0 12 246.0 13 246.0 14 182.5 15 119.0 16 119.0 17 119.0 18 167.5 19 216.0 20 216.0 21 216.0 22 373.0 23 530.0 24 530.0 25 530.0 26 716.0 27 902.0 28 902.0 29 902.0 30 1079.5 31 1257.0 32 1257.0 33 1257.0 34 1450.0 35 1643.0 36 1643.0 37 1643.0 38 1905.5 39 2168.0 40 2168.0 41 2168.0 42 2696.0 43 3224.0 44 3224.0 45 3224.0 46 3894.0 47 4564.0 48 4564.0 49 4564.0 50 4774.5 51 4985.0 52 4985.0 53 4985.0 54 4465.5 55 3946.0 56 3946.0 57 3946.0 58 3544.5 59 3143.0 60 3143.0 61 3143.0 62 2513.0 63 1883.0 64 1883.0 65 1883.0 66 1523.5 67 1164.0 68 1164.0 69 1164.0 70 887.5 71 611.0 72 611.0 73 611.0 74 445.0 75 279.0 76 279.0 77 279.0 78 182.5 79 86.0 80 86.0 81 86.0 82 58.0 83 30.0 84 30.0 85 30.0 86 16.5 87 3.0 88 3.0 89 3.0 90 3.5 91 4.0 92 4.0 93 4.0 94 3.0 95 2.0 96 2.0 97 2.0 98 4.5 99 7.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0031293027913380897 2 0.0 3 0.0 4 0.0 5 0.02190511953936663 6 0.04381023907873326 7 0.0938790837401427 8 0.0938790837401427 9 0.11578420327950933 10 0.12830141444486168 11 0.14081862561021405 12 0.12830141444486168 13 0.11578420327950933 14 0.10326699211415696 15 0.12830141444486168 16 0.11578420327950933 17 0.11578420327950933 18 0.10639629490549506 19 0.10639629490549506 20 0.07823256978345225 21 0.07823256978345225 22 0.08136187257479034 23 0.08762047815746651 24 0.08136187257479034 25 0.07823256978345225 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 31956.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.876455125797975 #Duplication Level Percentage of deduplicated Percentage of total 1 74.28494187618276 42.99349105019402 2 14.944579616112463 17.298785830516962 3 5.223033252230333 9.068719489297784 4 2.1303054879697214 4.93178119914883 5 1.1624763449580968 3.3640005006884466 6 0.5298729386320626 1.840030041306797 7 0.32441200324412006 1.3143071723619977 8 0.259529602595296 1.2016522718738265 9 0.20005406866720737 1.0420578295155838 >10 0.8596918085969182 8.524220803604956 >50 0.032441200324412 1.1641006383777694 >100 0.04325493376588267 5.576417574164476 >500 0.005406866720735334 1.6804355989485542 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAA 537 1.6804355989485542 No Hit GTATCAACGCAGAGTACTTTTTTTT 400 1.251721116535236 No Hit TATCAACGCAGAGTACTTTTTTTTT 324 1.0138941043935412 No Hit GGTATCAACGCAGAGTACTTTTTTT 235 0.7353861559644511 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 200 0.625860558267618 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 194 0.6070847415195894 No Hit GTACATGGGGTGGTATCAACGCAAA 167 0.522593566153461 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 140 0.43810239078733254 No Hit GTATCAACGCAGAGTACATGGGGTG 122 0.38177494054324695 No Hit TATCAACGCAGAGTACATGGGGTGG 84 0.26286143447239957 No Hit GGTATCAACGCAGAGTACATGGGGT 70 0.21905119539366627 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 60 0.1877581674802854 No Hit ATCAACGCAGAGTACTTTTTTTTTT 55 0.17211165352359495 No Hit GTACATGGGTGGTATCAACGCAAAA 52 0.16272374514958068 No Hit ACGCAGAGTACATGGGGTGGTATCA 51 0.15959444235824258 No Hit CATCAGGATCGGTCGATGGTGCAGG 48 0.1502065339842283 No Hit CAAGTAGAGTGATCGAAAGATGAAA 45 0.14081862561021405 No Hit GGCTATAACACTCCCCGAGGGGAGC 45 0.14081862561021405 No Hit GTATCAACGCAGAGTACATGGGCAG 42 0.13143071723619978 No Hit GTATCAACGCAGAGTACATGGGTGG 41 0.12830141444486168 No Hit GTTATAGCCTGTGGTGATGCGGCGC 40 0.1251721116535236 No Hit GTGCTGGAAGGCGCCGGCCGTGAAG 35 0.10952559769683314 No Hit GTCCTAGACAGTCCTTGAAAAACCG 34 0.10639629490549506 No Hit GGTATCAACGCAGAGTACATGGGCA 34 0.10639629490549506 No Hit GTATCAACGCAGAGTACATGGGAGT 32 0.10013768932281887 No Hit ATTCCATTCCATTCCATTCCATTCC 32 0.10013768932281887 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCAAA 65 7.6900714E-4 11.685566 19 GGGGTGG 75 1.9373368E-4 11.411285 7 AACGCAA 70 0.0014302563 10.8508835 18 TGGGGTG 80 3.5250554E-4 10.69808 6 GGTGGTA 80 3.5250554E-4 10.69808 9 GGGTGGT 100 2.5445997E-4 9.509404 8 ATGGGGT 95 0.0017330205 8.994811 5 TGGTATC 105 0.0042329095 8.150918 11 GTGGTAT 105 0.0042329095 8.150918 10 CATGGGG 140 9.511331E-5 8.138163 4 ACATGGG 300 9.0221874E-10 7.2791343 3 TACATGG 300 9.0221874E-10 7.2791343 2 GGTATCA 190 5.6424295E-5 6.9959645 1 GTACATG 300 7.1213435E-9 6.9626503 1 GTATCAA 270 4.3401815E-7 6.681331 1 AACGCAG 275 4.152511E-6 6.2243376 6 TATCAAC 320 7.995181E-6 5.637373 2 ATCAACG 325 1.0386362E-5 5.550644 3 TCAACGC 330 1.3428991E-5 5.4665437 4 CAACGCA 335 1.728348E-5 5.384953 5 >>END_MODULE